prot_H-paniculata_contig60304.13708.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig60304.13708.1
Unique Nameprot_H-paniculata_contig60304.13708.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length190
Homology
BLAST of mRNA_H-paniculata_contig60304.13708.1 vs. uniprot
Match: A0A7S4JKW8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JKW8_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 6.980e-21
Identity = 66/171 (38.60%), Postives = 100/171 (58.48%), Query Frame = 0
Query:   24 QLLVHHHSQDTHLRCSPIVQLDRALRRLCLLRHRIPRRSEPVTAQCEVS---GERALHVLHHSQLQETDERHDLGETRRRDLRQSRHTVRHVGE-RD-ARRGGQHAGQTGVLLGQ-VTSDGEHSNATMLYLHVPKAVESLLVGVGQHTERVEKAERGLGADLGLESHLHGG 188
            +L V H  +D H   + +VQL+  L  L L+R  +P   E V A+       G     +LHH++L+ETDE  DL E+  RD  +S  ++  +GE R+   R  + + +   + G  +  +GE S+A +L L+V +AVESLLVGVG+H +R+E +ERGLGA+L L+    GG
Sbjct:   23 KLFVDHEPEDAHHSGAAVVQLNSTLGGLLLIREGVPPEIEGVVAEVTNELPRGSTVGGILHHNELEETDEEEDLDESNSRDGIRSEESLEPIGEVRELVSRQVEVSREVDAVAGSDLAEEGELSDAAVLDLNVTEAVESLLVGVGEHAKRIEASERGLGAELALKGVQGGG 193          
BLAST of mRNA_H-paniculata_contig60304.13708.1 vs. uniprot
Match: A0A7S4R7G8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R7G8_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.500e-5
Identity = 47/130 (36.15%), Postives = 70/130 (53.85%), Query Frame = 0
Query:   79 VLHHSQLQETDERHDLGETRRRDLRQSRHTVRHVGERDARRGGQHAGQTGVLLGQ-----VTSDG-----EHSNATMLYLHVPKAVESLLVGVGQHTERVEKAERGLGADLGLE--------SHLHGGRG 190
            VLHH +L+E +E +DL +T   D   S      VG R         G TG + G      VT D      + ++ ++L L+V +AVE+LLVG+G+H +RV++ +R LGA L L+        S+L GG+G
Sbjct:    2 VLHHEELKEANEGNDLEKTSLGDGVVSEKGSNTVGVRVK-------GVTGHIDGSRKVDSVTGDNLSKECKLTDTSVLDLNVTEAVETLLVGIGEHAKRVKETKRRLGAKLVLKGVEGGGGLSNLSGGKG 124          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig60304.13708.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S4JKW8_9STRA6.980e-2138.60Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S4R7G8_9STRA1.500e-536.15Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig60304contigH-paniculata_contig60304:382..951 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig60304.13708.1mRNA_H-paniculata_contig60304.13708.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig60304 2..951 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig60304.13708.1 ID=prot_H-paniculata_contig60304.13708.1|Name=mRNA_H-paniculata_contig60304.13708.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=190bp
MVYASVEGVRRADQVVDNVGLVRQLLVHHHSQDTHLRCSPIVQLDRALRR
LCLLRHRIPRRSEPVTAQCEVSGERALHVLHHSQLQETDERHDLGETRRR
DLRQSRHTVRHVGERDARRGGQHAGQTGVLLGQVTSDGEHSNATMLYLHV
PKAVESLLVGVGQHTERVEKAERGLGADLGLESHLHGGRG
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