prot_H-paniculata_contig59797.13628.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig59797.13628.1
Unique Name	prot_H-paniculata_contig59797.13628.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	166

Homology

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BLAST of mRNA_H-paniculata_contig59797.13628.1 vs. uniprot
Match: A0A444Y0U9_ARAHY (Integrase catalytic domain-containing protein n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444Y0U9_ARAHY)

HSP 1 Score: 55.8 bits (133), Expect = 5.060e-6
Identity = 32/99 (32.32%), Postives = 54/99 (54.55%), Query Frame = 0

Query:   10 HAAWTALGEKYLNSSMQRRRLLMRQLDT-KVMGPSQDPDEYLTEIFYLRDELAYIGETFSEGRITEIILEGLTDDYDQ-ITYAAERDPDFSLKDMETTM 106
            H  W+ L   +++ +  R R L  QL + K  GP+ D   YL +I  + D LA +G   ++   T +IL+GL +DY   +TY   +DP +S+ ++E  +
Sbjct:  119 HDIWSRLHTHFVSQTKARIRQLQLQLKSIKKTGPASD---YLLQIKKVVDALATVGAPLTDAEYTNVILDGLNEDYQSFLTYVTAKDPPYSIPNLEALL 214

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BLAST of mRNA_H-paniculata_contig59797.13628.1 vs. uniprot
Match: UPI0010FC5D7A (uncharacterized protein LOC114925294 n=1 Tax=Arachis hypogaea TaxID=3818 RepID=UPI0010FC5D7A)

HSP 1 Score: 55.5 bits (132), Expect = 5.820e-6
Identity = 32/99 (32.32%), Postives = 54/99 (54.55%), Query Frame = 0

Query:   10 HAAWTALGEKYLNSSMQRRRLLMRQLDT-KVMGPSQDPDEYLTEIFYLRDELAYIGETFSEGRITEIILEGLTDDYDQ-ITYAAERDPDFSLKDMETTM 106
            H  W+ L   + + +  R R L  QL + K +GP+ D   YL +I  + D LA +G   ++   T +IL+GL +DY   +TY   +DP +S+ ++E  +
Sbjct:  168 HDIWSRLHTHFASQTKARIRQLQLQLKSIKKIGPASD---YLLQIKKVVDALAAVGAPLTDAEYTNVILDGLNEDYHSFLTYVTAKDPPYSIPNLEALL 263

[Close]

BLAST of mRNA_H-paniculata_contig59797.13628.1 vs. uniprot
Match: A0A6P4D6A4_ARADU (uncharacterized protein LOC107487032 n=1 Tax=Arachis duranensis TaxID=130453 RepID=A0A6P4D6A4_ARADU)

HSP 1 Score: 55.1 bits (131), Expect = 6.760e-6
Identity = 33/99 (33.33%), Postives = 51/99 (51.52%), Query Frame = 0

Query:   10 HAAWTALGEKYLNSSMQRRRLLMRQLD-TKVMGPSQDPDEYLTEIFYLRDELAYIGETFSEGRITEIILEGLTDDYDQ-ITYAAERDPDFSLKDMETTM 106
            H  W+ L   + + +  R R L  QL   K  GP+ D   YL +I  + D L  +G   ++   T IIL+GL +DY   +TY   +DP +S+ D+E  +
Sbjct:  119 HDIWSRLHTHFASQTKARIRQLQLQLKWIKKTGPASD---YLLQIKKVVDALVTVGAPLTDAEYTNIILDGLNEDYQSFLTYVTAKDPPYSIPDLEALL 214

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig59797.13628.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig59797.13628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A444Y0U9_ARAHY	5.060e-6	32.32	Integrase catalytic domain-containing protein n=1 ...	[more]
UPI0010FC5D7A	5.820e-6	32.32	uncharacterized protein LOC114925294 n=1 Tax=Arach...	[more]
A0A6P4D6A4_ARADU	6.760e-6	33.33	uncharacterized protein LOC107487032 n=1 Tax=Arach...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 9..104 e-value: 8.9E-12 score: 44.9
None	No IPR available	GENE3D	4.10.60.10		coord: 117..166 e-value: 1.9E-6 score: 29.7
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 10..161
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 138..163

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig59797	contig	H-paniculata_contig59797:445..942 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig59797.13628.1	mRNA_H-paniculata_contig59797.13628.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig59797 445..942 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig59797.13628.1 ID=prot_H-paniculata_contig59797.13628.1|Name=mRNA_H-paniculata_contig59797.13628.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=166bp
PEARQLPDGHAAWTALGEKYLNSSMQRRRLLMRQLDTKVMGPSQDPDEYL
TEIFYLRDELAYIGETFSEGRITEIILEGLTDDYDQITYAAERDPDFSLK
DMETTMRNMYANRIARVQISSSRRKGRESAMMASSSAFKGICNYCHKPGH
IKSECRKLKRRQMSSA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036875	Znf_CCHC_sf