prot_H-paniculata_contig566.13193.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig566.13193.1
Unique Nameprot_H-paniculata_contig566.13193.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length297
Homology
BLAST of mRNA_H-paniculata_contig566.13193.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 7.280e-57
Identity = 120/303 (39.60%), Postives = 173/303 (57.10%), Query Frame = 0
Query:    1 MFRKIVDGEVEMVVVVHVDDTLTHAKDH-----------LIELKDLGNADFYMGCHVSRNRKACELKLDQYMYVQSMTEKFGLEKTSSIPAMSGAPALSIGCEPKTPEEKEEMTKFSCREAVEALMWTATMTRPDIACAVRAVARFCENSGLAHKKAVIEIVQYVLRTMEWGITYG-GQGCGLSMEAYTDSDFGACLDTRRSVSGGVVMMAKGAISWHSRMPEKAA-GTSEAEYIALSQSVKGVMFLRQVQELMEPSIITGVVDVFEDHEGATKLTNNKHSSRRTKHIDVEHHMVRNASDARK 290
            +FR I +G V + +VVHVDD  +  ++            ++ +K+LG+  +Y GC   R+  A  LK+ Q  Y + +  +FG+E    IP       L +G +    ++ EE+  +  RE + +LMW AT TRPDIA AVRAVAR+C +    H +A + I+ YV+RT + GIT+  G   GLSME + D+D+ +    RRSVSGG+VM   G ISW SR  +     T+EAEY++L+  +K V+FLRQV   M P      + VFED++GA +L  N  S+   KHIDV HH +R     RK
Sbjct:    6 VFRLIEEGRVVVTLVVHVDDIFSIGEEERYDQFGRDLNTMVRVKNLGDLIWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIP-------LPVGMKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNLKHIDVRHHFIRELVVGRK 301          
BLAST of mRNA_H-paniculata_contig566.13193.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 1.100e-56
Identity = 119/309 (38.51%), Postives = 178/309 (57.61%), Query Frame = 0
Query:    1 MFRKIVDGEVEMVVVVHVDDTLTHAKDH-----------LIELKDLGNADFYMGCHVSRNRKACELKLDQYMYVQSMTEKFGLEKTSSIPAMSGAPALSIGCEPKTPEEKEEMTKFSCREAVEALMWTATMTRPDIACAVRAVARFCENSGLAHKKAVIEIVQYVLRTMEWGITYG-GQGCGLSMEAYTDSDFGACLDTRRSVSGGVVMMAKGAISWHSRMPEKAA-GTSEAEYIALSQSVKGVMFLRQVQELMEPSIITGVVDVFEDHEGATKLTNNKHSSRRTKHIDVEHHMVRNASDARKVRVGYV 296
            +FR I +G V + +VVHVDD  +  ++            ++ +K+LG+  +Y GC   R+  A  LK+ Q  Y + +  +FG+E    IP       L +G +    ++ EE+  +  RE + +LMW AT TRPDIA AVRAVAR+C +    H +A + I+ YV+RT + GIT+  G   GLSME + D+D+ +    RRSVSGG+VM   G ISW SR  +     T+EAEY++L+  +K V+FLRQV   M P      + VFED++GA +L  N  S+  +KHIDV HH +R     +++ + +V
Sbjct:  107 VFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIP-------LPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHV 408          
BLAST of mRNA_H-paniculata_contig566.13193.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 3.510e-55
Identity = 119/309 (38.51%), Postives = 178/309 (57.61%), Query Frame = 0
Query:    1 MFRKIVDGEVEMVVVVHVDDTLTHAKDH-----------LIELKDLGNADFYMGCHVSRNRKACELKLDQYMYVQSMTEKFGLEKTSSIPAMSGAPALSIGCEPKTPEEKEEMTKFSCREAVEALMWTATMTRPDIACAVRAVARFCENSGLAHKKAVIEIVQYVLRTMEWGITYG-GQGCGLSMEAYTDSDFGACLDTRRSVSGGVVMMAKGAISWHSRMPEKAA-GTSEAEYIALSQSVKGVMFLRQVQELMEPSIITGVVDVFEDHEGATKLTNNKHSSRRTKHIDVEHHMVRNASDARKVRVGYV 296
            +FR I +G V + +VVHVDD  +  ++            ++ +K+LG+  +Y GC   R+  A  LK+ Q  Y + +  +FG+E    IP       L +G +    ++ EE+  +  RE + +LMW AT TRPDIA AVRAVAR+C +    H +A + I+ YV+RT + GIT+  G   GLSME + D+D+ +    RRSVSGG+VM   G ISW SR  +     T+EAEY++L+  +K V+FLRQV   M P      + VFED++GA +L  N  S+  +KHIDV HH +R     +++ + +V
Sbjct:  281 VFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIP-------LPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHV 582          
BLAST of mRNA_H-paniculata_contig566.13193.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 4.060e-55
Identity = 116/309 (37.54%), Postives = 171/309 (55.34%), Query Frame = 0
Query:    1 MFRKIVDGEVEMVVVVHVDDTLTHAK-----------DHLIELKDLGNADFYMGCHVSRNRKACELKLDQYMYVQSMTEKFGLEKTSSIPAMSGAPALSIGCEPKTPEEKEEMTKFSCREAVEALMWTATMTRPDIACAVRAVARFCENSGLAHKKAVIEIVQYVLRTMEWGITYG-GQGCGLSMEAYTDSDFGACLDTRRSVSGGVVMMAKGAISWHSRMPEKAA-GTSEAEYIALSQSVKGVMFLRQVQELMEPSIITGVVDVFEDHEGATKLTNNKHSSRRTKHIDVEHHMVRNASDARKVRVGYV 296
            +FR I DG V +++VVHVDD     +           +  + +K+LG   +Y GC   RN++   L + Q  +   +  ++G+    S+P  SG        +       E  T+F  RE V +LMW AT TRPDIA AVRAVAR+C +  L H  A ++I+ Y  RT  +GI++  G   G S++ Y D+DF +    RRSVSGG+V    GA+SW SR  +     T+EAEY+AL   VK ++FLRQ+   M P +    + VFED++GA +L  N  S+  +KHIDV HH +R   + +++ V +V
Sbjct:  131 VFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDAD-------EVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHV 432          
BLAST of mRNA_H-paniculata_contig566.13193.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 1.570e-53
Identity = 119/309 (38.51%), Postives = 178/309 (57.61%), Query Frame = 0
Query:    1 MFRKIVDGEVEMVVVVHVDDTLTHAKDH-----------LIELKDLGNADFYMGCHVSRNRKACELKLDQYMYVQSMTEKFGLEKTSSIPAMSGAPALSIGCEPKTPEEKEEMTKFSCREAVEALMWTATMTRPDIACAVRAVARFCENSGLAHKKAVIEIVQYVLRTMEWGITYG-GQGCGLSMEAYTDSDFGACLDTRRSVSGGVVMMAKGAISWHSRMPEKAA-GTSEAEYIALSQSVKGVMFLRQVQELMEPSIITGVVDVFEDHEGATKLTNNKHSSRRTKHIDVEHHMVRNASDARKVRVGYV 296
            +FR I +G V + +VVHVDD  +  ++            ++ +K+LG+  +Y GC   R+  A  LK+ Q  Y + +  +FG+E    IP       L +G +    ++ EE+  +  RE + +LMW AT TRPDIA AVRAVAR+C +    H +A + I+ YV+RT + GIT+  G   GLSME + D+D+ +    RRSVSGG+VM   G ISW SR  +     T+EAEY++L+  +K V+FLRQV   M P      + VFED++GA +L  N  S+  +KHIDV HH +R     +++ + +V
Sbjct:  802 VFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIP-------LPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHV 1103          
BLAST of mRNA_H-paniculata_contig566.13193.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 9.690e-53
Identity = 109/309 (35.28%), Postives = 174/309 (56.31%), Query Frame = 0
Query:    1 MFRKIVDGEVEMVVVVHVDDTLTHAK-----------DHLIELKDLGNADFYMGCHVSRNRKACELKLDQYMYVQSMTEKFGLEKTSSIPAMSGAPALSIGCEPKTPEEKEEMTKFSCREAVEALMWTATMTRPDIACAVRAVARFCENSGLAHKKAVIEIVQYVLRTMEWGITYG-GQGCGLSMEAYTDSDFGACLDTRRSVSGGVVMMAKGAISWHSRMPEKAA-GTSEAEYIALSQSVKGVMFLRQVQELMEPSIITGVVDVFEDHEGATKLTNNKHSSRRTKHIDVEHHMVRNASDARKVRVGYV 296
            +FR + +G V M++VVHVDD     +           + ++ +K+LG   +Y  C   R+ +   L++ Q  + + +  ++G+E   S+P       L +  +    +E E       RE V +LMW AT TRPDIA AVRAVAR+C +  + H KA + I+ YV RT   GIT+  G   G+SM+ + D+D+ +    RRSVSGG+VM   G ++W SR  +     T+EAEY+A++  +K V+FLRQV   M P      + VFED++GA ++ +N  ++  +KHIDV HH +R   + +++ + +V
Sbjct:   45 VFRLMEEGRVIMIIVVHVDDIFAVGQKERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVP-------LPVSVKLTDFDENEASADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHV 346          
BLAST of mRNA_H-paniculata_contig566.13193.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 2.880e-52
Identity = 116/309 (37.54%), Postives = 171/309 (55.34%), Query Frame = 0
Query:    1 MFRKIVDGEVEMVVVVHVDDTLTHAK-----------DHLIELKDLGNADFYMGCHVSRNRKACELKLDQYMYVQSMTEKFGLEKTSSIPAMSGAPALSIGCEPKTPEEKEEMTKFSCREAVEALMWTATMTRPDIACAVRAVARFCENSGLAHKKAVIEIVQYVLRTMEWGITYG-GQGCGLSMEAYTDSDFGACLDTRRSVSGGVVMMAKGAISWHSRMPEKAA-GTSEAEYIALSQSVKGVMFLRQVQELMEPSIITGVVDVFEDHEGATKLTNNKHSSRRTKHIDVEHHMVRNASDARKVRVGYV 296
            +FR I DG V +++VVHVDD     +           +  + +K+LG   +Y GC   RN++   L + Q  +   +  ++G+    S+P  SG        +       E  T+F  RE V +LMW AT TRPDIA AVRAVAR+C +  L H  A ++I+ Y  RT  +GI++  G   G S++ Y D+DF +    RRSVSGG+V    GA+SW SR  +     T+EAEY+AL   VK ++FLRQ+   M P +    + VFED++GA +L  N  S+  +KHIDV HH +R   + +++ V +V
Sbjct: 1467 VFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDAD-------EVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHV 1768          
BLAST of mRNA_H-paniculata_contig566.13193.1 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 2.880e-52
Identity = 116/309 (37.54%), Postives = 171/309 (55.34%), Query Frame = 0
Query:    1 MFRKIVDGEVEMVVVVHVDDTLTHAK-----------DHLIELKDLGNADFYMGCHVSRNRKACELKLDQYMYVQSMTEKFGLEKTSSIPAMSGAPALSIGCEPKTPEEKEEMTKFSCREAVEALMWTATMTRPDIACAVRAVARFCENSGLAHKKAVIEIVQYVLRTMEWGITYG-GQGCGLSMEAYTDSDFGACLDTRRSVSGGVVMMAKGAISWHSRMPEKAA-GTSEAEYIALSQSVKGVMFLRQVQELMEPSIITGVVDVFEDHEGATKLTNNKHSSRRTKHIDVEHHMVRNASDARKVRVGYV 296
            +FR I DG V +++VVHVDD     +           +  + +K+LG   +Y GC   RN++   L + Q  +   +  ++G+    S+P  SG        +       E  T+F  RE V +LMW AT TRPDIA AVRAVAR+C +  L H  A ++I+ Y  RT  +GI++  G   G S++ Y D+DF +    RRSVSGG+V    GA+SW SR  +     T+EAEY+AL   VK ++FLRQ+   M P +    + VFED++GA +L  N  S+  +KHIDV HH +R   + +++ V +V
Sbjct: 1253 VFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDAD-------EVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHV 1554          
BLAST of mRNA_H-paniculata_contig566.13193.1 vs. uniprot
Match: A0A6H5KBD4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 3.020e-52
Identity = 116/309 (37.54%), Postives = 171/309 (55.34%), Query Frame = 0
Query:    1 MFRKIVDGEVEMVVVVHVDDTLTHAK-----------DHLIELKDLGNADFYMGCHVSRNRKACELKLDQYMYVQSMTEKFGLEKTSSIPAMSGAPALSIGCEPKTPEEKEEMTKFSCREAVEALMWTATMTRPDIACAVRAVARFCENSGLAHKKAVIEIVQYVLRTMEWGITYG-GQGCGLSMEAYTDSDFGACLDTRRSVSGGVVMMAKGAISWHSRMPEKAA-GTSEAEYIALSQSVKGVMFLRQVQELMEPSIITGVVDVFEDHEGATKLTNNKHSSRRTKHIDVEHHMVRNASDARKVRVGYV 296
            +FR I DG V +++VVHVDD     +           +  + +K+LG   +Y GC   RN++   L + Q  +   +  ++G+    S+P  SG        +       E  T+F  RE V +LMW AT TRPDIA AVRAVAR+C +  L H  A ++I+ Y  RT  +GI++  G   G S++ Y D+DF +    RRSVSGG+V    GA+SW SR  +     T+EAEY+AL   VK ++FLRQ+   M P +    + VFED++GA +L  N  S+  +KHIDV HH +R   + +++ V +V
Sbjct: 1321 VFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDAD-------EVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHV 1622          
BLAST of mRNA_H-paniculata_contig566.13193.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 5.870e-52
Identity = 109/309 (35.28%), Postives = 174/309 (56.31%), Query Frame = 0
Query:    1 MFRKIVDGEVEMVVVVHVDDTLTHAK-----------DHLIELKDLGNADFYMGCHVSRNRKACELKLDQYMYVQSMTEKFGLEKTSSIPAMSGAPALSIGCEPKTPEEKEEMTKFSCREAVEALMWTATMTRPDIACAVRAVARFCENSGLAHKKAVIEIVQYVLRTMEWGITYG-GQGCGLSMEAYTDSDFGACLDTRRSVSGGVVMMAKGAISWHSRMPEKAA-GTSEAEYIALSQSVKGVMFLRQVQELMEPSIITGVVDVFEDHEGATKLTNNKHSSRRTKHIDVEHHMVRNASDARKVRVGYV 296
            +FR + +G V M++VVHVDD     +           + ++ +K+LG   +Y  C   R+ +   L++ Q  + + +  ++G+E   S+P       L +  +    +E E       RE V +LMW AT TRPDIA AVRAVAR+C +  + H KA + I+ YV RT   GIT+  G   G+SM+ + D+D+ +    RRSVSGG+VM   G ++W SR  +     T+EAEY+A++  +K V+FLRQV   M P      + VFED++GA ++ +N  ++  +KHIDV HH +R   + +++ + +V
Sbjct:  107 VFRLMEEGRVIMIIVVHVDDIFAVGQKERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVP-------LPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHV 408          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig566.13193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KR24_9PHAE7.280e-5739.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLN0_9PHAE1.100e-5638.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE3.510e-5538.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JFG2_9PHAE4.060e-5537.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K2R1_9PHAE1.570e-5338.51Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5L4G9_9PHAE9.690e-5335.28Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J4N2_9PHAE2.880e-5237.54Integrase catalytic domain-containing protein n=18... [more]
A0A6H5L867_9PHAE2.880e-5237.54Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBD4_9PHAE3.020e-5237.54Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JEF2_9PHAE5.870e-5235.28Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 107..284
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 107..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig566contigH-paniculata_contig566:34144..35034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig566.13193.1mRNA_H-paniculata_contig566.13193.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig566 34144..35034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig566.13193.1 ID=prot_H-paniculata_contig566.13193.1|Name=mRNA_H-paniculata_contig566.13193.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=297bp
MFRKIVDGEVEMVVVVHVDDTLTHAKDHLIELKDLGNADFYMGCHVSRNR
KACELKLDQYMYVQSMTEKFGLEKTSSIPAMSGAPALSIGCEPKTPEEKE
EMTKFSCREAVEALMWTATMTRPDIACAVRAVARFCENSGLAHKKAVIEI
VQYVLRTMEWGITYGGQGCGLSMEAYTDSDFGACLDTRRSVSGGVVMMAK
GAISWHSRMPEKAAGTSEAEYIALSQSVKGVMFLRQVQELMEPSIITGVV
DVFEDHEGATKLTNNKHSSRRTKHIDVEHHMVRNASDARKVRVGYV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like