prot_H-paniculata_contig5671.13208.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5671.13208.1
Unique Nameprot_H-paniculata_contig5671.13208.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length600
Homology
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BLAST of mRNA_H-paniculata_contig5671.13208.1 vs. uniprot
Match: A0A6H5L229_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L229_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 6.510e-76
Identity = 186/344 (54.07%), Postives = 211/344 (61.34%), Query Frame = 0 
Query:  267 HPGPIDNSALVLEAGAPGTILGVGRRLRMRLVRGYHFVLVPQEAWSALHAWYGGGPVLPRQLVPVKDSTSGHVVYEPQLYPEFSLLDPVLRANSMPLPAASSASSCSTRQNQNRNHPASSSRPDFKDSSCDAATMADGGDDEMPXXXXXXXXXXXXXXXXXXXXXXNGYH-------PGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGL---CAACGRHAKEKCARCHKNSHRVFYCSQSCQEAHWRYHKKLCGGRDPQAALAMAKRGKAGLINLGNTCFLNSAVQCLSHVQPLTQHILTNAFRGDINDSNPLG 600
            HPGPIDNS LVL+AG PGTI G GRRLR+RLVRGYHFVLVPQEAW ALHAWYGGGP LPR LVP++DS SG VVYEPQL+PEFS LDPVLR          SA+ CS+    N +   + S  DF     D   +A+G   E                        NG         P                        XXXXXXXXXXXXXXXXXXXXXXXX         +G     CAACG   K+KC  C K  HRV YCS +CQ+AHWR+HKK CGG+     L++AKRGKAGL NLGNTCFLNSAVQCLSHVQPLT+H+L+NAF+ D+N +NPLG
Sbjct:  724 HPGPIDNSELVLDAGTPGTIPGTGRRLRLRLVRGYHFVLVPQEAWIALHAWYGGGPALPRALVPIRDSDSGRVVYEPQLFPEFSRLDPVLR----------SATVCSSGIVGNNDD--APSNEDFASDKEDGP-IANGSPVEENPLVAEVAAAADSKEDTGGSVDGNGEGGESTGPPPAPTEAASPAPPGAVAEGPQENRSGXXXXXXXXXXXXXXXXXXXXXXXXGSVDKKTKKTGDAWYPCAACGAPCKKKCTSCSKTQHRVSYCSPACQKAHWRFHKKFCGGKGSGTGLSLAKRGKAGLDNLGNTCFLNSAVQCLSHVQPLTRHVLSNAFQEDLNLTNPLG 1054
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BLAST of mRNA_H-paniculata_contig5671.13208.1 vs. uniprot
Match: D7FSH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSH2_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 2.110e-72
Identity = 195/348 (56.03%), Postives = 222/348 (63.79%), Query Frame = 0 
Query:  267 HPGPIDNSALVLEAGAPGTILGVGRRLRMRLVRGYHFVLVPQEAWSALHAWYGGGPVLPRQLVPVKDSTSGHVVYEPQLYPEFSLLDPVLRANSMPLPAASSASSCSTRQNQNRNHPASSSRPDFKDSSCDAATMADGGDDEMPXXXXXXXXXXXXXXXXXXXXXXNGYHPGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGL--------------CAACGRHAKEKCARCHKNSHRVFYCSQSCQEAHWRYHKKLCGGRDPQAALAMAKRGKAGLINLGNTCFLNSAVQCLSHVQPLTQHILTNAFRGDINDSNPLG 600
            HPGPIDNS LVL+AG PGTI G GRRLR+RLVRGYHFVLVPQEAW ALHAWYGGGP LPR LVP++DS SG VV+EPQL+PEFS LDPVLR+      A   +SS     +   N   ++ +P                  E         XXXXXXXX       +G   G            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXX                  CAACG  + +KC  C K  HRV YCS +CQ+AHWR+HKK CGG+   A L++AKRGKAGL NLGNTCFLNSAVQCLSHVQPLT+H+L+NAF+ D+N +NPLG
Sbjct:  662 HPGPIDNSELVLDAGTPGTIPGTGRRLRLRLVRGYHFVLVPQEAWIALHAWYGGGPALPRALVPIRDSDSGRVVFEPQLFPEFSRLDPVLRS------ATVCSSSVVGDNDAPSNEDLANDKPTAXXXXXXXXXXXXXXXXEKSPLVAAAAXXXXXXXXEDTGGSVDGKGVGNGVGGESTEPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQVDRAGGRGXXXXXXXXDKKTKKNEDAWYPCAACGAPSNKKCTSCSKTQHRVSYCSPACQKAHWRFHKKFCGGKGSGAGLSLAKRGKAGLDNLGNTCFLNSAVQCLSHVQPLTRHVLSNAFQEDLNLTNPLG 1003
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BLAST of mRNA_H-paniculata_contig5671.13208.1 vs. uniprot
Match: A0A7S2STD1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STD1_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.860e-22
Identity = 50/106 (47.17%), Postives = 71/106 (66.98%), Query Frame = 0 
Query:  498 LCAACGRHAKEKCARCHKNSHRVFYCSQSCQEAHWRYHKKLC--GGRDPQAALA-MAKRGKAGLINLGNTCFLNSAVQCLSHVQPLTQHILTNAFRGDINDSNPLG 600
             CAAC R A+ KC RC+     V YC++ CQ +HW++HKK C  G  DP   +    +RG  GL+NLGN+C++NSA+ CLSHV P+T+H L+  F+ ++N  NP+G
Sbjct:  319 FCAACNRTAQSKCKRCNF----VVYCNKHCQASHWKFHKKFCLAGVEDPSPKMTPQTRRGFVGLVNLGNSCYMNSAIACLSHVYPITRHFLSGVFKEELNLDNPMG 420
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BLAST of mRNA_H-paniculata_contig5671.13208.1 vs. uniprot
Match: T0RKH9_SAPDV (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RKH9_SAPDV)

HSP 1 Score: 111 bits (278), Expect = 6.830e-22
Identity = 51/106 (48.11%), Postives = 66/106 (62.26%), Query Frame = 0 
Query:  499 CAACGRHAKEKCARCHKNSHRVFYCSQSCQEAHWRYHKKLC----GGRDPQAALAMAKRGKAGLINLGNTCFLNSAVQCLSHVQPLTQHILTNAFRGDINDSNPLG 600
            C  CGR ++ +CA C       +YCS+ CQ AHW+YHK +C    GG    A     +RG+ GL NLGNTCF+N+A+QCLSH   LT H LTN ++ D+N  N LG
Sbjct:  236 CTVCGRPSRNRCAVCKT----PYYCSKQCQSAHWKYHKSVCRVIKGGGSISAVETHGRRGQTGLRNLGNTCFMNAALQCLSHTPVLTAHFLTNLYQADLNTDNVLG 337
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BLAST of mRNA_H-paniculata_contig5671.13208.1 vs. uniprot
Match: A0A7S2A1U5_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A1U5_9STRA)

HSP 1 Score: 108 bits (269), Expect = 8.890e-21
Identity = 55/123 (44.72%), Postives = 72/123 (58.54%), Query Frame = 0 
Query:  497 GLCAACGR-HAKEKCARCHKNSHRVFYCSQSCQEAHWRYHKKLCGGRDP--------QAALAMAKR----------GKAGLINLGNTCFLNSAVQCLSHVQPLTQHILTNAFRGDINDSNPLG 600
            G+CA+C R  AK +C+RC      V YC + CQ +HW YH+ +C             +  + M ++          G+ GL NLGNTCF+NSA+QCLSH  PLT+H LTN FR D+N SNPLG
Sbjct:  174 GVCASCRRIGAKSRCSRCLT----VQYCGRDCQASHWPYHRTICNSAKKKRTSSSKTETEMMMQEQLIISWKDVNWGRVGLNNLGNTCFMNSAIQCLSHAAPLTRHFLTNRFRNDLNSSNPLG 292
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BLAST of mRNA_H-paniculata_contig5671.13208.1 vs. uniprot
Match: M4BGP8_HYAAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BGP8_HYAAE)

HSP 1 Score: 106 bits (265), Expect = 2.620e-20
Identity = 52/113 (46.02%), Postives = 72/113 (63.72%), Query Frame = 0 
Query:  498 LCAACGRH--AKEKCARCHKNSHRVFYCSQSCQEAHWRYHKKLC-----GGRDPQAA---LAMAKRGKAGLINLGNTCFLNSAVQCLSHVQPLTQHILTNAFRGDINDSNPLG 600
            +C AC +   A ++C  CH     ++YC  +CQ +HW+YHK LC      G     A   L + +RGK GL NLGNTCF+NSA+QCLSHV+ LT++ L+N ++ D+N  NPLG
Sbjct:  188 ICGACRKTTGALKRCGSCHM----IWYCGLNCQTSHWKYHKTLCRSKLSAGEKADGAIQKLQVERRGKMGLRNLGNTCFMNSALQCLSHVELLTRYFLSNKYKKDLNHDNPLG 296
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BLAST of mRNA_H-paniculata_contig5671.13208.1 vs. uniprot
Match: A0A7S2S126_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S126_9STRA)

HSP 1 Score: 101 bits (251), Expect = 3.980e-20
Identity = 52/122 (42.62%), Postives = 66/122 (54.10%), Query Frame = 0 
Query:  495 SGGLCAACGR-HAKEKCARCHKNSHRVFYCSQSCQEAHWRYHKKLCGGRDPQAALAM---------------AKRGKAGLINLGNTCFLNSAVQCLSHVQPLTQHILTNAFRGDINDSNPLG 600
            +G  C ACG   A  +C  C      V+YC ++CQ +HW YHK +C     Q                    AK G+ GL NLGNTCF+NSA+QCLSH  PLT+H +  AF+ D+N  NPLG
Sbjct:   23 TGRSCGACGSTKAPSRCTTCMA----VYYCGRTCQASHWPYHKNICNVLQKQIQTMSPATIQHQHKIIHRESAKHGRTGLNNLGNTCFMNSALQCLSHAIPLTRHFINCAFQHDLNTDNPLG 140
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BLAST of mRNA_H-paniculata_contig5671.13208.1 vs. uniprot
Match: A0A067C7Q0_SAPPC (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C7Q0_SAPPC)

HSP 1 Score: 105 bits (263), Expect = 4.950e-20
Identity = 50/111 (45.05%), Postives = 65/111 (58.56%), Query Frame = 0 
Query:  499 CAACGRHAKEKCARCHKNSHRVFYCSQSCQEAHWRYHKKLCGGRDPQAAL---------AMAKRGKAGLINLGNTCFLNSAVQCLSHVQPLTQHILTNAFRGDINDSNPLG 600
            C  CGR ++ +C  C       FYCS+ CQ AHW+YHK +C      AA+            +RG+ GL NLGNTCF+N+A+QCLSH   LT H LTN ++ D+N  N LG
Sbjct:  235 CTVCGRPSRNRCGPCKT----PFYCSKQCQSAHWKYHKSVCRMLVAHAAVDGGSVSVVEVHGRRGQTGLRNLGNTCFMNAALQCLSHTPVLTAHFLTNLYQSDLNTDNVLG 341
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BLAST of mRNA_H-paniculata_contig5671.13208.1 vs. uniprot
Match: A0A1V9ZPK2_9STRA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZPK2_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.200e-19
Identity = 47/106 (44.34%), Postives = 65/106 (61.32%), Query Frame = 0 
Query:  499 CAACGRHAKEKCARCHKNSHRVFYCSQSCQEAHWRYHKKLC----GGRDPQAALAMAKRGKAGLINLGNTCFLNSAVQCLSHVQPLTQHILTNAFRGDINDSNPLG 600
            C  C R +  +C  C  NS    YCS++CQ +HW+YH+  C     G+   A   + +RG+ GL NLGNTCF+NSA+QCLSH   LT H ++N ++ D+N  N LG
Sbjct:  123 CVVCSRMSINRCGNCKLNS----YCSRTCQTSHWKYHRDTCRAIISGKKVTAMDLVGRRGQTGLRNLGNTCFMNSALQCLSHTPVLTNHFISNRYQDDLNTDNVLG 224
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BLAST of mRNA_H-paniculata_contig5671.13208.1 vs. uniprot
Match: A0A1V9YKT0_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKT0_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.550e-19
Identity = 47/106 (44.34%), Postives = 65/106 (61.32%), Query Frame = 0 
Query:  499 CAACGRHAKEKCARCHKNSHRVFYCSQSCQEAHWRYHKKLCGGRDPQAALAMA----KRGKAGLINLGNTCFLNSAVQCLSHVQPLTQHILTNAFRGDINDSNPLG 600
            C  C R ++ +C  C  NS    YCS+ CQ AHW++HK +C       + +M     +RG+ GL NLGNTCF+N+A+QCLSH   LT H L+N ++ D+N  N LG
Sbjct:  230 CVVCARPSRSRCGLCKTNS----YCSKGCQSAHWKFHKTVCKTLQNNGSASMVEIHGRRGQTGLRNLGNTCFMNAALQCLSHTPVLTTHFLSNKYQEDLNKDNVLG 331
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5671.13208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L229_9PHAE6.510e-7654.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSH2_ECTSI2.110e-7256.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2STD1_9STRA1.860e-2247.17Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
T0RKH9_SAPDV6.830e-2248.11Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Sapr... [more]
A0A7S2A1U5_9STRA8.890e-2144.72Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Dity... [more]
M4BGP8_HYAAE2.620e-2046.02Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Hyal... [more]
A0A7S2S126_9STRA3.980e-2042.62Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A067C7Q0_SAPPC4.950e-2045.05Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Sapr... [more]
A0A1V9ZPK2_9STRA2.200e-1944.34Ubiquitin carboxyl-terminal hydrolase (Fragment) n... [more]
A0A1V9YKT0_9STRA2.550e-1944.34Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Achl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006615Peptidase C19, ubiquitin-specific peptidase, DUSP domainSMARTSM00695duspcoord: 1..332
e-value: 1.0E-5
score: 35.0
IPR006615Peptidase C19, ubiquitin-specific peptidase, DUSP domainPFAMPF06337DUSPcoord: 243..329
e-value: 1.9E-11
score: 44.4
IPR006615Peptidase C19, ubiquitin-specific peptidase, DUSP domainPROSITEPS51283DUSPcoord: 1..329
score: 11.925
NoneNo IPR availableGENE3D3.30.2230.10coord: 245..339
e-value: 1.4E-13
score: 52.3
NoneNo IPR availableGENE3D3.90.70.10coord: 549..600
e-value: 2.1E-13
score: 52.0
NoneNo IPR availableGENE3D3.30.60.180coord: 487..543
e-value: 1.4E-11
score: 45.9
NoneNo IPR availablePANTHERPTHR21646:SF24FI20021P1coord: 363..600
NoneNo IPR availablePANTHERPTHR21646FAMILY NOT NAMEDcoord: 363..600
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 497..540
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 499..539
e-value: 3.1E-8
score: 33.6
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 499..539
score: 10.661
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 557..586
e-value: 1.1E-8
score: 34.9
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 557..572
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 556..600
score: 11.621
IPR035927DUSP-like superfamilySUPERFAMILY143791DUSP-likecoord: 263..328
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 552..597

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5671contigH-paniculata_contig5671:4741..13236 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5671.13208.1mRNA_H-paniculata_contig5671.13208.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5671 4741..13236 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5671.13208.1 ID=prot_H-paniculata_contig5671.13208.1|Name=mRNA_H-paniculata_contig5671.13208.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=600bp
KWWLRWQRYTGCDKDAVASAASVSAAAASADGGVAVRSNNYSDCDSGDDG
EHSGANAAKEGEGEVTASHGERYNRDDRSGGGNRGVDGGGGEGDIKPGAS
ADASGDRVFVEVDEEVAPRFAVAPEAMAREHAETVGAAEAAMTAAVGDDD
DAAPPPAGGGDASSPPSASADGNPTMVPADKEGVSSPVVTVPEDSSGKGG
GHDGNGDDGNGNHAARTEVSRVGADDGVNVREAAEEEDNEEIKGETEEAP
VIPDATAALPITDRYPHPGPIDNSALVLEAGAPGTILGVGRRLRMRLVRG
YHFVLVPQEAWSALHAWYGGGPVLPRQLVPVKDSTSGHVVYEPQLYPEFS
LLDPVLRANSMPLPAASSASSCSTRQNQNRNHPASSSRPDFKDSSCDAAT
MADGGDDEMPVVGPPPPPPPAPLVSSSSSSLPNGYHPGTNGHNDGGATAA
APKDDGDGGHAAVGHDPVSAGGGGRGERKEHVVVLRREGERRAASGGLCA
ACGRHAKEKCARCHKNSHRVFYCSQSCQEAHWRYHKKLCGGRDPQAALAM
AKRGKAGLINLGNTCFLNSAVQCLSHVQPLTQHILTNAFRGDINDSNPLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006615Pept_C19_DUSP
IPR002893Znf_MYND
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR035927DUSP-like_sf
IPR038765Papain-like_cys_pep_sf