prot_H-paniculata_contig56578.13186.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig56578.13186.1
Unique Nameprot_H-paniculata_contig56578.13186.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length95
Homology
[Close]
BLAST of mRNA_H-paniculata_contig56578.13186.1 vs. uniprot
Match: A0A8F0JX13_9PHAE (Ribosomal protein S19 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JX13_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 2.010e-59
Identity = 90/94 (95.74%), Postives = 93/94 (98.94%), Query Frame = 0 
Query:    1 MARSFRKGPFIAYHLLEKIEKMNKTGKKNLIKTWSRSSTIVPSMIGHTIAVYNGKQHFPLYISDQIIGHKLGEFIPTRNFRSHIKSSDRRAKKK 94
            MARSFRKGPFIAYHLLEKIE+MNKTGKKNLIKTWSRSSTI+PSMIGHTIAVYNGKQH PLYISDQIIGHKLGEF+PTRNFRSHIKSSDRRAKKK
Sbjct:    1 MARSFRKGPFIAYHLLEKIEQMNKTGKKNLIKTWSRSSTIIPSMIGHTIAVYNGKQHVPLYISDQIIGHKLGEFVPTRNFRSHIKSSDRRAKKK 94
[Close]
BLAST of mRNA_H-paniculata_contig56578.13186.1 vs. uniprot
Match: D1GJS8_FUCVE (30S ribosomal protein S19, chloroplastic n=16 Tax=Fucales TaxID=3009 RepID=D1GJS8_FUCVE)

HSP 1 Score: 172 bits (435), Expect = 4.390e-54
Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 0 
Query:    1 MARSFRKGPFIAYHLLEKIEKMNKTGKKNLIKTWSRSSTIVPSMIGHTIAVYNGKQHFPLYISDQIIGHKLGEFIPTRNFRSHIKSSDRRAKKK 94
            MARSFRKGPFIAYHLL+KIEKMNKT KKN+IKTWSRSS I+PSMIGHTIAVYNGKQH PL+IS+QIIGHKLGEF PTRNFRSHIKSSDRR K+K
Sbjct:    1 MARSFRKGPFIAYHLLQKIEKMNKTEKKNIIKTWSRSSMIIPSMIGHTIAVYNGKQHVPLFISEQIIGHKLGEFTPTRNFRSHIKSSDRRLKRK 94
[Close]
BLAST of mRNA_H-paniculata_contig56578.13186.1 vs. uniprot
Match: A0A7T8G4D6_SCYLO (30S ribosomal protein S19, chloroplastic n=35 Tax=Phaeophyceae TaxID=2870 RepID=A0A7T8G4D6_SCYLO)

HSP 1 Score: 169 bits (427), Expect = 1.130e-52
Identity = 81/94 (86.17%), Postives = 88/94 (93.62%), Query Frame = 0 
Query:    1 MARSFRKGPFIAYHLLEKIEKMNKTGKKNLIKTWSRSSTIVPSMIGHTIAVYNGKQHFPLYISDQIIGHKLGEFIPTRNFRSHIKSSDRRAKKK 94
            M RSFRKGPFIAYHLL+KIE+MN+TGKK  IKTWSRSS I+PSMIGHTI+VYNGK+H PL+ISDQIIGHKLGEFIPTRNFRSHIKSSDRR KKK
Sbjct:   15 MTRSFRKGPFIAYHLLQKIEEMNETGKKKSIKTWSRSSMIIPSMIGHTISVYNGKKHIPLFISDQIIGHKLGEFIPTRNFRSHIKSSDRRLKKK 108
[Close]
BLAST of mRNA_H-paniculata_contig56578.13186.1 vs. uniprot
Match: A0A2I4Q2Y8_9PHAE (30S ribosomal protein S19, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2Y8_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 7.470e-51
Identity = 75/93 (80.65%), Postives = 89/93 (95.70%), Query Frame = 0 
Query:    1 MARSFRKGPFIAYHLLEKIEKMNKTGKKNLIKTWSRSSTIVPSMIGHTIAVYNGKQHFPLYISDQIIGHKLGEFIPTRNFRSHIKSSDRRAKK 93
            MARS+RKGPF+AYHLL+KI+++NKT KK ++KTWSRSSTI+P+MIGHTIA+YNGK+HFPL+IS+QIIGHKLGEFIPT NFRSHIKSSDRR KK
Sbjct:    1 MARSYRKGPFVAYHLLQKIDELNKTKKKVVVKTWSRSSTIIPAMIGHTIAIYNGKKHFPLFISEQIIGHKLGEFIPTHNFRSHIKSSDRRLKK 93
[Close]
BLAST of mRNA_H-paniculata_contig56578.13186.1 vs. uniprot
Match: A0A7S6U9Y0_9STRA (30S ribosomal protein S19, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9Y0_9STRA)

HSP 1 Score: 154 bits (388), Expect = 6.110e-47
Identity = 71/93 (76.34%), Postives = 84/93 (90.32%), Query Frame = 0 
Query:    1 MARSFRKGPFIAYHLLEKIEKMNKTGKKNLIKTWSRSSTIVPSMIGHTIAVYNGKQHFPLYISDQIIGHKLGEFIPTRNFRSHIKSSDRRAKK 93
            M RS +KGPF+AYHLL+KIE+MN TG+K  IKTWSRSSTI+P MIGHTIAVYNGK+H PL++SDQIIGHKLGEFIPTRNF+SH+KS DR+ K+
Sbjct:    1 MGRSLKKGPFVAYHLLQKIEEMNTTGRKETIKTWSRSSTIIPDMIGHTIAVYNGKRHIPLFVSDQIIGHKLGEFIPTRNFKSHVKS-DRKTKR 92
[Close]
BLAST of mRNA_H-paniculata_contig56578.13186.1 vs. uniprot
Match: A0A516ZAJ1_9STRA (30S ribosomal protein S19, chloroplastic n=1 Tax=Pseudopedinella elastica TaxID=35684 RepID=A0A516ZAJ1_9STRA)

HSP 1 Score: 152 bits (383), Expect = 3.540e-46
Identity = 70/93 (75.27%), Postives = 86/93 (92.47%), Query Frame = 0 
Query:    1 MARSFRKGPFIAYHLLEKIEKMNKTGKKNLIKTWSRSSTIVPSMIGHTIAVYNGKQHFPLYISDQIIGHKLGEFIPTRNFRSHIKSSDRRAKK 93
            M RS RKGPF+AYHLL+KI +MN+TGKK++IKTWSR+STI+PSM+GHTIAVYNGKQH P++ISDQI+GHKLGEF PTR FRSHIKS D++A++
Sbjct:    1 MGRSLRKGPFVAYHLLKKINEMNETGKKSVIKTWSRASTILPSMVGHTIAVYNGKQHVPIFISDQIVGHKLGEFAPTRTFRSHIKS-DKKARR 92
[Close]
BLAST of mRNA_H-paniculata_contig56578.13186.1 vs. uniprot
Match: A0A8E6D5Y0_9PHAE (30S ribosomal protein S19, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D5Y0_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 1.460e-44
Identity = 74/99 (74.75%), Postives = 85/99 (85.86%), Query Frame = 0 
Query:    1 MARSFRKGPFIAYHLLEKIEKMN---KTGKKNL--IKTWSRSSTIVPSMIGHTIAVYNGKQHFPLYISDQIIGHKLGEFIPTRNFRSHIKSSDRRAKKK 94
            M RS RKGPF+AYHLL+KIEK N   + GKKN   I+TWSRSS I+PSMIGHTIAVYNG++H PL+ISDQIIG+KLGEF+PTRNF SH+KSSDRR KKK
Sbjct:    1 MTRSDRKGPFVAYHLLQKIEKANNEGQKGKKNATTIRTWSRSSMIIPSMIGHTIAVYNGRKHIPLFISDQIIGYKLGEFVPTRNFTSHVKSSDRRTKKK 99
[Close]
BLAST of mRNA_H-paniculata_contig56578.13186.1 vs. uniprot
Match: B2XTF1_HETAK (30S ribosomal protein S19, chloroplastic n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTF1_HETAK)

HSP 1 Score: 147 bits (372), Expect = 1.680e-44
Identity = 66/93 (70.97%), Postives = 85/93 (91.40%), Query Frame = 0 
Query:    1 MARSFRKGPFIAYHLLEKIEKMNKTGKKNLIKTWSRSSTIVPSMIGHTIAVYNGKQHFPLYISDQIIGHKLGEFIPTRNFRSHIKSSDRRAKK 93
            M+RS +KGPF+AYHLL+K++KMN+ GKK +I TWSRSSTI+P M+GHTIAVYNGKQH P++I++Q+IGHKLGEF+PTR FRSHIKS DR++K+
Sbjct:    1 MSRSLKKGPFVAYHLLKKVQKMNELGKKEIITTWSRSSTIIPPMLGHTIAVYNGKQHVPVFINEQVIGHKLGEFVPTRTFRSHIKS-DRKSKR 92
[Close]
BLAST of mRNA_H-paniculata_contig56578.13186.1 vs. uniprot
Match: A0A514CPM4_9STRA (30S ribosomal protein S19, chloroplastic n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A514CPM4_9STRA)

HSP 1 Score: 146 bits (369), Expect = 4.830e-44
Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 0 
Query:    1 MARSFRKGPFIAYHLLEKIEKMNKTGKKNLIKTWSRSSTIVPSMIGHTIAVYNGKQHFPLYISDQIIGHKLGEFIPTRNFRSHIKSSDR 89
            M RS RKGPF+AYHLL+KIE MN+  +K +IKTWSRSSTI PSM+GHTIAVYNG+QH P++ISDQI+GHKLGEF PTR FRSHIKS  R
Sbjct:    1 MGRSIRKGPFVAYHLLKKIEVMNEASQKQVIKTWSRSSTITPSMVGHTIAVYNGRQHVPIFISDQIVGHKLGEFAPTRTFRSHIKSDKR 89
[Close]
BLAST of mRNA_H-paniculata_contig56578.13186.1 vs. uniprot
Match: A0A516ZA23_9STRA (30S ribosomal protein S19, chloroplastic n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A516ZA23_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.380e-43
Identity = 66/93 (70.97%), Postives = 83/93 (89.25%), Query Frame = 0 
Query:    1 MARSFRKGPFIAYHLLEKIEKMNKTGKKNLIKTWSRSSTIVPSMIGHTIAVYNGKQHFPLYISDQIIGHKLGEFIPTRNFRSHIKSSDRRAKK 93
            M RS RKGPF+AYHLL+K+ +MNKT KK +I+TWSR+STI+PSM+GHTIAVYNGKQH P++IS+ I+GHKLGEF PTR FRSH+KS D++AK+
Sbjct:    1 MGRSLRKGPFVAYHLLKKVNEMNKTDKKLVIQTWSRASTIIPSMVGHTIAVYNGKQHIPIFISETIVGHKLGEFAPTRTFRSHVKS-DKKAKR 92
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig56578.13186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0JX13_9PHAE2.010e-5995.74Ribosomal protein S19 n=1 Tax=Protohalopteris sp. ... [more]
D1GJS8_FUCVE4.390e-5488.3030S ribosomal protein S19, chloroplastic n=16 Tax=... [more]
A0A7T8G4D6_SCYLO1.130e-5286.1730S ribosomal protein S19, chloroplastic n=35 Tax=... [more]
A0A2I4Q2Y8_9PHAE7.470e-5180.6530S ribosomal protein S19, chloroplastic n=1 Tax=D... [more]
A0A7S6U9Y0_9STRA6.110e-4776.3430S ribosomal protein S19, chloroplastic n=1 Tax=S... [more]
A0A516ZAJ1_9STRA3.540e-4675.2730S ribosomal protein S19, chloroplastic n=1 Tax=P... [more]
A0A8E6D5Y0_9PHAE1.460e-4474.7530S ribosomal protein S19, chloroplastic n=1 Tax=I... [more]
B2XTF1_HETAK1.680e-4470.9730S ribosomal protein S19, chloroplastic n=2 Tax=H... [more]
A0A514CPM4_9STRA4.830e-4475.2830S ribosomal protein S19, chloroplastic n=1 Tax=D... [more]
A0A516ZA23_9STRA1.380e-4370.9730S ribosomal protein S19, chloroplastic n=1 Tax=F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002222Ribosomal protein S19/S15PRINTSPR00975RIBOSOMALS19coord: 53..65
score: 42.18
coord: 33..52
score: 60.65
coord: 65..80
score: 61.39
IPR002222Ribosomal protein S19/S15PIRSFPIRSF002144RPS19p_RPS19a_RPS15e_RPS19ocoord: 1..94
e-value: 1.5E-31
score: 106.4
IPR002222Ribosomal protein S19/S15PFAMPF00203Ribosomal_S19coord: 3..83
e-value: 7.3E-34
score: 115.5
IPR002222Ribosomal protein S19/S15PANTHERPTHR11880RIBOSOMAL PROTEIN S19P FAMILY MEMBERcoord: 1..90
IPR002222Ribosomal protein S19/S15HAMAPMF_00531Ribosomal_S19coord: 1..89
score: 24.433
IPR005732Ribosomal protein S19, bacterial-typeTIGRFAMTIGR01050TIGR01050coord: 1..92
e-value: 8.3E-42
score: 139.4
IPR023575Ribosomal protein S19, superfamilyGENE3D3.30.860.10coord: 1..94
e-value: 1.1E-38
score: 132.9
IPR023575Ribosomal protein S19, superfamilySUPERFAMILY54570Ribosomal protein S19coord: 3..83
NoneNo IPR availablePANTHERPTHR11880:SF837S RIBOSOMAL PROTEIN S19, MITOCHONDRIALcoord: 1..90
IPR020934Ribosomal protein S19 conserved sitePROSITEPS00323RIBOSOMAL_S19coord: 53..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig56578contigH-paniculata_contig56578:123..407 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig56578.13186.1mRNA_H-paniculata_contig56578.13186.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig56578 123..407 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig56578.13186.1 ID=prot_H-paniculata_contig56578.13186.1|Name=mRNA_H-paniculata_contig56578.13186.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp
MARSFRKGPFIAYHLLEKIEKMNKTGKKNLIKTWSRSSTIVPSMIGHTIA
VYNGKQHFPLYISDQIIGHKLGEFIPTRNFRSHIKSSDRRAKKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002222Ribosomal_S19
IPR005732Ribosomal_S19_bac-type
IPR023575Ribosomal_S19_SF
IPR020934Ribosomal_S19_CS