prot_H-paniculata_contig53198.12724.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig53198.12724.1
Unique Nameprot_H-paniculata_contig53198.12724.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length51
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig53198.12724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..51
e-value: 4.1E-9
score: 38.3
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 1..50
e-value: 1.0E-7
score: 32.0
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 1..51
score: 10.229
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 2..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig53198contigH-paniculata_contig53198:759..911 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig53198.12724.1mRNA_H-paniculata_contig53198.12724.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig53198 759..911 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig53198.12724.1 ID=prot_H-paniculata_contig53198.12724.1|Name=mRNA_H-paniculata_contig53198.12724.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=51bp
SCAVCDEDFTTMVRAHKCRLCRLAVCISCSTARVFVAGFAERQRACHKCV
R
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR000306Znf_FYVE
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD