prot_H-paniculata_contig53127.12720.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig53127.12720.1
Unique Nameprot_H-paniculata_contig53127.12720.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length130
Homology
BLAST of mRNA_H-paniculata_contig53127.12720.1 vs. uniprot
Match: A0A6H5KAF3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAF3_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 5.530e-7
Identity = 26/107 (24.30%), Postives = 57/107 (53.27%), Query Frame = 0
Query:   23 MVIDGSPSGAWSIFEDWFRDTASGERTKIRKEFENLAVRPSETPNEFLARSFAIVERMKEIGVDMTETEIHHQVLRSLPDRFAIARHIMLMNKNLTRKDLEEAVRTA 129
            ++ DGSPSG W IF +++   A  E+ ++  ++  L ++  ETP ++  R   +  R+   GV  ++ + +  ++  L D + + + + +     +R+ +E+ VR A
Sbjct:   94 IIADGSPSGGWKIFLNYYEPRARAEKERLSSQYHGLEMKVGETPQDYFGRFAVLRSRLAPHGVIFSDEDANAHMVYHLSDEYMMEKILTMSPIPRSREKIEKGVRDA 200          
BLAST of mRNA_H-paniculata_contig53127.12720.1 vs. uniprot
Match: UPI00063AB69A (uncharacterized protein LOC105767199 n=1 Tax=Gossypium raimondii TaxID=29730 RepID=UPI00063AB69A)

HSP 1 Score: 53.9 bits (128), Expect = 6.190e-6
Identity = 34/107 (31.78%), Postives = 57/107 (53.27%), Query Frame = 0
Query:    1 KAHQAFQALIKSVEKCVQLQCAMVIDGSPSGAWSIFEDWFRDTASGERTKI---RKEFENLAVRPSETPNEFLARSFAIVERMKEIGVDMTETEIHHQVLRSLPDRF 104
            K H+A   L   V   +  +  M  D SP  AW   ++ F  T    + ++   R++FENL +R SET  ++  R  AIV  ++ +GVD TE+ +  +V+ +L ++F
Sbjct:   63 KKHKAMACLQNGVSDVIFTRI-MACD-SPKQAWEKLKEEFMGTDKTRQQQVMNLRRDFENLRMRESETIKQYSDRIMAIVNSIRLLGVDFTESRVVEKVITTLSEKF 167          
BLAST of mRNA_H-paniculata_contig53127.12720.1 vs. uniprot
Match: A0A8J5Z314_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Z314_9ROSI)

HSP 1 Score: 53.5 bits (127), Expect = 1.190e-5
Identity = 30/102 (29.41%), Postives = 55/102 (53.92%), Query Frame = 0
Query:   28 SPSGAWSIFEDWF---RDTASGERTKIRKEFENLAVRPSETPNEFLARSFAIVERMKEIGVDMTETEIHHQVLRSLPDRFAIARHIMLMNKNLTRKDLEEAV 126
            SP  AW   ++ F     T   +   +R++F+NL +R SET  ++L R  A V  ++ IG D +++ +  +V+ +LPD+F      +  ++NL+   L E +
Sbjct:    5 SPKQAWEKMKEEFIGSDKTRKQQLINLRRDFDNLKMRESETIKQYLDRIMATVNNIRLIGEDFSDSRVVEKVINTLPDKFESKISSLEDSRNLSAISLSELI 106          
BLAST of mRNA_H-paniculata_contig53127.12720.1 vs. uniprot
Match: A0A8J5YPG1_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YPG1_9ROSI)

HSP 1 Score: 52.4 bits (124), Expect = 2.840e-5
Identity = 37/134 (27.61%), Postives = 68/134 (50.75%), Query Frame = 0
Query:    1 KAHQAFQALIKSVEKCVQ--LQCAMVIDGSPSGAWSIFEDWFRDTASGERTK------IRKEFENLAVRPSETPNEFLARSFAIVERMKEIGVDMTETEIHHQVLRSLPDRFAIARHIMLMNKNLTRKDLEEAV 126
            K H+A    I  ++ CV   +   ++   +P  AW   ++ F+ T   ERT+      +R++FENL ++  ET  ++  R  A+V  ++ +G   +ET I  +VL +LP+R+      +  ++NL    L E +
Sbjct:   66 KRHKA----ISCIQNCVSDVIFTRIMACKTPKQAWDKLKEEFQGT---ERTRQQQLLNLRRDFENLKMKEEETVKQYSDRIMAVVNSIRLLGEQFSETRIVEKVLSTLPERYEAKISSLEDSRNLATISLTELI 192          
BLAST of mRNA_H-paniculata_contig53127.12720.1 vs. uniprot
Match: UPI00063AAFCD (uncharacterized protein LOC105793081 n=1 Tax=Gossypium raimondii TaxID=29730 RepID=UPI00063AAFCD)

HSP 1 Score: 52.0 bits (123), Expect = 2.960e-5
Identity = 32/102 (31.37%), Postives = 53/102 (51.96%), Query Frame = 0
Query:    1 KAHQAFQALIKSVEKCVQLQCAMVIDGSPSGAWSIFEDWFRDTASGERTKI---RKEFENLAVRPSETPNEFLARSFAIVERMKEIGVDMTETEIHHQVLRS 99
            K H+A   L   V   +   C M  D SP  AW   ++ F  T    + ++   R++FENL ++ SET  ++  R  AIV  ++ +GVD TE+ +  + +R+
Sbjct:   63 KKHKAIAYLQNGVSDVI-FTCIMACD-SPKQAWEKLKEEFMGTDKTRQQQVINLRRDFENLRMKESETTKQYSDRIMAIVNSIRFLGVDFTESRVVEKQMRA 162          
BLAST of mRNA_H-paniculata_contig53127.12720.1 vs. uniprot
Match: A0A6P4P4U3_GOSAR (uncharacterized protein LOC108474055 n=1 Tax=Gossypium arboreum TaxID=29729 RepID=A0A6P4P4U3_GOSAR)

HSP 1 Score: 50.8 bits (120), Expect = 5.490e-5
Identity = 35/131 (26.72%), Postives = 66/131 (50.38%), Query Frame = 0
Query:    1 KAHQAFQALIKSVEKCVQLQCAMVIDGSPSGAWSIFEDWFRD---TASGERTKIRKEFENLAVRPSETPNEFLARSFAIVERMKEIGVDMTETEIHHQVLRSLPDRFAIARHIMLMNKNLTRKDLEEAVRT 128
            K H+    L   V   +  +  M  D SP  AW   ++ F     T   +   +R++FENL +R SET  ++  R  AIV  ++ IG + +E+ +  +V+ +LP++F      +  +++L+   L E +++
Sbjct:   63 KKHKVMACLQNGVSDVIFTR-VMACD-SPKQAWEKLKEEFMGSDKTRQQQLINLRRDFENLKMRESETIKQYSDRIMAIVNNIRLIGDNFSESRVVEKVITTLPEKFESKISSLEDSRDLSAISLSELIKS 191          
BLAST of mRNA_H-paniculata_contig53127.12720.1 vs. uniprot
Match: UPI000B7801F3 (uncharacterized protein LOC110636393 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B7801F3)

HSP 1 Score: 50.4 bits (119), Expect = 9.960e-5
Identity = 29/98 (29.59%), Postives = 55/98 (56.12%), Query Frame = 0
Query:   32 AWSIFEDWFRDTASGERTKI---RKEFENLAVRPSETPNEFLARSFAIVERMKEIGVDMTETEIHHQVLRSLPDRFAIARHIMLMNKNLTRKDLEEAV 126
            AW   ++ F  + S ++  +   R+EFE L ++ SET  E+  R  ++V +++ +G D+ +  +  +VL SLPDRF      +  +K+L++  L E +
Sbjct:   95 AWDRLKEEFHGSESSKQMSVLNLRREFEVLKMKESETLKEYTDRLMSVVNKIRLLGEDLPDKRVVEKVLVSLPDRFEPKISSLEDSKDLSKITLPELI 192          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig53127.12720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KAF3_9PHAE5.530e-724.30Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
UPI00063AB69A6.190e-631.78uncharacterized protein LOC105767199 n=1 Tax=Gossy... [more]
A0A8J5Z314_9ROSI1.190e-529.41Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5YPG1_9ROSI2.840e-527.61Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]
UPI00063AAFCD2.960e-531.37uncharacterized protein LOC105793081 n=1 Tax=Gossy... [more]
A0A6P4P4U3_GOSAR5.490e-526.72uncharacterized protein LOC108474055 n=1 Tax=Gossy... [more]
UPI000B7801F39.960e-529.59uncharacterized protein LOC110636393 n=1 Tax=Hevea... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 119..130
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 4..125
e-value: 5.3E-12
score: 45.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig53127contigH-paniculata_contig53127:185..574 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig53127.12720.1mRNA_H-paniculata_contig53127.12720.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig53127 185..574 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig53127.12720.1 ID=prot_H-paniculata_contig53127.12720.1|Name=mRNA_H-paniculata_contig53127.12720.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=130bp
KAHQAFQALIKSVEKCVQLQCAMVIDGSPSGAWSIFEDWFRDTASGERTK
IRKEFENLAVRPSETPNEFLARSFAIVERMKEIGVDMTETEIHHQVLRSL
PDRFAIARHIMLMNKNLTRKDLEEAVRTAK
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