prot_H-paniculata_contig5577.13084.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig5577.13084.1
Unique Name	prot_H-paniculata_contig5577.13084.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	125

Homology

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BLAST of mRNA_H-paniculata_contig5577.13084.1 vs. uniprot
Match: D8LE03_ECTSI (PUA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE03_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 8.090e-74
Identity = 110/124 (88.71%), Postives = 117/124 (94.35%), Query Frame = 0

Query:    1 MSLICCDGVPLFFQQRDGIIFPTLRILHKYPNMMPTMRVDKGAISFVMNGANIMCAGFTSKGGRMETPLEAGSPVCILAEGKKVALAVGVTAMSTADIKSVNKGSGVENLHYLGDGLFFTKELE 124
            +SLICCDGVPLFFQQRDG IFPTLRILHKYPNMMPTMRVDKGAISFVMNGANIMC GFTSKGGR++TPLEAG+ VCILAEGKKVALAVG T MSTADI+SVNKG GV+NLHYLGDGLF TKEL+
Sbjct:   58 VSLICCDGVPLFFQQRDGHIFPTLRILHKYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIDTPLEAGAAVCILAEGKKVALAVGQTTMSTADIQSVNKGIGVDNLHYLGDGLFGTKELD 181

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BLAST of mRNA_H-paniculata_contig5577.13084.1 vs. uniprot
Match: A0A835Z9W5_9STRA (PUA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W5_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.370e-52
Identity = 79/124 (63.71%), Postives = 101/124 (81.45%), Query Frame = 0

Query:    1 MSLICCDGVPLFFQQRDGIIFPTLRILHKYPNMMPTMRVDKGAISFVMNGANIMCAGFTSKGGRMETPLEAGSPVCILAEGKKVALAVGVTAMSTADIKSVNKGSGVENLHYLGDGLFFTKELE 124
            +SLIC D   +FFQ+RDG IFPTLR++H+YPN MP M+VDKGAI F++NG+NIMC GFTS GGRME  +EAG  VCI+AEGK+ ALA+G+T MST +I+  NKG GV+N+HYLGDGL+   +L+
Sbjct:   59 VSLICRDNKIMFFQERDGPIFPTLRLVHQYPNFMPKMQVDKGAIKFILNGSNIMCPGFTSAGGRMEESIEAGQAVCIMAEGKQHALAIGLTVMSTDEIREQNKGIGVDNMHYLGDGLWGVPDLD 182

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BLAST of mRNA_H-paniculata_contig5577.13084.1 vs. uniprot
Match: A0A7S0RZE1_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RZE1_9CHLO)

HSP 1 Score: 155 bits (392), Expect = 8.520e-46
Identity = 74/124 (59.68%), Postives = 94/124 (75.81%), Query Frame = 0

Query:    1 MSLICCDGVPLFFQQRDGIIFPTLRILHKYPNMMPTMRVDKGAISFVMNGANIMCAGFTSKGGRMETPLEAGSPVCILAEGKKVALAVGVTAMSTADIKSVNKGSGVENLHYLGDGLFFTKELE 124
            + ++  D  PLFFQ+RDG   PTLRILH+YP+MM  +R DKGAI FV++GANIMC G TS G  M    +AG PV I AEGK  A+A+G+T MSTADIKSVNKG GV+NLH+L DGL+ T++++
Sbjct:   61 VQMVIIDNTPLFFQERDGPWCPTLRILHQYPDMMKKLRADKGAIKFVLSGANIMCPGLTSPGATMHDEADAGEPVAIYAEGKDTAMAIGLTKMSTADIKSVNKGIGVDNLHFLLDGLWRTQKID 184

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BLAST of mRNA_H-paniculata_contig5577.13084.1 vs. uniprot
Match: A0A1Y1I3Z2_KLENI (Pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I3Z2_KLENI)

HSP 1 Score: 151 bits (382), Expect = 2.560e-44
Identity = 71/124 (57.26%), Postives = 94/124 (75.81%), Query Frame = 0

Query:    1 MSLICCDGVPLFFQQRDGIIFPTLRILHKYPNMMPTMRVDKGAISFVMNGANIMCAGFTSKGGRMETPLEAGSPVCILAEGKKVALAVGVTAMSTADIKSVNKGSGVENLHYLGDGLFFTKELE 124
            ++L+  + VPLFF  RDG   PTLR+LH+YP +M  +RVD+GAI FV++GANIMC G TSKGG +E  ++A  PV I AEGK++ALA+G+T MST DI  +NKG GV+N+HYL DGL+ T  L+
Sbjct:   58 LNLVVINNVPLFFNIRDGPYMPTLRLLHQYPTVMKRVRVDRGAIKFVLSGANIMCPGLTSKGGALEDEVDAEQPVAIHAEGKELALAIGMTKMSTGDIAKINKGIGVDNIHYLNDGLWKTLHLD 181

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BLAST of mRNA_H-paniculata_contig5577.13084.1 vs. uniprot
Match: A0A7S2Y120_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y120_9STRA)

HSP 1 Score: 150 bits (380), Expect = 5.150e-44
Identity = 72/124 (58.06%), Postives = 91/124 (73.39%), Query Frame = 0

Query:    1 MSLICCDGVPLFFQQRDGIIFPTLRILHKYPNMMPTMRVDKGAISFVMNGANIMCAGFTSKGGRMETPLEAGSPVCILAEGKKVALAVGVTAMSTADIKSVNKGSGVENLHYLGDGLFFTKELE 124
            + LIC  G PLFFQ RDG  FP LR++H+YP   PTM+VD GAI FVM GANIMC GFTSKGG +    EAG+ V I+AE KK ALAVG+T +ST +I+   +G GV+N+HYL DGL+ T+ ++
Sbjct:   58 VQLICHGGKPLFFQCRDGPFFPCLRLVHQYPGCWPTMQVDLGAIPFVMGGANIMCPGFTSKGGNIPQDYEAGTAVIIMAENKKQALAVGITKLSTEEIRKQKRGIGVDNVHYLNDGLWLTQTID 181

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BLAST of mRNA_H-paniculata_contig5577.13084.1 vs. uniprot
Match: C1EGF2_MICCC (PUA domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EGF2_MICCC)

HSP 1 Score: 150 bits (379), Expect = 8.480e-44
Identity = 73/124 (58.87%), Postives = 91/124 (73.39%), Query Frame = 0

Query:    1 MSLICCDGVPLFFQQRDGIIFPTLRILHKYPNMMPTMRVDKGAISFVMNGANIMCAGFTSKGGRMETPLEAGSPVCILAEGKKVALAVGVTAMSTADIKSVNKGSGVENLHYLGDGLFFTKELE 124
            +S++  DGVP FFQ RDG  FP LR+LH+YP+MMP +RVDKGAI FV  GANIMC G TS G  +   ++   PV I AEGK+ ALAVG+T MSTADIKSVNKG GV+ +H+L DGL+   + +
Sbjct:   62 ISVVLVDGVPKFFQLRDGAYFPHLRVLHEYPDMMPKLRVDKGAIRFVFQGANIMCPGLTSPGAEIIDEVDEDVPVAIYAEGKQHALAVGITKMSTADIKSVNKGIGVDTVHHLNDGLWHCAKFD 185

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BLAST of mRNA_H-paniculata_contig5577.13084.1 vs. uniprot
Match: A9NLI5_PICSI (PUA domain-containing protein n=4 Tax=Pinidae TaxID=3313 RepID=A9NLI5_PICSI)

HSP 1 Score: 150 bits (378), Expect = 1.040e-43
Identity = 71/123 (57.72%), Postives = 93/123 (75.61%), Query Frame = 0

Query:    1 MSLICCDGVPLFFQQRDGIIFPTLRILHKYPNMMPTMRVDKGAISFVMNGANIMCAGFTSKGGRMETPLEAGSPVCILAEGKKVALAVGVTAMSTADIKSVNKGSGVENLHYLGDGLFFTKEL 123
            ++LI  + VPLFF  RDG   PTLR+LH+YPN+M  M+VD+GAI FV+ GANIMC G TS GG ++  + A SPV ++AEGK+ ALA+G T MS  DIK++NKG GV+N+HYL DGL+ T +L
Sbjct:   58 INLILVNNVPLFFNVRDGPYMPTLRLLHQYPNIMKKMQVDRGAIKFVLAGANIMCPGLTSPGGALDDDIPAESPVAVMAEGKENALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKTVQL 180

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BLAST of mRNA_H-paniculata_contig5577.13084.1 vs. uniprot
Match: I0Z5M2_COCSC (PUA domain-containing protein n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z5M2_COCSC)

HSP 1 Score: 149 bits (376), Expect = 2.210e-43
Identity = 71/118 (60.17%), Postives = 89/118 (75.42%), Query Frame = 0

Query:    1 MSLICCDGVPLFFQQRDGIIFPTLRILHKYPNMMPTMRVDKGAISFVMNGANIMCAGFTSKGGRMETPLEAGSPVCILAEGKKVALAVGVTAMSTADIKSVNKGSGVENLHYLGDGLF 118
            + +IC +G PLFF QR+   FPTLR+LHKYP+MMP +R D GAI FV++GANIMC G TS G  +   ++A SPV I AEGK+ A+AVG+T MST DIK +NKG  VEN+HYL DGL+
Sbjct:   60 VQVICINGEPLFFAQREDNWFPTLRLLHKYPDMMPKLRADTGAIKFVLSGANIMCPGLTSPGATLHDEVDAESPVAIYAEGKEHAMAVGLTKMSTKDIKEINKGIAVENVHYLNDGLW 177

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BLAST of mRNA_H-paniculata_contig5577.13084.1 vs. uniprot
Match: A0A087SP38_AUXPR (Malignant T-cell-amplified sequence 1 n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SP38_AUXPR)

HSP 1 Score: 149 bits (376), Expect = 2.560e-43
Identity = 70/124 (56.45%), Postives = 93/124 (75.00%), Query Frame = 0

Query:    1 MSLICCDGVPLFFQQRDGIIFPTLRILHKYPNMMPTMRVDKGAISFVMNGANIMCAGFTSKGGRMETPLEAGSPVCILAEGKKVALAVGVTAMSTADIKSVNKGSGVENLHYLGDGLFFTKELE 124
            + L+  D V LFF  RDG  FPTLR+LHKYP+MMP +R D+GAI FV++GANIMC G TS G  M   +EAG+PV +  EG++ A+A+G T MSTA++++ NKG GVENLHYL DGL+ T +++
Sbjct:   65 VQLLVADRVVLFFSTRDGGWFPTLRLLHKYPDMMPRLRADQGAIKFVLSGANIMCPGLTSPGATMHDEVEAGTPVALYGEGREHAMAIGYTTMSTAEMRAQNKGIGVENLHYLNDGLWKTLKID 188

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BLAST of mRNA_H-paniculata_contig5577.13084.1 vs. uniprot
Match: A0A251KDD0_MANES (PUA domain-containing protein n=8 Tax=rosids TaxID=71275 RepID=A0A251KDD0_MANES)

HSP 1 Score: 148 bits (374), Expect = 4.190e-43
Identity = 69/124 (55.65%), Postives = 94/124 (75.81%), Query Frame = 0

Query:    1 MSLICCDGVPLFFQQRDGIIFPTLRILHKYPNMMPTMRVDKGAISFVMNGANIMCAGFTSKGGRMETPLEAGSPVCILAEGKKVALAVGVTAMSTADIKSVNKGSGVENLHYLGDGLFFTKELE 124
            ++L+  + VPLFF  RDG   PTLR+LH+YPN+M  ++VD+GAI FV+ GANIMC G TS GG ++  +EA +PV I+AEGK+ ALA+G T MS  DIK++NKG GV+N+HYL DGL+  + L+
Sbjct:   58 LNLVMVNSVPLFFNVRDGPYMPTLRLLHQYPNIMKKLQVDRGAIRFVLAGANIMCPGLTSPGGALDEEVEAETPVAIMAEGKEHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKMERLD 181

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig5577.13084.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig5577.13084.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LE03_ECTSI	8.090e-74	88.71	PUA domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A835Z9W5_9STRA	2.370e-52	63.71	PUA-like domain-containing protein n=1 Tax=Tribone...	[more]
A0A7S0RZE1_9CHLO	8.520e-46	59.68	Hypothetical protein n=1 Tax=Chlamydomonas leiostr...	[more]
A0A1Y1I3Z2_KLENI	2.560e-44	57.26	Pseudouridine synthase and archaeosine transglycos...	[more]
A0A7S2Y120_9STRA	5.150e-44	58.06	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
C1EGF2_MICCC	8.480e-44	58.87	PUA domain-containing protein n=2 Tax=Micromonas T...	[more]
A9NLI5_PICSI	1.040e-43	57.72	PUA domain-containing protein n=4 Tax=Pinidae TaxI...	[more]
I0Z5M2_COCSC	2.210e-43	60.17	PUA domain-containing protein n=2 Tax=Coccomyxa Ta...	[more]
A0A087SP38_AUXPR	2.560e-43	56.45	Malignant T-cell-amplified sequence 1 n=2 Tax=Auxe...	[more]
A0A251KDD0_MANES	4.190e-43	55.65	PUA domain-containing protein n=8 Tax=rosids TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002478	PUA domain	SMART	SM00359	pua_5	coord: 35..114 e-value: 1.1E-8 score: 44.8
IPR002478	PUA domain	PFAM	PF01472	PUA	coord: 36..113 e-value: 8.5E-15 score: 54.5
IPR002478	PUA domain	PROSITE	PS50890	PUA	coord: 34..114 score: 15.036
IPR041366	Pre-PUA domain	PFAM	PF17832	Pre-PUA	coord: 2..31 e-value: 5.3E-8 score: 33.4
IPR036974	PUA domain superfamily	GENE3D	2.30.130.10		coord: 28..121 e-value: 3.5E-29 score: 102.5
IPR016437	MCT-1/Tma20	PIRSF	PIRSF005067	Tma_RNA-bind	coord: 1..123 e-value: 6.8E-42 score: 141.4
IPR016437	MCT-1/Tma20	PANTHER	PTHR22798	MCT-1 PROTEIN	coord: 2..121
IPR004521	Uncharacterised domain CHP00451	TIGRFAM	TIGR00451	TIGR00451	coord: 5..115 e-value: 3.7E-25 score: 86.2
None	No IPR available	PANTHER	PTHR22798:SF0	MALIGNANT T-CELL-AMPLIFIED SEQUENCE 1	coord: 2..121
IPR015947	PUA-like superfamily	SUPERFAMILY	88697	PUA domain-like	coord: 34..118

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig5577	contig	H-paniculata_contig5577:4643..8409 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig5577.13084.1	mRNA_H-paniculata_contig5577.13084.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig5577 931..9451 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig5577.13084.1 ID=prot_H-paniculata_contig5577.13084.1|Name=mRNA_H-paniculata_contig5577.13084.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=125bp
MSLICCDGVPLFFQQRDGIIFPTLRILHKYPNMMPTMRVDKGAISFVMNG
ANIMCAGFTSKGGRMETPLEAGSPVCILAEGKKVALAVGVTAMSTADIKS
VNKGSGVENLHYLGDGLFFTKELE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002478	PUA
IPR041366	Pre-PUA
IPR036974	PUA_sf
IPR016437	MCT-1/Tma20
IPR004521	Uncharacterised_CHP00451
IPR015947	PUA-like_sf