prot_H-paniculata_contig5614.13138.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5614.13138.1
Unique Nameprot_H-paniculata_contig5614.13138.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length497
Homology
BLAST of mRNA_H-paniculata_contig5614.13138.1 vs. uniprot
Match: A0A6H5JC72_9PHAE (GLOBIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC72_9PHAE)

HSP 1 Score: 538 bits (1386), Expect = 1.550e-173
Identity = 318/534 (59.55%), Postives = 379/534 (70.97%), Query Frame = 0
Query:    2 VNPYRQIKVHVLITKLEDNSGEHTEKNFELVADAILHHLGPSELPTTRALALDAAQTFVQRVLSSRSKDKKASKIRRRAFKGLLSNLIPLMLDCLKPGGGSNSNTLASSKKSS-----------STGDLGNGENGGVSAGTASRNLTGSMSEHGVDGVGGEVVVLHYY---HQYLLKVAVLETMHRFLMVLRALFKPPQSTNVQKAVAPLLDAEEDVLRDKAAAVLGQLSLCGKDNLKWVNIAIKVSLEAHNLLHDAWADEAAGQIPSKRLQTIMGDHPLLPPLQQTFEPGDAEAHVRAVGRRFPALCKLLATLISASPPKSHDADTAHGEP----------QQEQGASSKVVDQRPLLVSLTISLVQRVLRMGPQASSRCYNEVA-----DDGRGRGAAASP-------------GTLSPALAAGVTTQLLPPAVTLLEALVASSKLEDVMKDQQEAVCECMGQAVAQQMPVQGGVRAAVYRVMAFVIRYLQPQYAAAALGVPVLPLLFNEALLALGNRVSLHPLNTKRHAAP 493
            VNP+RQ+K+H L+ KLED++ E TE +F  + DAIL HL PSE PTTRALALD AQTFVQ V+S RSKDK++SKIRR+AFK LL+ LIPLMLDCLK   GS++++    + +S             GD G+ E GG++AG                G+GGEVVVLHYY   HQYLLKVAVLETM+RFL +LRALFKPPQST VQK VAPLLDA E+VLR+KAAAVLG+LSLCG+D L W NIAIKVSLE+HNLL DAW DE  GQIPS +++TIMG+HPLLPP+Q TF  GD EAHV ++GRRFPALCKLLATL++ASPPKS + +                ++  G+S     Q P LVSL+ISLVQRVLRMG QA ++   E A     D G  R  A++              GTLSP LAA V+  LLP AVTLLEALVASS+LE  M+D+Q  VC+CMGQAVAQ  PVQGGVR A YR MA ++RY++P+ AA  LGVP+LPLLFNEALLALGNRV+LH LNTK   AP
Sbjct:  834 VNPWRQMKLHELMAKLEDSTPEETEASFGNIGDAILLHLRPSEPPTTRALALDVAQTFVQNVVSERSKDKRSSKIRRKAFKELLARLIPLMLDCLKSPAGSSNSSFPREENASLGGGGGQERGEGFGDGGDAEEGGLAAGK---------------GLGGEVVVLHYYQQHHQYLLKVAVLETMNRFLTILRALFKPPQSTRVQKVVAPLLDASEEVLREKAAAVLGKLSLCGRDTLTWANIAIKVSLESHNLLQDAWPDEIVGQIPSAQVETIMGEHPLLPPIQDTFNKGDVEAHVLSIGRRFPALCKLLATLVTASPPKSQEPEEGXXXXXXXXXXXXXXKEIDGSSDSAPFQTPFLVSLSISLVQRVLRMGEQAWAKLEEERAGVKRDDPGPTRRRASAKTAQESTTHTNTAAGTLSPELAARVSGLLLPSAVTLLEALVASSRLEKAMEDRQGTVCQCMGQAVAQ-TPVQGGVRFAAYRSMAVIVRYIKPETAAEGLGVPILPLLFNEALLALGNRVNLHALNTKTVVAP 1351          
BLAST of mRNA_H-paniculata_contig5614.13138.1 vs. uniprot
Match: D7FHK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHK6_ECTSI)

HSP 1 Score: 483 bits (1243), Expect = 1.800e-161
Identity = 288/489 (58.90%), Postives = 349/489 (71.37%), Query Frame = 0
Query:    8 IKVHVLITKLEDNSGEHTEKNFELVADAILHHLGPSELPTTRALALDAAQTFVQRVLSSRSKDKKASKIRRRAFKGLLSNLIPLMLDCLKPGGGSNSNTLASSKKSSSTGDLGNGENGGVSAGTASRNLTGSMSEHGVD------GVGGEVVVLHYY---HQYLLKVAVLETMHRFLMVLRALFKPPQSTNVQKAVAPLLDAEEDVLRDKAAAVLGQLSLCGKDNLKWVNIAIKVSLEAHNLLHDAWADEAAGQIPSKRLQTIMGDHPLLPPLQQTFEPGDAEAHVRAVGRRFPALCKLLATLISASPPKSHDADTAHGEPQQEQGASSKVVDQRPLLVSLTISLVQRVLRMGPQASSRCYNEVADDGRGRGAAASPGTLSPALAAGVTTQLLPPAVTLLEALVASSKLEDVMKDQQEAVCECMGQAVAQQMPVQGGVRAAVYRVMAFVIRYLQPQYAAAALGVPVLPLLFNEALLALGNRVSLHPLNT 487
            +K+H L+ KLED++ E TE +F  + +AIL HL PSE PTTRALALD AQTFVQ VLS RSKDK++SKIRRRAFK LL++LIPLMLDCLK   GS+S++    + +S    LGN                               G+GGEV+VLHYY   HQYLLKVAVLETM+RFL VLRALF+PPQST VQK VAPLLDA E+VL++KAAAVLG+LSLCG+D LKW NIAIKVSLE+HNLL DAW DE  GQ+PS +++TIMG+HPLLPP+Q TF  GD EA+V ++GRRFPALCKLLATL++ASPPKS + +      +Q   A +K+ ++R  +     S  +R      +AS+    E A        + + GTLSP LAA V+  LLP AVTLLEALVASS+LE  M+D+Q  VC+CMGQAVAQ  PVQGGVR A YR MA +IRY++P  AA  LGVP+LPLLFNEALLALGNRV+LH LNT
Sbjct:    1 MKLHELMAKLEDSTAEETEASFGNIGEAILFHLKPSEPPTTRALALDVAQTFVQNVLSERSKDKRSSKIRRRAFKELLAHLIPLMLDCLKSPEGSSSSSSPRDENAS----LGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKGLGGEVIVLHYYQQHHQYLLKVAVLETMNRFLTVLRALFRPPQSTRVQKVVAPLLDASEEVLKEKAAAVLGKLSLCGRDTLKWANIAIKVSLESHNLLQDAWPDEIVGQVPSAQVETIMGEHPLLPPIQDTFNKGDVEAYVLSIGRRFPALCKLLATLVTASPPKSQEPERVLRMGEQ---AWAKLEEERAGVKRDDPSPTRR------RASATTAQESATS---TNTSTADGTLSPELAARVSGLLLPSAVTLLEALVASSRLEKAMEDRQGTVCQCMGQAVAQ-TPVQGGVRFAAYRAMAVIIRYIRPDTAAEGLGVPILPLLFNEALLALGNRVNLHALNT 472          
BLAST of mRNA_H-paniculata_contig5614.13138.1 vs. uniprot
Match: A0A6H5JJU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU2_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 3.730e-10
Identity = 90/310 (29.03%), Postives = 133/310 (42.90%), Query Frame = 0
Query:  185 PQSTNVQKAVAPLLDAEEDVLRDKAAAVLGQLSLCGKDNLKWVNIAIKVSLEAHNLLHDAWADE------AAGQIPSKRLQTIMGDHPLLPPLQ----QTFEPGDAEAHVRAVGRRFPALCKLLATLISASPPKSHDADTAHGEPQQEQGASSKVVDQRPLLVSLTISLVQRVLRM--------GPQASSRCYNEVADDGRGRGAAASPGTLSPALAAGVTTQLLPPAVTLLEALVASSKLEDVMKDQQEAVCECMGQAVAQQMPVQGGVRAAVYRVMAFVIRYLQPQYAAAALGVPVLPLLFNEALLAL 476
            P    V+ A AP L    DV+RD+AAAVL  L LCG+    W   A +V+LEAH LLH AW D       +    PS+    +     LLPPL     + F  G  +     V RRF  LC +L  +++           ++G P               + V L ++LV+RV RM        GPQ     +  VA      GA +    + P+L    +         LL AL A+++   V+++ +   C  + Q + +     G +RAA YR ++  +  L  + AA  L  P LP +  E   A+
Sbjct:  281 PHVKKVEAATAPWLQGPSDVIRDRAAAVLASLPLCGEAEA-WTQAAGRVTLEAHGLLHAAWPDNDVDMGTSDSMSPSQLDAALSSGAGLLPPLGGRAGEGFS-GPQQVLASLVSRRFKGLCHVLELMLTGD---------SNGRPVA-------------VPVGLILALVERVQRMVSSVVKGQGPQV----FIPVAQGALSHGALS---VIRPSLGLAASR--------LLHAL-ATTEASTVLRNARR-FCRALVQGMGKPSDA-GSLRAAGYRAVSRAVLQLG-EGAAPYLATPALPAILAEVRAAV 547          
BLAST of mRNA_H-paniculata_contig5614.13138.1 vs. uniprot
Match: D8LP19_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP19_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 2.900e-7
Identity = 39/93 (41.94%), Postives = 50/93 (53.76%), Query Frame = 0
Query:  185 PQSTNVQKAVAPLLDAEEDVLRDKAAAVLGQLSLCGKDNLKWVNIAIKVSLEAHNLLHDAWADE-----AAGQIPSKRLQTIMGDHP-LLPPL 271
            P    V+ A AP L    DV+RD+AAAVL  L LCG+    W   A +V+LEAH LLH AW D       +  + + +L   +G    LLPPL
Sbjct:  202 PHVKKVEAATAPWLQGPSDVIRDRAAAVLASLPLCGEAEA-WTQAAGRVALEAHGLLHAAWPDNDVDMGTSDSMSASQLDAALGSGAGLLPPL 293          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5614.13138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JC72_9PHAE1.550e-17359.55GLOBIN domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FHK6_ECTSI1.800e-16158.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJU2_9PHAE3.730e-1029.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP19_ECTSI2.900e-741.94Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 15..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5614contigH-paniculata_contig5614:7032..13247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5614.13138.1mRNA_H-paniculata_contig5614.13138.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5614 7032..13247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5614.13138.1 ID=prot_H-paniculata_contig5614.13138.1|Name=mRNA_H-paniculata_contig5614.13138.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=497bp
PVNPYRQIKVHVLITKLEDNSGEHTEKNFELVADAILHHLGPSELPTTRA
LALDAAQTFVQRVLSSRSKDKKASKIRRRAFKGLLSNLIPLMLDCLKPGG
GSNSNTLASSKKSSSTGDLGNGENGGVSAGTASRNLTGSMSEHGVDGVGG
EVVVLHYYHQYLLKVAVLETMHRFLMVLRALFKPPQSTNVQKAVAPLLDA
EEDVLRDKAAAVLGQLSLCGKDNLKWVNIAIKVSLEAHNLLHDAWADEAA
GQIPSKRLQTIMGDHPLLPPLQQTFEPGDAEAHVRAVGRRFPALCKLLAT
LISASPPKSHDADTAHGEPQQEQGASSKVVDQRPLLVSLTISLVQRVLRM
GPQASSRCYNEVADDGRGRGAAASPGTLSPALAAGVTTQLLPPAVTLLEA
LVASSKLEDVMKDQQEAVCECMGQAVAQQMPVQGGVRAAVYRVMAFVIRY
LQPQYAAAALGVPVLPLLFNEALLALGNRVSLHPLNTKRHAAPVRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold