prot_H-paniculata_contig546.12917.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig546.12917.1
Unique Nameprot_H-paniculata_contig546.12917.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length249
Homology
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BLAST of mRNA_H-paniculata_contig546.12917.1 vs. uniprot
Match: A0A6H5K800_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K800_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 1.060e-76
Identity = 120/170 (70.59%), Postives = 133/170 (78.24%), Query Frame = 0 
Query:   73 ELHPNWQSLERRLQSRVPRPRGEGVPEGRRNLKPSEEDFWHEAGVYEYGPSPKPPSSSSTILTGEATCARLSTVEVETANLPLVIQLYKTSISPVLQVKGFCGAQVFSDRAAGRVHSLTLWESWGALEQAVADPRYKKAMSKLAKMIEGPPSVCDTEVACCILPTTGGGD 242
            ELHPNW  LERRLQSRVPR +G GVPEGR NLKPSEEDFWH+AGVY+Y  +    SSS  I T E  CARLSTV+V   N+P V+ LYKTS++PVLQVKGFCGAQVFSDRAAG V SLTLW+SWG LE+ V + RY KAM  L  +IE PP V DTEVAC ILPTTGGGD
Sbjct:   34 ELHPNWSGLERRLQSRVPREKGHGVPEGRTNLKPSEEDFWHKAGVYDYSEAS---SSSPEIATREPACARLSTVKVSAENVPRVVALYKTSVAPVLQVKGFCGAQVFSDRAAGTVQSLTLWQSWGDLEEVVGNSRYAKAMRSLEGLIEAPPDVVDTEVACSILPTTGGGD 200
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig546.12917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K800_9PHAE1.060e-7670.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.100coord: 144..232
e-value: 9.1E-6
score: 27.8
IPR007138Antibiotic biosynthesis monooxygenase domainPFAMPF03992ABMcoord: 148..212
e-value: 4.2E-5
score: 23.6
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 154..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig546contigH-paniculata_contig546:2861..20842 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig546.12917.1mRNA_H-paniculata_contig546.12917.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig546 1455..20952 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig546.12917.1 ID=prot_H-paniculata_contig546.12917.1|Name=mRNA_H-paniculata_contig546.12917.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=249bp
MLQRVVRGVGKWGLIPYTPIASHSKIAFQQRQWTQQQLHLRYISRLQQLQ
GPAPRVRTTHTANGNEEEEDEDELHPNWQSLERRLQSRVPRPRGEGVPEG
RRNLKPSEEDFWHEAGVYEYGPSPKPPSSSSTILTGEATCARLSTVEVET
ANLPLVIQLYKTSISPVLQVKGFCGAQVFSDRAAGRVHSLTLWESWGALE
QAVADPRYKKAMSKLAKMIEGPPSVCDTEVACCILPTTGGGDKPGSTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007138ABM_dom
IPR011008Dimeric_a/b-barrel