prot_H-paniculata_contig6013.13691.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6013.13691.1
Unique Nameprot_H-paniculata_contig6013.13691.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length75
Homology
BLAST of mRNA_H-paniculata_contig6013.13691.1 vs. uniprot
Match: D7FM71_ECTSI (60S ribosomal protein L38 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM71_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 8.650e-38
Identity = 63/70 (90.00%), Postives = 68/70 (97.14%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKSNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            PKQIHDIRDFLQKARRRDAKSVKIK+NKAT+STKFKIRC+RYLYTLCVTDKEKADKLTQSLPPGL K+ +
Sbjct:    2 PKQIHDIRDFLQKARRRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLTQSLPPGLHKKQL 71          
BLAST of mRNA_H-paniculata_contig6013.13691.1 vs. uniprot
Match: A0A836CJ21_9STRA (Ribosomal protein L38 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ21_9STRA)

HSP 1 Score: 111 bits (278), Expect = 8.330e-31
Identity = 56/70 (80.00%), Postives = 63/70 (90.00%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKSNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            PKQIHDIRDFLQKARR+DAKSVKIK  K    TKFKIRC+RYLYTLCV DK+KADKLTQSLPPGL++++I
Sbjct:    2 PKQIHDIRDFLQKARRKDAKSVKIK--KTAEVTKFKIRCSRYLYTLCVADKDKADKLTQSLPPGLQRKDI 69          
BLAST of mRNA_H-paniculata_contig6013.13691.1 vs. uniprot
Match: W2IQQ0_PHYPR (60S ribosomal protein L38 n=16 Tax=Peronosporaceae TaxID=4777 RepID=W2IQQ0_PHYPR)

HSP 1 Score: 104 bits (259), Expect = 6.590e-28
Identity = 53/70 (75.71%), Postives = 62/70 (88.57%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKSNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            PKQI DIRDFLQKARR+DA+SVKIK  K+    KFKIRC++YLYTLCVTD EKADKLTQSLPPGL++++I
Sbjct:    2 PKQITDIRDFLQKARRKDARSVKIK--KSDKVVKFKIRCSKYLYTLCVTDTEKADKLTQSLPPGLQRKDI 69          
BLAST of mRNA_H-paniculata_contig6013.13691.1 vs. uniprot
Match: A0A485KGK6_9STRA (Aste57867_4412 protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KGK6_9STRA)

HSP 1 Score: 104 bits (259), Expect = 6.590e-28
Identity = 53/70 (75.71%), Postives = 61/70 (87.14%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKSNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            PKQI DIRDFLQKARR+DA+SVKIK  K     KFKIRC++YLYTLCVTD EKADKLTQSLPPGL++++I
Sbjct:    2 PKQITDIRDFLQKARRKDARSVKIK--KTAQVVKFKIRCSKYLYTLCVTDTEKADKLTQSLPPGLQRKDI 69          
BLAST of mRNA_H-paniculata_contig6013.13691.1 vs. uniprot
Match: A0A067CFE6_SAPPC (60S ribosomal protein L38 n=3 Tax=Oomycota TaxID=4762 RepID=A0A067CFE6_SAPPC)

HSP 1 Score: 103 bits (258), Expect = 9.360e-28
Identity = 53/70 (75.71%), Postives = 61/70 (87.14%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKSNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            PKQI DIRDFLQKARR+DA+SVKIK  K     KFKIRC++YLYTLCVTD EKADKLTQSLPPGL++++I
Sbjct:    2 PKQITDIRDFLQKARRKDARSVKIK--KTPQVVKFKIRCSKYLYTLCVTDTEKADKLTQSLPPGLQRKDI 69          
BLAST of mRNA_H-paniculata_contig6013.13691.1 vs. uniprot
Match: A0A1E7ETU4_9STRA (Ribosomal protein L38 n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7ETU4_9STRA)

HSP 1 Score: 103 bits (258), Expect = 9.360e-28
Identity = 54/70 (77.14%), Postives = 61/70 (87.14%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKSNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            PKQI DIRDFLQKARR DAK VKIK  K  + TKFKIRC+R+LYTLCVTD EKADKLTQSLPPGL++++I
Sbjct:    2 PKQITDIRDFLQKARRSDAKLVKIK--KRDSQTKFKIRCSRFLYTLCVTDAEKADKLTQSLPPGLQRKSI 69          
BLAST of mRNA_H-paniculata_contig6013.13691.1 vs. uniprot
Match: M4BFU5_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BFU5_HYAAE)

HSP 1 Score: 104 bits (259), Expect = 1.120e-27
Identity = 53/70 (75.71%), Postives = 62/70 (88.57%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKSNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            PKQI DIRDFLQKARR+DA+SVKIK  K+    KFKIRC++YLYTLCVTD EKADKLTQSLPPGL++++I
Sbjct:   21 PKQITDIRDFLQKARRKDARSVKIK--KSDKVVKFKIRCSKYLYTLCVTDTEKADKLTQSLPPGLQRKDI 88          
BLAST of mRNA_H-paniculata_contig6013.13691.1 vs. uniprot
Match: F0Y0E5_AURAN (Ribosomal protein L38 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0E5_AURAN)

HSP 1 Score: 101 bits (252), Expect = 7.700e-27
Identity = 53/70 (75.71%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKSNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            PK+I DIRDFLQKARRRDAKSVKIK  K     KFKIRC+RYLYTL V+D EKADKLTQSLPPGL++++I
Sbjct:    2 PKEISDIRDFLQKARRRDAKSVKIKKTKGV--VKFKIRCSRYLYTLRVSDTEKADKLTQSLPPGLQRKDI 69          
BLAST of mRNA_H-paniculata_contig6013.13691.1 vs. uniprot
Match: K3WQ98_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQ98_GLOUD)

HSP 1 Score: 101 bits (252), Expect = 8.830e-27
Identity = 53/70 (75.71%), Postives = 61/70 (87.14%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKSNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            PKQI DIRDFLQKARR+DA+SVKIK  KA    KFKIRC++YLYTL VTD EKADKLTQSLPPGL++++I
Sbjct:    7 PKQITDIRDFLQKARRKDARSVKIK--KADKVVKFKIRCSKYLYTLVVTDAEKADKLTQSLPPGLQRKDI 74          
BLAST of mRNA_H-paniculata_contig6013.13691.1 vs. uniprot
Match: M4BFU6_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BFU6_HYAAE)

HSP 1 Score: 101 bits (251), Expect = 1.250e-26
Identity = 52/70 (74.29%), Postives = 59/70 (84.29%), Query Frame = 0
Query:    2 PKQIHDIRDFLQKARRRDAKSVKIKSNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            PKQI DIRDFLQKARR+DA+SVKIK  K+    KFKIRC++YLYTLCVTD EKADKLTQSLPPG +  N+
Sbjct:    2 PKQITDIRDFLQKARRKDARSVKIK--KSDKVVKFKIRCSKYLYTLCVTDTEKADKLTQSLPPGAQLTNL 69          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6013.13691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM71_ECTSI8.650e-3890.0060S ribosomal protein L38 n=2 Tax=Ectocarpus TaxID... [more]
A0A836CJ21_9STRA8.330e-3180.00Ribosomal protein L38 n=1 Tax=Tribonema minus TaxI... [more]
W2IQQ0_PHYPR6.590e-2875.7160S ribosomal protein L38 n=16 Tax=Peronosporaceae... [more]
A0A485KGK6_9STRA6.590e-2875.71Aste57867_4412 protein n=3 Tax=Saprolegniaceae Tax... [more]
A0A067CFE6_SAPPC9.360e-2875.7160S ribosomal protein L38 n=3 Tax=Oomycota TaxID=4... [more]
A0A1E7ETU4_9STRA9.360e-2877.14Ribosomal protein L38 n=2 Tax=Bacillariaceae TaxID... [more]
M4BFU5_HYAAE1.120e-2775.71Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
F0Y0E5_AURAN7.700e-2775.71Ribosomal protein L38 n=1 Tax=Aureococcus anophage... [more]
K3WQ98_GLOUD8.830e-2775.71Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
M4BFU6_HYAAE1.250e-2674.29Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038464Ribosomal protein L38e superfamilyGENE3D3.30.720.90coord: 1..72
e-value: 4.7E-32
score: 111.9
IPR002675Ribosomal protein L38ePFAMPF01781Ribosomal_L38ecoord: 2..71
e-value: 4.7E-34
score: 116.3
IPR002675Ribosomal protein L38ePANTHERPTHR1096560S RIBOSOMAL PROTEIN L38coord: 2..70
NoneNo IPR availablePRODOMPD010361coord: 1..66
e-value: 4.0E-22
score: 253.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6013contigH-paniculata_contig6013:8437..10833 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6013.13691.1mRNA_H-paniculata_contig6013.13691.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6013 8437..10833 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6013.13691.1 ID=prot_H-paniculata_contig6013.13691.1|Name=mRNA_H-paniculata_contig6013.13691.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp
QPKQIHDIRDFLQKARRRDAKSVKIKSNKATNSTKFKIRCTRYLYTLCVT
DKEKADKLTQSLPPGLRKQNINID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038464Ribosomal_L38e_sf
IPR002675Ribosomal_L38e