prot_H-paniculata_contig5555.13056.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5555.13056.1
Unique Nameprot_H-paniculata_contig5555.13056.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length150
Homology
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BLAST of mRNA_H-paniculata_contig5555.13056.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 5.830e-26
Identity = 52/120 (43.33%), Postives = 70/120 (58.33%), Query Frame = 0 
Query:   53 ICAVSRPDPEHDFDGKIGSWHVCTVKEAPRTTSRRARG-----------------------ETYEVDDTIDAEWYREWYVNDLLPEAKKKIWWLDGEEVIAQQDGATPRTGKGAPQALNN 149
            I A +RPDP HDFDGKIG W +C ++ A R++ +                           E YE D TIDAEWY++WY++ LLP  K+K+ WL  + V+ QQDGA+P TGKG P+ LN+
Sbjct:  197 IVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNS 316
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5555.13056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE5.830e-2643.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47169FAMILY NOT NAMEDcoord: 52..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5555contigH-paniculata_contig5555:11824..12273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5555.13056.1mRNA_H-paniculata_contig5555.13056.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5555 11824..12273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5555.13056.1 ID=prot_H-paniculata_contig5555.13056.1|Name=mRNA_H-paniculata_contig5555.13056.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=150bp
MAEHSRQASTQSTLTRRGSTSFAIRKRCECSPGKKKLARSRCSIRVTSPK
CFICAVSRPDPEHDFDGKIGSWHVCTVKEAPRTTSRRARGETYEVDDTID
AEWYREWYVNDLLPEAKKKIWWLDGEEVIAQQDGATPRTGKGAPQALNNP
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