prot_H-paniculata_contig587.13479.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig587.13479.1
Unique Nameprot_H-paniculata_contig587.13479.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length128
Homology
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BLAST of mRNA_H-paniculata_contig587.13479.1 vs. uniprot
Match: A0A6H5KZY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY8_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 7.160e-14
Identity = 41/91 (45.05%), Postives = 50/91 (54.95%), Query Frame = 0 
Query:    4 AALLSSEESWFKVSVTCNPWEGWPMRRVLWPLLYTLTDP--------------SRQATSTMDARVLMASVREEILRPLGLCPPW-DKDNLD 79
            A  L+SE+ WF+  V   PWEGW MRRVLWPLL  +T P              SR+       R L +S R ++LRP GLCPPW D+D  D
Sbjct:  938 AERLASEQFWFESRVPSLPWEGWAMRRVLWPLLSLVTAPPPSTTAPGTPGPAGSREQDRAAAVRALASSARRKVLRPAGLCPPWGDEDGGD 1028
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig587.13479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KZY8_9PHAE7.160e-1445.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig587contigH-paniculata_contig587:4126..4913 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig587.13479.1mRNA_H-paniculata_contig587.13479.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig587 4125..4913 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig587.13479.1 ID=prot_H-paniculata_contig587.13479.1|Name=mRNA_H-paniculata_contig587.13479.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=128bp
LFSAALLSSEESWFKVSVTCNPWEGWPMRRVLWPLLYTLTDPSRQATSTM
DARVLMASVREEILRPLGLCPPWDKDNLDHLGQPGGESGDPKHTDILAAD
AVTGGSGGMELARRNAANMAAKIRSSVG
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