prot_H-paniculata_contig60.13668.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig60.13668.1
Unique Nameprot_H-paniculata_contig60.13668.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length396
Homology
BLAST of mRNA_H-paniculata_contig60.13668.1 vs. uniprot
Match: D7FN61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN61_ECTSI)

HSP 1 Score: 309 bits (791), Expect = 1.020e-95
Identity = 181/364 (49.73%), Postives = 224/364 (61.54%), Query Frame = 0
Query:   33 VTDFDVTYGNALAPAGFHRVTTRQGGSANLHAQYQGGSTSQSFLWTHESASRGDPVVEVRVTYDSEPGPEKFTKVSRDLAKGGASGRKAYLWLRRQPRRGSDFSNASSPEVALAALSSGEPTAQNSTELKVRGHEVTGAESDPDGTRSTPGSEQESISPLLPLSEVVVGFGPADPNAEDTAELAAAEAAEKEGRASDAGGSDARRRRVRTRRPWERLGRSLNPEAESA-------DTEDSGKAEGVFLWYRRGTEDESLPWSSSSLTVGDCLDARDNVGNWCVAQVVNIDGEKLRVHFEGWNSTFDEDIRMGSPKLAKLGAYTSGRDTGRISRRLGTPWEVTPDQVCVLTRGIKNIVPRIVRDG 389
            VTDFDVTYG+ALAPAGFHR TTR GGSANL+      S+ QSFLWTHE  SRG+PVV+V VTYD EPGPE F +VSRDLAKGG SGRKA+LWL+R  ++         P  A A       TA +  + +                       +E  S +LP+ EVVV FG +DPN E+  E A  E A   G    AGG        R  R WERL RSLNP    A                 VFLW+RR +E+E L WS+ SLTVGD LDARD+ G WCVAQVV I+GE +RVHF+G++S +DEDIR+ S KLAKLG +TSGRDTG+ +RR G PW +TP++V  + R +K ++P ++R+G
Sbjct:    6 VTDFDVTYGSALAPAGFHRTTTRVGGSANLNTT---ASSQQSFLWTHEGLSRGNPVVQVSVTYDDEPGPEGFERVSRDLAKGGTSGRKAFLWLKRHAQQ--------IPRTASA-------TALD--QRRXXXXXXXXXXXXXXXXXXXXXXXEEGDSGVLPIGEVVVAFGSSDPNVEEATEAAEQERAA--GAVDGAGGEGGSVEERRVVRVWERLDRSLNPSTAVAAXXXXXXXXXXXXXXXAVFLWFRRVSEEEPLSWSAHSLTVGDWLDARDSDGTWCVAQVVRIEGESMRVHFQGYHSRYDEDIRVESLKLAKLGTHTSGRDTGQSTRRPGAPWGITPNEVRDVIRRVKGLLPEVLREG 347          
BLAST of mRNA_H-paniculata_contig60.13668.1 vs. uniprot
Match: A0A4D9CLS1_9STRA (USP domain-containing protein n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLS1_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.300e-15
Identity = 45/95 (47.37%), Postives = 64/95 (67.37%), Query Frame = 0
Query:   33 VTDFDVTYGNALAPAGFHRVTTRQGGSANLHAQYQGGSTSQSFLWTHESASRGDPVVEVRVTYDSEPGPEKFTKVSRDLAKGGASGRKAYLWLRR 127
            + DFDVTYG+ALAPAGF R TT     A++ A   G    ++FLW H+  +RG+P+V V V Y+ EP P+ F KV+RD++KG  S ++++L  RR
Sbjct:    3 IRDFDVTYGDALAPAGFSRATTPAKDCADISAGATGSGAGRTFLWYHKGLNRGEPIVAVDVIYEDEPVPQGFVKVARDMSKG--SHQRSFLCFRR 95          
BLAST of mRNA_H-paniculata_contig60.13668.1 vs. uniprot
Match: A0A836CI44_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI44_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.040e-12
Identity = 43/96 (44.79%), Postives = 63/96 (65.62%), Query Frame = 0
Query:   33 VTDFDVTYGNALAPAGFHRVTTRQGGSANLH-AQYQGGSTSQSFLWTHESASRGDPVVEVRVTYDSEPGPEKFTKVSRDLAKGGASGRKAYLWLRR 127
            +T FDVT+G+ALA AG+HR T   GG+AN++ +  + G +SQSFLW  +  S+  PVV+V+V YD EP P  + KV R +    +  R ++L L+R
Sbjct:    1 ITGFDVTFGSALAAAGYHRTTLHDGGTANINRSNDKQGVSSQSFLWYCDVPSKLGPVVDVQVLYDDEPTPPGWEKVPRSMVV--SDKRSSHLCLKR 94          
BLAST of mRNA_H-paniculata_contig60.13668.1 vs. uniprot
Match: A0A7S2I6X1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2I6X1_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 3.830e-6
Identity = 32/69 (46.38%), Postives = 42/69 (60.87%), Query Frame = 0
Query:  293 VGDCLDARDNVGNWCVAQVVNIDGE----KLRVHFEGWNSTFDEDI---RMGSPKLAKLGAYTSGRDTG 354
            VGD L+ARD+ G+W  A+VV I GE    K++VHF GWNS FDE +   R+    L+ +GA     D G
Sbjct:   31 VGDRLEARDSRGDWYEARVVEIYGEGVERKVKVHFHGWNSRFDEWVTAERLRPIGLSAVGAMEETADDG 99          
BLAST of mRNA_H-paniculata_contig60.13668.1 vs. uniprot
Match: A0A1W0A1T5_9STRA (Ubiquitin-specific protease n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1T5_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.760e-5
Identity = 27/67 (40.30%), Postives = 43/67 (64.18%), Query Frame = 0
Query:  282 ESLPWSSSSLTVGDCLDARDNVGNWCVAQVVNIDGEKLRVHFEGWNSTFDEDIRMGSPKLAKLGAYT 348
            E+  W +  L  GD +DA+D   +W  +++V +D  K++VHF  W+S FDE I + S KLA+L ++T
Sbjct:  230 ENFGWRAV-LGPGDYVDAQDKQDDWFESKIVEVDENKVKVHFCSWHSKFDEVIDIDSEKLARLHSHT 295          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig60.13668.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FN61_ECTSI1.020e-9549.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D9CLS1_9STRA1.300e-1547.37USP domain-containing protein n=5 Tax=Monodopsidac... [more]
A0A836CI44_9STRA1.040e-1244.79Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S2I6X1_9EUKA3.830e-646.38Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A1W0A1T5_9STRA4.760e-540.30Ubiquitin-specific protease n=1 Tax=Thraustotheca ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 285..344
e-value: 9.3E-15
score: 56.3
IPR004092Mbt repeatPFAMPF02820MBTcoord: 301..345
e-value: 1.2E-4
score: 22.4
IPR023341MABP domainPROSITEPS51498MABPcoord: 30..182
score: 9.477
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 289..348

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig60contigH-paniculata_contig60:50322..57770 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig60.13668.1mRNA_H-paniculata_contig60.13668.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig60 50322..57770 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig60.13668.1 ID=prot_H-paniculata_contig60.13668.1|Name=mRNA_H-paniculata_contig60.13668.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=396bp
ELCDTLVFTLTPGYRDTVPPDRVNPFHRAMPFVTDFDVTYGNALAPAGFH
RVTTRQGGSANLHAQYQGGSTSQSFLWTHESASRGDPVVEVRVTYDSEPG
PEKFTKVSRDLAKGGASGRKAYLWLRRQPRRGSDFSNASSPEVALAALSS
GEPTAQNSTELKVRGHEVTGAESDPDGTRSTPGSEQESISPLLPLSEVVV
GFGPADPNAEDTAELAAAEAAEKEGRASDAGGSDARRRRVRTRRPWERLG
RSLNPEAESADTEDSGKAEGVFLWYRRGTEDESLPWSSSSLTVGDCLDAR
DNVGNWCVAQVVNIDGEKLRVHFEGWNSTFDEDIRMGSPKLAKLGAYTSG
RDTGRISRRLGTPWEVTPDQVCVLTRGIKNIVPRIVRDGGGAGAGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004092Mbt
IPR023341MABP
IPR016197Chromo-like_dom_sf