prot_H-paniculata_contig5635.13162.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5635.13162.1
Unique Nameprot_H-paniculata_contig5635.13162.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length90
Homology
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BLAST of mRNA_H-paniculata_contig5635.13162.1 vs. uniprot
Match: D7FXW6_ECTSI (ABC transporter ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW6_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 1.510e-18
Identity = 42/53 (79.25%), Postives = 43/53 (81.13%), Query Frame = 0 
Query:   31 ANWYLRAADGSRQGPYGLPQLGEWSDAGYVSPDSQVQWGPSGTPQPLSSALGA 83
            +NWYLRA DGS QGPYGL QLGEWS AGYVS DSQVQWG  G PQ LSS LGA
Sbjct:   38 SNWYLRAPDGSSQGPYGLSQLGEWSRAGYVSADSQVQWGAGGPPQALSSVLGA 90
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5635.13162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXW6_ECTSI1.510e-1879.25ABC transporter ATP-binding protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035445GYF-like domain superfamilyGENE3D3.30.1490.40coord: 31..81
e-value: 1.7E-6
score: 29.3
IPR035445GYF-like domain superfamilySUPERFAMILY55277GYF domaincoord: 30..80
IPR003169GYF domainPROSITEPS50829GYFcoord: 30..82
score: 9.875

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5635contigH-paniculata_contig5635:9221..12144 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5635.13162.1mRNA_H-paniculata_contig5635.13162.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5635 9041..12144 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5635.13162.1 ID=prot_H-paniculata_contig5635.13162.1|Name=mRNA_H-paniculata_contig5635.13162.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp
MKFHVSTVLAAVNIVGLSPNPIQANAGQGGANWYLRAADGSRQGPYGLPQ
LGEWSDAGYVSPDSQVQWGPSGTPQPLSSALGAEREGQSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035445GYF-like_dom_sf
IPR003169GYF