prot_H-paniculata_contig5509.12982.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5509.12982.1
Unique Nameprot_H-paniculata_contig5509.12982.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length86
Homology
BLAST of mRNA_H-paniculata_contig5509.12982.1 vs. uniprot
Match: D8LTC1_ECTSI (Nucleolar GTP-binding protein 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTC1_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 2.470e-45
Identity = 80/86 (93.02%), Postives = 85/86 (98.84%), Query Frame = 0
Query:    1 MYKAKTIRDKKGKIVGGAYMMKNRAGDQAITAETGRVAPDRRWFGNTRVIKQEELDKFREEMTTRSTDPYNVILRRKKLPMGLLQE 86
            MYKAK IRDKKGK+VGGAYMMKNR+GDQAITAETGRVAPDRRWFGNTRVIKQEELDKFREEM+TRSTDPY+V+LRRKKLPMGLLQE
Sbjct:   36 MYKAKGIRDKKGKLVGGAYMMKNRSGDQAITAETGRVAPDRRWFGNTRVIKQEELDKFREEMSTRSTDPYSVVLRRKKLPMGLLQE 121          
BLAST of mRNA_H-paniculata_contig5509.12982.1 vs. uniprot
Match: K0SJ72_THAOC (NGP1NT domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SJ72_THAOC)

HSP 1 Score: 118 bits (296), Expect = 2.260e-32
Identity = 54/82 (65.85%), Postives = 70/82 (85.37%), Query Frame = 0
Query:    5 KTIRDKKGKIVGGAYMMKNRAGDQAITAETGRVAPDRRWFGNTRVIKQEELDKFREEMTTRSTDPYNVILRRKKLPMGLLQE 86
            K IR+K+GK+VGG +MM +RAGD  ITA TGR+APDRRWFGNTRV+   ELD+FREEMT+   DPY+V+++RK+LPMGLL++
Sbjct:   59 KAIRNKEGKVVGGQFMMGDRAGDTKITAATGRIAPDRRWFGNTRVVNPTELDRFREEMTSSMADPYSVVVKRKQLPMGLLRD 140          
BLAST of mRNA_H-paniculata_contig5509.12982.1 vs. uniprot
Match: A0A448ZMX9_9STRA (Nucleolar GTP-binding protein 2 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZMX9_9STRA)

HSP 1 Score: 126 bits (316), Expect = 4.910e-32
Identity = 57/86 (66.28%), Postives = 75/86 (87.21%), Query Frame = 0
Query:    1 MYKAKTIRDKKGKIVGGAYMMKNRAGDQAITAETGRVAPDRRWFGNTRVIKQEELDKFREEMTTRSTDPYNVILRRKKLPMGLLQE 86
            +YK++ IR+KKG ++GG +MM NRAGD+ ITAETGR+APDRRWFGNTRV+  ++LD FR+EMT +  DPY+V+L+RKKLPMGLL+E
Sbjct:   42 LYKSRAIRNKKGIVIGGDFMMGNRAGDREITAETGRIAPDRRWFGNTRVVDPKQLDTFRQEMTEKVADPYSVVLKRKKLPMGLLRE 127          
BLAST of mRNA_H-paniculata_contig5509.12982.1 vs. uniprot
Match: W7U800_9STRA (Nucleolar GTP-binding protein 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U800_9STRA)

HSP 1 Score: 125 bits (315), Expect = 8.360e-32
Identity = 60/85 (70.59%), Postives = 73/85 (85.88%), Query Frame = 0
Query:    1 MYKA-KTIRDKKGKIVGGAYMMKNRAGDQAITAETGRVAPDRRWFGNTRVIKQEELDKFREEMTTRSTDPYNVILRRKKLPMGLL 84
            MY+  K IR+KKGK+VGG  MMK++ G QAIT  TGRV PDRRWFGNTRVI QE+LD+FREEMTTR+ DP++++LRRKK+PMGLL
Sbjct:   43 MYRGGKPIRNKKGKVVGGTLMMKDKVGGQAITGATGRVQPDRRWFGNTRVISQEDLDRFREEMTTRAADPFSIVLRRKKIPMGLL 127          
BLAST of mRNA_H-paniculata_contig5509.12982.1 vs. uniprot
Match: A0A6T7JTR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7JTR6_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.260e-31
Identity = 53/80 (66.25%), Postives = 68/80 (85.00%), Query Frame = 0
Query:    5 KTIRDKKGKIVGGAYMMKNRAGDQAITAETGRVAPDRRWFGNTRVIKQEELDKFREEMTTRSTDPYNVILRRKKLPMGLL 84
            K +R+K+G +VGG +MMK+RAGD+ ITA TGR+ PDRRWFGNTRV+    LDKFREEMT + +DPY+V+L+RK+LPMGLL
Sbjct:   55 KAVRNKEGTLVGGQFMMKDRAGDREITAATGRIEPDRRWFGNTRVVDPTSLDKFREEMTDKVSDPYSVVLKRKQLPMGLL 134          
BLAST of mRNA_H-paniculata_contig5509.12982.1 vs. uniprot
Match: A0A7S2SRE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRE7_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.920e-31
Identity = 54/82 (65.85%), Postives = 68/82 (82.93%), Query Frame = 0
Query:    5 KTIRDKKGKIVGGAYMMKNRAGDQAITAETGRVAPDRRWFGNTRVIKQEELDKFREEMTTRSTDPYNVILRRKKLPMGLLQE 86
            K IR+KKG++VGG  +MK RAG Q ITA TGR+AP+R+WFGNTR +  +ELDKFR+EM  ++ DPY++ILRRKKLPMGLL E
Sbjct:    4 KAIRNKKGEVVGGDLIMKTRAGGQEITAATGRIAPNRKWFGNTRTVDPKELDKFRDEMRVKAADPYSIILRRKKLPMGLLVE 85          
BLAST of mRNA_H-paniculata_contig5509.12982.1 vs. uniprot
Match: A0A1E7EVR0_9STRA (Nucleolar GTP-binding protein 2 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVR0_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.450e-31
Identity = 56/86 (65.12%), Postives = 74/86 (86.05%), Query Frame = 0
Query:    1 MYKAKTIRDKKGKIVGGAYMMKNRAGDQAITAETGRVAPDRRWFGNTRVIKQEELDKFREEMTTRSTDPYNVILRRKKLPMGLLQE 86
            +YK++ IR+KKG I+GG +MM +RAGD+ IT ETGR+APDRRWFGNTRV+  ++LD FR+EMT +  DPY+V+L+RKKLPMGLL+E
Sbjct:   47 LYKSRAIRNKKGTIIGGDFMMGDRAGDRDITGETGRIAPDRRWFGNTRVVDPKQLDTFRQEMTEKVADPYSVVLKRKKLPMGLLRE 132          
BLAST of mRNA_H-paniculata_contig5509.12982.1 vs. uniprot
Match: A0A7S3V5H0_9STRA (Nucleolar GTP-binding protein 2 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5H0_9STRA)

HSP 1 Score: 124 bits (310), Expect = 3.680e-31
Identity = 57/82 (69.51%), Postives = 71/82 (86.59%), Query Frame = 0
Query:    5 KTIRDKKGKIVGGAYMMKNRAGDQAITAETGRVAPDRRWFGNTRVIKQEELDKFREEMTTRSTDPYNVILRRKKLPMGLLQE 86
            K IR+K+G +VGG +MM +RAGD+ IT  TGR+APDRRWFGNTRV+ Q ELDKFREEMT++  DPY+V+L+RKKLPMGLLQ+
Sbjct:   58 KAIRNKEGTVVGGQFMMSDRAGDREITTATGRIAPDRRWFGNTRVVGQTELDKFREEMTSKVADPYSVVLKRKKLPMGLLQD 139          
BLAST of mRNA_H-paniculata_contig5509.12982.1 vs. uniprot
Match: A0A7R9UBE2_9STRA (Nucleolar GTP-binding protein 2 (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBE2_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.480e-30
Identity = 58/87 (66.67%), Postives = 72/87 (82.76%), Query Frame = 0
Query:    1 MYKA-KTIRDKKGKIVGGAYMMKNRAGDQAITAETGRVAPDRRWFGNTRVIKQEELDKFREEMTTRSTDPYNVILRRKKLPMGLLQE 86
            MY++ K IR+KKG+++GG   M +RAGD  ITA+TGRV PDRRWFGNTR +  EELD FRE+MTT++ DPY+VILRRKK+PMGLL E
Sbjct:   46 MYRSGKAIRNKKGEVIGGTLQMADRAGDVQITAQTGRVQPDRRWFGNTRTVAPEELDAFREQMTTKAADPYSVILRRKKVPMGLLAE 132          
BLAST of mRNA_H-paniculata_contig5509.12982.1 vs. uniprot
Match: A0A7S3DPC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DPC3_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.620e-30
Identity = 53/82 (64.63%), Postives = 67/82 (81.71%), Query Frame = 0
Query:    5 KTIRDKKGKIVGGAYMMKNRAGDQAITAETGRVAPDRRWFGNTRVIKQEELDKFREEMTTRSTDPYNVILRRKKLPMGLLQE 86
            K IR+++GK+V GA+MMK+RAGD+ I A TGR+ PDRRWFGNTRV+   ELD FR+EMT    DPY+V+L+RKK+PMGLL E
Sbjct:   49 KAIRNREGKVVAGAFMMKDRAGDRKIDASTGRIQPDRRWFGNTRVVGSTELDNFRQEMTDAVADPYSVVLKRKKVPMGLLNE 130          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5509.12982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTC1_ECTSI2.470e-4593.02Nucleolar GTP-binding protein 2 n=2 Tax=Ectocarpus... [more]
K0SJ72_THAOC2.260e-3265.85NGP1NT domain-containing protein (Fragment) n=1 Ta... [more]
A0A448ZMX9_9STRA4.910e-3266.28Nucleolar GTP-binding protein 2 n=1 Tax=Pseudo-nit... [more]
W7U800_9STRA8.360e-3270.59Nucleolar GTP-binding protein 2 n=2 Tax=Monodopsid... [more]
A0A6T7JTR6_9STRA1.260e-3166.25Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S2SRE7_9STRA2.920e-3165.85Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A1E7EVR0_9STRA3.450e-3165.12Nucleolar GTP-binding protein 2 n=1 Tax=Fragilario... [more]
A0A7S3V5H0_9STRA3.680e-3169.51Nucleolar GTP-binding protein 2 n=1 Tax=Chaetocero... [more]
A0A7R9UBE2_9STRA1.480e-3066.67Nucleolar GTP-binding protein 2 (Fragment) n=1 Tax... [more]
A0A7S3DPC3_9STRA2.620e-3064.63Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012971Nucleolar GTP-binding protein 2, N-terminal domainPFAMPF08153NGP1NTcoord: 1..86
e-value: 9.4E-33
score: 113.1
IPR024929Nucleolar GTP-binding protein 2PANTHERPTHR11089:SF9NUCLEOLAR GTP-BINDING PROTEIN 2coord: 1..86
NoneNo IPR availablePANTHERPTHR11089GTP-BINDING PROTEIN-RELATEDcoord: 1..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5509contigH-paniculata_contig5509:7441..8651 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5509.12982.1mRNA_H-paniculata_contig5509.12982.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5509 7423..8651 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5509.12982.1 ID=prot_H-paniculata_contig5509.12982.1|Name=mRNA_H-paniculata_contig5509.12982.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp
MYKAKTIRDKKGKIVGGAYMMKNRAGDQAITAETGRVAPDRRWFGNTRVI
KQEELDKFREEMTTRSTDPYNVILRRKKLPMGLLQE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012971NOG2_N_dom
IPR024929NOG2