prot_H-paniculata_contig53499.12767.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig53499.12767.1
Unique Nameprot_H-paniculata_contig53499.12767.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length109
Homology
BLAST of mRNA_H-paniculata_contig53499.12767.1 vs. uniprot
Match: A0A060SRL0_PYCCI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SRL0_PYCCI)

HSP 1 Score: 77.8 bits (190), Expect = 1.920e-14
Identity = 41/104 (39.42%), Postives = 63/104 (60.58%), Query Frame = 0
Query:    1 MKDLGFISRVLGIEVRHDGPNRTITILQGSYIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPKSLGAVLGNSTEYRGMVGSVMYASTVTRPDIAYAV 104
            + D G +  +LG  V  D PNR +++ Q +YI+ +++R+G ++ + V TP++    +S  +S   PS P  +GA+      YR  VGS+MYAS  TRPDI YAV
Sbjct:  883 ISDEGEVHWILGFAVERDRPNRRLSLSQTAYIKSIVRRFGLEDAKPVSTPMDPHAALSVAQS---PSTPAEIGAM--RDVPYREAVGSLMYASLGTRPDITYAV 981          
BLAST of mRNA_H-paniculata_contig53499.12767.1 vs. uniprot
Match: A0A060SJQ5_PYCCI (Uncharacterized protein (Fragment) n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SJQ5_PYCCI)

HSP 1 Score: 77.4 bits (189), Expect = 2.650e-14
Identity = 43/104 (41.35%), Postives = 62/104 (59.62%), Query Frame = 0
Query:    1 MKDLGFISRVLGIEVRHDGPNRTITILQGSYIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPKSLGAVLGNSTEYRGMVGSVMYASTVTRPDIAYAV 104
            + D G I  +LG  V  D  NR +++ Q +YI  +++R+G ++ + V TP++  V +S   SA  PS P  +GA+      YR  VGS+MYAS  TRPDI YAV
Sbjct: 1242 ISDEGEIHWILGFAVERDRDNRRLSLSQTAYIESIVRRFGLEDAKPVSTPMDPHVALS---SAQSPSTPADIGAM--RDVPYREAVGSLMYASLGTRPDITYAV 1340          
BLAST of mRNA_H-paniculata_contig53499.12767.1 vs. uniprot
Match: A0A537J1B9_9BACT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A537J1B9_9BACT)

HSP 1 Score: 75.1 bits (183), Expect = 9.990e-14
Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 0
Query:    1 MKDLGFISRVLGIEVRHDGPNRTITILQGSYIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPKSLGAVLGNSTEYRGMVGSVMYASTVTRPDIAYAVHQ 106
            MKD+G   + LG+E+ + G N +I I Q  YI+ +LKR+G  +C  V TP++  +K++    A+  ++PK          EY+ +VG +M+A+ VTRPDI  AV Q
Sbjct:   44 MKDMGVARKFLGMEIEY-GDNGSIKIHQEQYIQGLLKRHGMRDCNPVTTPLDTSIKLTKTTDAEATADPK----------EYQSIVGGLMFAAIVTRPDIMCAVGQ 138          
BLAST of mRNA_H-paniculata_contig53499.12767.1 vs. uniprot
Match: A0A1M2W662_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2W662_TRAPU)

HSP 1 Score: 75.5 bits (184), Expect = 1.070e-13
Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = 0
Query:    1 MKDLGFISRVLGIEVRHDGPNRTITILQGSYIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPKSLGAVLGNSTEYRGMVGSVMYASTVTRPDIAYAV 104
            + D G I  +LG  V  D  NR +++ Q +YI  +++R+G ++ + V TP++  + ++   SA  PS P  +GA+      YR  VGS+MYAS  TRPDI YAV
Sbjct:  137 ISDKGEIHFILGFAVLRDRSNRRLSLSQTAYIESIVRRFGLEDAKPVSTPMDPHIALT---SAQSPSTPAEIGAM--RDVPYREAVGSLMYASLGTRPDITYAV 235          
BLAST of mRNA_H-paniculata_contig53499.12767.1 vs. uniprot
Match: UPI0010360700 (uncharacterized protein LOC114282272 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010360700)

HSP 1 Score: 75.1 bits (183), Expect = 1.090e-13
Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    1 MKDLGFISRVLGIEVRHDGPNRTITILQGSYIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPKSLGAVLGNSTEYRGMVGSVMYASTVTRPDIAYAVH 105
            MKDLG ++  LG+EV HD     ++  Q  Y  D+L R G  +C+   TPV+ +++++  +           GA+L ++T YR +VGS++Y  TVTRPDIAYAVH
Sbjct:  112 MKDLGTLNYFLGLEVSHDSTGSYLS--QAKYASDLLARAGLTDCKTTSTPVDPQIRLTPLD-----------GALLNDATLYRQLVGSLVYL-TVTRPDIAYAVH 202          
BLAST of mRNA_H-paniculata_contig53499.12767.1 vs. uniprot
Match: A0A1M2V5L4_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V5L4_TRAPU)

HSP 1 Score: 75.5 bits (184), Expect = 1.210e-13
Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = 0
Query:    1 MKDLGFISRVLGIEVRHDGPNRTITILQGSYIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPKSLGAVLGNSTEYRGMVGSVMYASTVTRPDIAYAV 104
            + D G I  +LG  V  D  NR +++ Q +YI  +++R+G ++ + V TP++  + ++   SA  PS P  +GA+      YR  VGS+MYAS  TRPDI YAV
Sbjct:  137 ISDKGEIHFILGFAVLRDRSNRRLSLSQTAYIESIVRRFGLEDAKPVSTPMDPHIALT---SAQSPSTPAEIGAM--RDVPYREAVGSLMYASLGTRPDITYAV 235          
BLAST of mRNA_H-paniculata_contig53499.12767.1 vs. uniprot
Match: A0A1M2VT27_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VT27_TRAPU)

HSP 1 Score: 75.1 bits (183), Expect = 1.500e-13
Identity = 40/104 (38.46%), Postives = 63/104 (60.58%), Query Frame = 0
Query:    1 MKDLGFISRVLGIEVRHDGPNRTITILQGSYIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPKSLGAVLGNSTEYRGMVGSVMYASTVTRPDIAYAV 104
            + D G I  +LG  V  D  NR +++ Q +YI+ +++R+G ++ + + TP++  V ++  +S   PS P  +GA+      YR  VGS+MYAS  TRPDI YAV
Sbjct:  152 ISDEGEIHWILGFAVERDRANRRLSLSQTAYIKSIVRRFGLEDAKPISTPMDPHVALTVAQS---PSTPAEIGAM--RDVPYREAVGSLMYASLGTRPDITYAV 250          
BLAST of mRNA_H-paniculata_contig53499.12767.1 vs. uniprot
Match: F2UIQ1_SALR5 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UIQ1_SALR5)

HSP 1 Score: 71.2 bits (173), Expect = 2.180e-13
Identity = 43/105 (40.95%), Postives = 61/105 (58.10%), Query Frame = 0
Query:    1 MKDLGFISRVLGIEVRHDGPNRTITILQGSYIRDVLKRYGFDECRGVPTPV-EGKVKISAPESADKPSEPKSLGAVLGNSTEYRGMVGSVMYASTVTRPDIAYAV 104
            MKDLG     LGI+VRHD   RT+T+ Q  Y+R VL+ +G  +C+ V TP+  G V   A +    P  P            +R ++GS++YA+T+TRPDI+ AV
Sbjct:   14 MKDLGSPDICLGIKVRHDRKARTVTMSQEHYLRSVLETFGMADCKPVGTPLCTGYVDKPADKEEPLPDVP------------FRELLGSLLYAATMTRPDISAAV 106          
BLAST of mRNA_H-paniculata_contig53499.12767.1 vs. uniprot
Match: UPI001F07F85A (dynein regulatory complex subunit 3 n=1 Tax=Drosophila willistoni TaxID=7260 RepID=UPI001F07F85A)

HSP 1 Score: 74.3 bits (181), Expect = 3.020e-13
Identity = 40/109 (36.70%), Postives = 64/109 (58.72%), Query Frame = 0
Query:    1 MKDLGFISRVLGIEVRHDGPNRTITILQGSYIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPKSLGAVLGNSTEYRGMVGSVMYASTVTRPDIAYAVHQAAR 109
            MKD+G +S +LG+ VRH+    TI I Q +YI  +LKR+G D+C+ V TPV+    +SA       ++ + +  V      Y   +G ++YA+  TRPD ++AV+  +R
Sbjct:  179 MKDMGEVSSILGMRVRHNKTEGTIKIDQSNYIAGILKRFGMDDCKAVSTPVDVAQSLSADMGHQSEADIEDMKKV-----PYLEAIGCLLYAAQNTRPDKSFAVNMLSR 282          
BLAST of mRNA_H-paniculata_contig53499.12767.1 vs. uniprot
Match: A0A0C3PIV1_PISTI (Uncharacterized protein (Fragment) n=1 Tax=Pisolithus tinctorius Marx 270 TaxID=870435 RepID=A0A0C3PIV1_PISTI)

HSP 1 Score: 74.3 bits (181), Expect = 3.180e-13
Identity = 41/102 (40.20%), Postives = 62/102 (60.78%), Query Frame = 0
Query:    3 DLGFISRVLGIEVRHDGPNRTITILQGSYIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPKSLGAVLGNSTEYRGMVGSVMYASTVTRPDIAYAV 104
            DLG +  +LGIEV  +  +R I++ Q  YI  +++R+GFDE + V  P+E   K+ + +S    +E  ++  +      YR  VGS+MYAS  TRPDI+YAV
Sbjct: 1036 DLGELHWLLGIEVTRNRDDRAISLCQRPYIESIIRRFGFDELKPVSNPMEPSTKLHSGQSPSTGAEFAAMKHI-----PYREAVGSLMYASLSTRPDISYAV 1132          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig53499.12767.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A060SRL0_PYCCI1.920e-1439.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060SJQ5_PYCCI2.650e-1441.35Uncharacterized protein (Fragment) n=1 Tax=Pycnopo... [more]
A0A537J1B9_9BACT9.990e-1438.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1M2W662_TRAPU1.070e-1339.42Retrovirus-related Pol polyprotein from transposon... [more]
UPI00103607001.090e-1340.95uncharacterized protein LOC114282272 n=1 Tax=Camel... [more]
A0A1M2V5L4_TRAPU1.210e-1339.42Retrovirus-related Pol polyprotein from transposon... [more]
A0A1M2VT27_TRAPU1.500e-1338.46Retrovirus-related Pol polyprotein from transposon... [more]
F2UIQ1_SALR52.180e-1340.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001F07F85A3.020e-1336.70dynein regulatory complex subunit 3 n=1 Tax=Drosop... [more]
A0A0C3PIV1_PISTI3.180e-1340.20Uncharacterized protein (Fragment) n=1 Tax=Pisolit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig53499contigH-paniculata_contig53499:295..666 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig53499.12767.1mRNA_H-paniculata_contig53499.12767.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig53499 295..990 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig53499.12767.1 ID=prot_H-paniculata_contig53499.12767.1|Name=mRNA_H-paniculata_contig53499.12767.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp
MKDLGFISRVLGIEVRHDGPNRTITILQGSYIRDVLKRYGFDECRGVPTP
VEGKVKISAPESADKPSEPKSLGAVLGNSTEYRGMVGSVMYASTVTRPDI
AYAVHQAAR
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