prot_H-paniculata_contig55817.13091.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig55817.13091.1
Unique Nameprot_H-paniculata_contig55817.13091.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length130
Homology
BLAST of mRNA_H-paniculata_contig55817.13091.1 vs. uniprot
Match: A0A6H5JPL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL4_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 4.620e-20
Identity = 57/137 (41.61%), Postives = 79/137 (57.66%), Query Frame = 0
Query:    1 MVLAIAAEYNLECWQLDHNTAFLNADDDEEVYVKIAPECEDLHE-NGVPMVMRLLNSLCGLRQRPSNY-------NAIVVLTLYVDDVLLLGKDLKVLGRINQKLMSRFSMTDMGDVSLVLGMGVTRDHTKGALTIS 129
            M  AI    N   +QLD   AFLNA  D +VYV+ AP     +   G PMV +L  SL GL Q P+ +       N IV+LT+YVDD+L+ G D +++ +  ++L  RF M DMG+   +LG+ V RD+ +G L IS
Sbjct:    1 MTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWKDTLDGGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMADMGEGKRILGIDVERDYEQGTLAIS 137          
BLAST of mRNA_H-paniculata_contig55817.13091.1 vs. uniprot
Match: A0A6H5KDK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK0_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 6.870e-19
Identity = 60/141 (42.55%), Postives = 81/141 (57.45%), Query Frame = 0
Query:    1 MVLAIAAEYNLECWQLDHNTAFLNADDDEEVYVKIAPECEDLHE-NGVPMVMRLLNSLCGLRQ------RPSNY-----NAIVVLTLYVDDVLLLGKDLKVLGRINQKLMSRFSMTDMGDVSLVLGMGVTRDHTKGALTIS 129
            M  AI   +N   +QLD   AFLNA  D +VYV+ AP     +   G PMV +L  SL GL Q       P  Y     N IV+LT+YVDD+L+ G D +++ +  ++L  RF MTDMG+V  +LG+ V RD+ +G L IS
Sbjct:   71 MTCAIGCHHNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAIS 211          
BLAST of mRNA_H-paniculata_contig55817.13091.1 vs. uniprot
Match: A0A6H5JG80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG80_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 5.290e-18
Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = 0
Query:    1 MVLAIAAEYNLECWQLDHNTAFLNADDDEEVYVKIAPECEDLHE-NGVPMVMRLLNSLCGLRQRPSNYN-----------AIVVLTLYVDDVLLLGKDLKVLGRINQKLMSRFSMTDMGDVSLVLGMGVTRDHTKGALTIS 129
            M  AI    N   +QLD   AFLNA  D +VYV+ AP     +   G  +V +L  SL GL Q P+ +N            IV+LT+YVDD+L+ G D +++ +  ++L  RF MTDMG+V  +LG+ V RD+ +G L IS
Sbjct:   87 MTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGELIVYKLERSLYGLSQSPALWNDTLDESLTVGNIIVILTVYVDDILITGGDHQLVDQTKKELTDRFEMTDMGEVKRILGIDVERDYQRGTLAIS 227          
BLAST of mRNA_H-paniculata_contig55817.13091.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 3.190e-17
Identity = 59/158 (37.34%), Postives = 81/158 (51.27%), Query Frame = 0
Query:    1 MVLAIAAEYNLECWQLDHNTAFLNADDDEEVYVKIAPECEDLHE-NGVPMVMRLLNSLCGLRQRPSNYN----------------------------AIVVLTLYVDDVLLLGKDLKVLGRINQKLMSRFSMTDMGDVSLVLGMGVTRDHTKGALTIS 129
            M  AI    N   +QLD   AFLNA  D +VYV+ AP     +   G PMV +L  SL GL Q P+ +N                             IV+LT+YVDD+L+ G D +++ +  ++L  RF MTDMG+V  +LG+ V RD+ +G L IS
Sbjct:  660 MTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESITAFGWKRTQSDPCVYAYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAIS 817          
BLAST of mRNA_H-paniculata_contig55817.13091.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 3.190e-17
Identity = 59/158 (37.34%), Postives = 81/158 (51.27%), Query Frame = 0
Query:    1 MVLAIAAEYNLECWQLDHNTAFLNADDDEEVYVKIAPECEDLHE-NGVPMVMRLLNSLCGLRQRPSNYN----------------------------AIVVLTLYVDDVLLLGKDLKVLGRINQKLMSRFSMTDMGDVSLVLGMGVTRDHTKGALTIS 129
            M  AI    N   +QLD   AFLNA  D +VYV+ AP     +   G PMV +L  SL GL Q P+ +N                             IV+LT+YVDD+L+ G D +++ +  ++L  RF MTDMG+V  +LG+ V RD+ +G L IS
Sbjct:  435 MTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAIS 592          
BLAST of mRNA_H-paniculata_contig55817.13091.1 vs. uniprot
Match: A0A6H5K066_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K066_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 7.690e-17
Identity = 58/157 (36.94%), Postives = 81/157 (51.59%), Query Frame = 0
Query:    1 MVLAIAAEYNLECWQLDHNTAFLNADDDEEVYVKIAPECEDLHE-NGVPMVMRLLNSLCGLRQRPSNYN----------------------------AIVVLTLYVDDVLLLGKDLKVLGRINQKLMSRFSMTDMGDVSLVLGMGVTRDHTKGALTI 128
            M  AI    N   +QLD   AFLNA  D +VYV+ AP     +   G PMV +L  SL GL Q P+ +N                             IV+LT+YVDD+L++G D +++ +  ++L  RF MTDMG+V  VLG+ V R++ +G L I
Sbjct:   71 MTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILIIGGDQQLVDQKKKELTDRFEMTDMGEVKRVLGIDVQRNYEQGTLAI 227          
BLAST of mRNA_H-paniculata_contig55817.13091.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 9.760e-17
Identity = 59/158 (37.34%), Postives = 80/158 (50.63%), Query Frame = 0
Query:    1 MVLAIAAEYNLECWQLDHNTAFLNADDDEEVYVKIAPECEDLHE-NGVPMVMRLLNSLCGLRQRPSNYN----------------------------AIVVLTLYVDDVLLLGKDLKVLGRINQKLMSRFSMTDMGDVSLVLGMGVTRDHTKGALTIS 129
            M  AI    N   +QLD   AFLNA  D  VYV+ AP     +   G PMV +L  SL GL Q P+ +N                             IV+LT+YVDD+L+ G D +++ +  ++L  RF MTDMG+V  +LG+ V RD+ +G L IS
Sbjct:   71 MTCAIGCHNNWPIYQLDVVGAFLNALCDRYVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAIS 228          
BLAST of mRNA_H-paniculata_contig55817.13091.1 vs. uniprot
Match: A0A6H5KH19_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH19_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 1.060e-16
Identity = 58/158 (36.71%), Postives = 80/158 (50.63%), Query Frame = 0
Query:    1 MVLAIAAEYNLECWQLDHNTAFLNADDDEEVYVKIAPECEDLHE-NGVPMVMRLLNSLCGLRQRPSNYN----------------------------AIVVLTLYVDDVLLLGKDLKVLGRINQKLMSRFSMTDMGDVSLVLGMGVTRDHTKGALTIS 129
            M  AI    N   +QLD   AFLNA  D +VYV+ AP     +   G PMV +L  SL GL Q P+ +N                             IV+LT+YVDD+L+ G D +++ + N++L  RF M DMG+V  +LG+ V RD+ +G L  S
Sbjct:  240 MTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPAVWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKNKELTDRFEMADMGEVKRILGIDVQRDYEQGTLATS 397          
BLAST of mRNA_H-paniculata_contig55817.13091.1 vs. uniprot
Match: A0A6H5KTY2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY2_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.920e-16
Identity = 58/158 (36.71%), Postives = 81/158 (51.27%), Query Frame = 0
Query:    1 MVLAIAAEYNLECWQLDHNTAFLNADDDEEVYVKIAPECEDLHE-NGVPMVMRLLNSLCGLRQRPSNYN----------------------------AIVVLTLYVDDVLLLGKDLKVLGRINQKLMSRFSMTDMGDVSLVLGMGVTRDHTKGALTIS 129
            M  AI    N   +QLD   AFLNA  D +VYV+ AP     +   G PMV +L  SL GL Q P+ +N                            +IV+LT+YVDD+L+ G D +++ +  ++L  RF MTDMG+V  +LG+ V RD+ +  L IS
Sbjct:  279 MTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNSIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVPRDYEQRTLAIS 436          
BLAST of mRNA_H-paniculata_contig55817.13091.1 vs. uniprot
Match: A0A6H5K7T8_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7T8_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 2.040e-16
Identity = 58/158 (36.71%), Postives = 80/158 (50.63%), Query Frame = 0
Query:    1 MVLAIAAEYNLECWQLDHNTAFLNADDDEEVYVKIAPECEDL-HENGVPMVMRLLNSLCGLRQRPSNY----------------------------NAIVVLTLYVDDVLLLGKDLKVLGRINQKLMSRFSMTDMGDVSLVLGMGVTRDHTKGALTIS 129
            M  AI    N   +QLD   AFLNA  D +VYV+ AP      +  G PM+  L  SL GL Q P+ +                            N IV+LT+YVDD+L+ G D +++ +  ++L  RF MTDMG+V  +LG+ V RD+ +G L IS
Sbjct:  478 MTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNYATGEPMMYELERSLYGLSQYPALWKDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAIS 635          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig55817.13091.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPL4_9PHAE4.620e-2041.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDK0_9PHAE6.870e-1942.55Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JG80_9PHAE5.290e-1840.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1R7_9PHAE3.190e-1737.34Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KE92_9PHAE3.190e-1737.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K066_9PHAE7.690e-1736.94Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQD0_9PHAE9.760e-1737.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KH19_9PHAE1.060e-1636.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KTY2_9PHAE1.920e-1636.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K7T8_9PHAE2.040e-1636.71Integrase catalytic domain-containing protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..69
e-value: 3.7E-10
score: 39.9
coord: 71..122
e-value: 1.4E-9
score: 37.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig55817contigH-paniculata_contig55817:550..1017 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig55817.13091.1mRNA_H-paniculata_contig55817.13091.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig55817 484..1089 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig55817.13091.1 ID=prot_H-paniculata_contig55817.13091.1|Name=mRNA_H-paniculata_contig55817.13091.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=130bp
MVLAIAAEYNLECWQLDHNTAFLNADDDEEVYVKIAPECEDLHENGVPMV
MRLLNSLCGLRQRPSNYNAIVVLTLYVDDVLLLGKDLKVLGRINQKLMSR
FSMTDMGDVSLVLGMGVTRDHTKGALTIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2