prot_H-paniculata_contig54451.12902.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig54451.12902.1
Unique Nameprot_H-paniculata_contig54451.12902.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length49
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig54451.12902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.40coord: 1..49
e-value: 4.4E-7
score: 31.6
IPR023780Chromo domainPFAMPF00385Chromocoord: 1..40
e-value: 4.3E-6
score: 26.5
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 1..49
score: 10.386
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 1..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig54451contigH-paniculata_contig54451:170..316 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig54451.12902.1mRNA_H-paniculata_contig54451.12902.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig54451 170..316 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig54451.12902.1 ID=prot_H-paniculata_contig54451.12902.1|Name=mRNA_H-paniculata_contig54451.12902.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=49bp
YHIERIGEVKKAEHGDEYVVRVYWQGLDEEESTWELVSKVLADAPVVLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023780Chromo_domain
IPR000953Chromo/chromo_shadow_dom
IPR016197Chromo-like_dom_sf