prot_H-paniculata_contig60987.13797.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig60987.13797.1
Unique Nameprot_H-paniculata_contig60987.13797.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length62
Homology
BLAST of mRNA_H-paniculata_contig60987.13797.1 vs. uniprot
Match: A0A6H5K988_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K988_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 2.190e-23
Identity = 48/62 (77.42%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    1 FTQLNSQGVYCSLYTGQEKRSVPFATHVSCTIEMASLTQPFEVAVIDEIQMVDDPQRGQNWT 62
            + QLNSQGVYCSL TGQEKR VPFATHVSCTIEMAS    +EVAVIDEIQM+ D QRG +WT
Sbjct:  548 YEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWT 609          
BLAST of mRNA_H-paniculata_contig60987.13797.1 vs. uniprot
Match: D8LD59_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD59_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 2.200e-23
Identity = 48/62 (77.42%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    1 FTQLNSQGVYCSLYTGQEKRSVPFATHVSCTIEMASLTQPFEVAVIDEIQMVDDPQRGQNWT 62
            + QLNSQGVYCSL TGQEKR VPFATHVSCTIEMAS    +EVAVIDEIQM+ D QRG +WT
Sbjct:  620 YEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWT 681          
BLAST of mRNA_H-paniculata_contig60987.13797.1 vs. uniprot
Match: A0A6G0X0Y1_9STRA (RNA helicase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0Y1_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.110e-20
Identity = 40/62 (64.52%), Postives = 49/62 (79.03%), Query Frame = 0
Query:    1 FTQLNSQGVYCSLYTGQEKRSVPFATHVSCTIEMASLTQPFEVAVIDEIQMVDDPQRGQNWT 62
            +  LN  GVYCSL TG+EKR +P ATHVSCT+EM S T P++VAV+DEIQM+ DP+RG  WT
Sbjct:  241 YETLNMDGVYCSLITGEEKREIPLATHVSCTVEMCSSTTPYDVAVVDEIQMIGDPERGWAWT 302          
BLAST of mRNA_H-paniculata_contig60987.13797.1 vs. uniprot
Match: A0A7S2CVW9_9STRA (RNA helicase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CVW9_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 3.020e-20
Identity = 36/62 (58.06%), Postives = 50/62 (80.65%), Query Frame = 0
Query:    1 FTQLNSQGVYCSLYTGQEKRSVPFATHVSCTIEMASLTQPFEVAVIDEIQMVDDPQRGQNWT 62
            + +LN  GVYC+L TGQEK+ VPFA HV+CT+EM S+++ ++VAVIDEIQM+ +  RG +WT
Sbjct:   33 YEELNRDGVYCTLVTGQEKKEVPFAKHVACTMEMTSISETYDVAVIDEIQMIGNSSRGHSWT 94          
BLAST of mRNA_H-paniculata_contig60987.13797.1 vs. uniprot
Match: A0A6I9S3R6_ELAGV (RNA helicase n=2 Tax=Cocoseae TaxID=169705 RepID=A0A6I9S3R6_ELAGV)

HSP 1 Score: 91.7 bits (226), Expect = 3.870e-20
Identity = 42/62 (67.74%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 FTQLNSQGVYCSLYTGQEKRSVPFATHVSCTIEMASLTQPFEVAVIDEIQMVDDPQRGQNWT 62
            F ++NS GVYCSL+TGQEK+SVPF+ HV+CTIEM S  Q ++VAVIDEIQM+ DP RG  WT
Sbjct:  284 FDKVNSLGVYCSLHTGQEKKSVPFSNHVACTIEMVSTEQLYDVAVIDEIQMMADPTRGYAWT 345          
BLAST of mRNA_H-paniculata_contig60987.13797.1 vs. uniprot
Match: A0A329RZ63_9STRA (RNA helicase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RZ63_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 5.300e-20
Identity = 39/62 (62.90%), Postives = 53/62 (85.48%), Query Frame = 0
Query:    1 FTQLNSQGVYCSLYTGQEKRSVPFATHVSCTIEMASLTQPFEVAVIDEIQMVDDPQRGQNWT 62
            F ++NS G+Y SL TGQEK+ VP++THVSCT+EMA++ +P++VAVIDEIQ++ DPQRG  WT
Sbjct:  242 FERMNSDGLYTSLVTGQEKKLVPYSTHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWT 303          
BLAST of mRNA_H-paniculata_contig60987.13797.1 vs. uniprot
Match: A0A3M6VRU9_9STRA (RNA helicase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRU9_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 7.220e-20
Identity = 39/62 (62.90%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    1 FTQLNSQGVYCSLYTGQEKRSVPFATHVSCTIEMASLTQPFEVAVIDEIQMVDDPQRGQNWT 62
            F ++NS G Y SL TGQEK+ VP++THVSCT+EMA++ +P++VAVIDEIQ++ DPQRG  WT
Sbjct:  239 FERMNSDGFYTSLVTGQEKKMVPYSTHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWT 300          
BLAST of mRNA_H-paniculata_contig60987.13797.1 vs. uniprot
Match: A0A3R7GQW8_9STRA (RNA helicase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GQW8_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 9.840e-20
Identity = 39/62 (62.90%), Postives = 53/62 (85.48%), Query Frame = 0
Query:    1 FTQLNSQGVYCSLYTGQEKRSVPFATHVSCTIEMASLTQPFEVAVIDEIQMVDDPQRGQNWT 62
            F +LNS G+Y SL TGQEK+ VP+++HVSCT+EMA++ +P++VAVIDEIQ++ DPQRG  WT
Sbjct:  172 FERLNSDGLYTSLVTGQEKKIVPYSSHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWT 233          
BLAST of mRNA_H-paniculata_contig60987.13797.1 vs. uniprot
Match: D0NHU6_PHYIT (RNA helicase n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NHU6_PHYIT)

HSP 1 Score: 90.5 bits (223), Expect = 9.870e-20
Identity = 38/62 (61.29%), Postives = 53/62 (85.48%), Query Frame = 0
Query:    1 FTQLNSQGVYCSLYTGQEKRSVPFATHVSCTIEMASLTQPFEVAVIDEIQMVDDPQRGQNWT 62
            F +LN+ G+Y SL TGQEK+ VP++THVSCT+EMA++ +P++VAV+DEIQ++ DPQRG  WT
Sbjct:  304 FERLNADGLYTSLVTGQEKKLVPYSTHVSCTVEMANINRPWDVAVVDEIQLIGDPQRGWAWT 365          
BLAST of mRNA_H-paniculata_contig60987.13797.1 vs. uniprot
Match: G4YHR7_PHYSP (RNA helicase n=5 Tax=Phytophthora TaxID=4783 RepID=G4YHR7_PHYSP)

HSP 1 Score: 90.1 bits (222), Expect = 1.340e-19
Identity = 38/62 (61.29%), Postives = 53/62 (85.48%), Query Frame = 0
Query:    1 FTQLNSQGVYCSLYTGQEKRSVPFATHVSCTIEMASLTQPFEVAVIDEIQMVDDPQRGQNWT 62
            + ++NS G+Y SL TGQEK+ VP++THVSCT+EMA++ +P++VAVIDEIQ++ DPQRG  WT
Sbjct:  157 YERMNSDGLYTSLVTGQEKKIVPYSTHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWT 218          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig60987.13797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K988_9PHAE2.190e-2377.42RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LD59_ECTSI2.200e-2377.42RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6G0X0Y1_9STRA1.110e-2064.52RNA helicase n=1 Tax=Aphanomyces euteiches TaxID=1... [more]
A0A7S2CVW9_9STRA3.020e-2058.06RNA helicase (Fragment) n=1 Tax=Dictyocha speculum... [more]
A0A6I9S3R6_ELAGV3.870e-2067.74RNA helicase n=2 Tax=Cocoseae TaxID=169705 RepID=A... [more]
A0A329RZ63_9STRA5.300e-2062.90RNA helicase n=1 Tax=Phytophthora cactorum TaxID=2... [more]
A0A3M6VRU9_9STRA7.220e-2062.90RNA helicase n=1 Tax=Peronospora effusa TaxID=5428... [more]
A0A3R7GQW8_9STRA9.840e-2062.90RNA helicase n=4 Tax=Phytophthora kernoviae TaxID=... [more]
D0NHU6_PHYIT9.870e-2061.29RNA helicase n=2 Tax=Phytophthora infestans TaxID=... [more]
G4YHR7_PHYSP1.340e-1961.29RNA helicase n=5 Tax=Phytophthora TaxID=4783 RepID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..62
e-value: 2.6E-15
score: 58.1
NoneNo IPR availablePANTHERPTHR12131:SF1ATP-DEPENDENT RNA HELICASE SUPV3L1, MITOCHONDRIALcoord: 1..62
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 1..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig60987contigH-paniculata_contig60987:603..788 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig60987.13797.1mRNA_H-paniculata_contig60987.13797.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig60987 603..788 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig60987.13797.1 ID=prot_H-paniculata_contig60987.13797.1|Name=mRNA_H-paniculata_contig60987.13797.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=62bp
FTQLNSQGVYCSLYTGQEKRSVPFATHVSCTIEMASLTQPFEVAVIDEIQ
MVDDPQRGQNWT
back to top