prot_H-paniculata_contig57954.13387.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig57954.13387.1
Unique Nameprot_H-paniculata_contig57954.13387.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length160
Homology
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BLAST of mRNA_H-paniculata_contig57954.13387.1 vs. uniprot
Match: A0A6H5JQW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW6_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.690e-12
Identity = 54/167 (32.34%), Postives = 86/167 (51.50%), Query Frame = 0 
Query:    5 SDDNEARINQEVERRVRQEIA----QALEVDRQRRRGMGGAEYIDSEQQPAVAPQQGARTDQAATSSVEDIAHTIARARTGLNTPNLRVGTPLPGM-------FHVSQSSRIEPWTGEVKEKEDLQTKLLVFKSSMYALFGQEGVMEAIQCKTPIRIGREGVDVEEL 160
            ++D +ARIN+ VE RV+Q +A    Q  E +++      G+E+    QQ A  P        +A  +V+DIA T+A A T      L++     G          +++  R+ PW G  ++ ED Q +  +F S+M A+F QEGV E +     I +G EG+D+E+L
Sbjct:   13 AEDEDARINELVEMRVQQRLADMRRQQDEEEQRTENVRTGSEHETRHQQQAGRP--------SANPAVDDIARTLADALTS----RLQISPADTGRVPSSAATLRMTEVKRLAPWDGMYRQGEDEQERFSIFPSNMIAMFAQEGVREVVLSDHIIPVGLEGIDMEDL 167
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BLAST of mRNA_H-paniculata_contig57954.13387.1 vs. uniprot
Match: A0A6H5JR49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR49_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.040e-10
Identity = 48/128 (37.50%), Postives = 70/128 (54.69%), Query Frame = 0 
Query:   41 AEYIDSEQQPAVAPQQGARTDQAATS-----SVEDIAHTIARARTG-LNTPNLRVGT-PLPGMFHVSQSSRIEPWTGEVKEK-EDLQTKLLVFKSSMYALFGQEGVMEAIQCKTPIRIGREGVDVEEL 160
            AE   +E   +   +QGA   Q A S     S +D+ ++IA A  G L T +  +G  P  G   +++S R+ PW G  K++  DLQ KLL+FKSSM A F QEGV E +     I +G+ G ++ +L
Sbjct:   65 AEQQSTEDLRSGTEEQGAPHQQQAGSPSPNPSADDLTNSIANAIAGRLQTSSGDIGAVPHSGALRMTESRRVAPWDGVFKQEGNDLQQKLLIFKSSMVARFAQEGVHEVVMSDEDIPVGKHGANMAQL 192
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig57954.13387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQW6_9PHAE1.690e-1232.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JR49_9PHAE1.040e-1037.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig57954contigH-paniculata_contig57954:513..992 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig57954.13387.1mRNA_H-paniculata_contig57954.13387.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig57954 500..992 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig57954.13387.1 ID=prot_H-paniculata_contig57954.13387.1|Name=mRNA_H-paniculata_contig57954.13387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=160bp
MSQISDDNEARINQEVERRVRQEIAQALEVDRQRRRGMGGAEYIDSEQQP
AVAPQQGARTDQAATSSVEDIAHTIARARTGLNTPNLRVGTPLPGMFHVS
QSSRIEPWTGEVKEKEDLQTKLLVFKSSMYALFGQEGVMEAIQCKTPIRI
GREGVDVEEL
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