prot_H-paniculata_contig5310.12717.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5310.12717.1
Unique Nameprot_H-paniculata_contig5310.12717.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length66
Homology
BLAST of mRNA_H-paniculata_contig5310.12717.1 vs. uniprot
Match: D7G8A0_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A0_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 2.180e-24
Identity = 50/63 (79.37%), Postives = 53/63 (84.13%), Query Frame = 0
Query:    1 MASHSWLLKDPAMLSRAVARVFHGIGSVCFPAAKWRDSTFWARYREYSFGEVKSKLEQAFYAR 63
            MA HSWLLKD  ML+RAVARVFHGIGSV FPA KWR+S FWARYR +SF EVKSKLE AF AR
Sbjct: 2136 MAPHSWLLKDVPMLARAVARVFHGIGSVSFPATKWRESAFWARYRHHSFREVKSKLEIAFGAR 2198          
BLAST of mRNA_H-paniculata_contig5310.12717.1 vs. uniprot
Match: A0A835Z8Q0_9STRA (DNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q0_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.410e-12
Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    2 ASHSWLLKDPAMLSRAVARVFHGIGSVCFPAAKWRDSTFWARYREYSFGEVKSKL 56
            A H+WL+++    + A AR+ HG+GS   PAA+WR STFW RYREY+F +V + L
Sbjct:  811 APHAWLMRERDAAAAAAARIMHGLGSAALPAARWRASTFWGRYREYAFEDVIAAL 865          
BLAST of mRNA_H-paniculata_contig5310.12717.1 vs. uniprot
Match: A0A553QBR7_9TELE (Uncharacterized protein n=2 Tax=Danionella translucida TaxID=623744 RepID=A0A553QBR7_9TELE)

HSP 1 Score: 53.1 bits (126), Expect = 1.680e-6
Identity = 24/44 (54.55%), Postives = 29/44 (65.91%), Query Frame = 0
Query:   10 DPAMLSRAVARVFHGIGSVCFPAAKW-RDSTFWARYREYSFGEV 52
            D     RAVARVFHGIGS CFPA  + RD  FW +Y ++ F E+
Sbjct: 1486 DEKFSGRAVARVFHGIGSPCFPAQTYGRDRRFWRKYLQFDFNEI 1529          
BLAST of mRNA_H-paniculata_contig5310.12717.1 vs. uniprot
Match: A0A8C9TIA1_SCLFO (DNA helicase n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9TIA1_SCLFO)

HSP 1 Score: 51.6 bits (122), Expect = 5.810e-6
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 0
Query:   10 DPAMLSRAVARVFHGIGSVCFPAAKW-RDSTFWARYREYSFGEV 52
            D     RAVAR+FHGIGS C+PA  + RD  FW RY ++ F E+
Sbjct:  748 DEKFSGRAVARIFHGIGSPCYPAQVFGRDRRFWRRYIQFDFNEI 791          
BLAST of mRNA_H-paniculata_contig5310.12717.1 vs. uniprot
Match: A0A0P7YUL3_SCLFO (ATP-dependent DNA helicase Q4-like n=5 Tax=Scleropages formosus TaxID=113540 RepID=A0A0P7YUL3_SCLFO)

HSP 1 Score: 51.6 bits (122), Expect = 5.870e-6
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 0
Query:   10 DPAMLSRAVARVFHGIGSVCFPAAKW-RDSTFWARYREYSFGEV 52
            D     RAVAR+FHGIGS C+PA  + RD  FW RY ++ F E+
Sbjct: 1399 DEKFSGRAVARIFHGIGSPCYPAQVFGRDRRFWRRYIQFDFNEI 1442          
BLAST of mRNA_H-paniculata_contig5310.12717.1 vs. uniprot
Match: A0A3B3Q9D6_9TELE (RecQ like helicase 4 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3Q9D6_9TELE)

HSP 1 Score: 51.2 bits (121), Expect = 8.040e-6
Identity = 25/53 (47.17%), Postives = 32/53 (60.38%), Query Frame = 0
Query:    1 MASHSWLLKDPAMLSRAVARVFHGIGSVCFPAAKW-RDSTFWARYREYSFGEV 52
            + SHS    D     RAVAR+FHGIGS CFPA  + RD  +W +Y  + F E+
Sbjct: 1449 LTSHS----DEKFSGRAVARIFHGIGSPCFPAQTFGRDRRYWRKYIRFDFNEI 1497          
BLAST of mRNA_H-paniculata_contig5310.12717.1 vs. uniprot
Match: A0A8D0HR98_SPHPU (RecQ like helicase 4 n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0HR98_SPHPU)

HSP 1 Score: 50.8 bits (120), Expect = 1.090e-5
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    9 KDPAMLSRAVARVFHGIGSVCFPAAKW-RDSTFWARYREYSFGEV 52
            +D    SRAVARVFHGIGS C+PA  + RD  FW +Y ++ F ++
Sbjct:  760 QDEKFSSRAVARVFHGIGSPCYPAQVYGRDRRFWRKYIQFDFNKL 804          
BLAST of mRNA_H-paniculata_contig5310.12717.1 vs. uniprot
Match: A0A8D0HLI8_SPHPU (RecQ like helicase 4 n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0HLI8_SPHPU)

HSP 1 Score: 50.8 bits (120), Expect = 1.090e-5
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    9 KDPAMLSRAVARVFHGIGSVCFPAAKW-RDSTFWARYREYSFGEV 52
            +D    SRAVARVFHGIGS C+PA  + RD  FW +Y ++ F ++
Sbjct:  763 QDEKFSSRAVARVFHGIGSPCYPAQVYGRDRRFWRKYIQFDFNKL 807          
BLAST of mRNA_H-paniculata_contig5310.12717.1 vs. uniprot
Match: E7F8R0_DANRE (RecQ helicase-like 4 n=3 Tax=Danio rerio TaxID=7955 RepID=E7F8R0_DANRE)

HSP 1 Score: 50.8 bits (120), Expect = 1.100e-5
Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 0
Query:   10 DPAMLSRAVARVFHGIGSVCFPAAKW-RDSTFWARYREYSFGEV 52
            D     RAVAR+FHGIGS C+PA  + RD  FW +Y ++ F E+
Sbjct: 1404 DEKFSGRAVARIFHGIGSPCYPAQVYGRDRRFWRKYIQFDFNEI 1447          
BLAST of mRNA_H-paniculata_contig5310.12717.1 vs. uniprot
Match: A0A5N5KK60_PANHP (Uncharacterized protein n=2 Tax=Pangasianodon hypophthalmus TaxID=310915 RepID=A0A5N5KK60_PANHP)

HSP 1 Score: 50.4 bits (119), Expect = 1.500e-5
Identity = 21/44 (47.73%), Postives = 29/44 (65.91%), Query Frame = 0
Query:   10 DPAMLSRAVARVFHGIGSVCFPAAKW-RDSTFWARYREYSFGEV 52
            D     RAVAR+FHGIGS C+PA  + RD  +W +Y ++ F E+
Sbjct: 1391 DEKFSGRAVARIFHGIGSPCYPAQTYGRDRRYWRKYLQFDFNEI 1434          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5310.12717.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8A0_ECTSI2.180e-2479.37DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A835Z8Q0_9STRA2.410e-1250.91DNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A553QBR7_9TELE1.680e-654.55Uncharacterized protein n=2 Tax=Danionella translu... [more]
A0A8C9TIA1_SCLFO5.810e-652.27DNA helicase n=2 Tax=Scleropages formosus TaxID=11... [more]
A0A0P7YUL3_SCLFO5.870e-652.27ATP-dependent DNA helicase Q4-like n=5 Tax=Sclerop... [more]
A0A3B3Q9D6_9TELE8.040e-647.17RecQ like helicase 4 n=2 Tax=Paramormyrops kingsle... [more]
A0A8D0HR98_SPHPU1.090e-551.11RecQ like helicase 4 n=1 Tax=Sphenodon punctatus T... [more]
A0A8D0HLI8_SPHPU1.090e-551.11RecQ like helicase 4 n=1 Tax=Sphenodon punctatus T... [more]
E7F8R0_DANRE1.100e-550.00RecQ helicase-like 4 n=3 Tax=Danio rerio TaxID=795... [more]
A0A5N5KK60_PANHP1.500e-547.73Uncharacterized protein n=2 Tax=Pangasianodon hypo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5310contigH-paniculata_contig5310:4999..6396 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5310.12717.1mRNA_H-paniculata_contig5310.12717.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5310 4545..6402 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5310.12717.1 ID=prot_H-paniculata_contig5310.12717.1|Name=mRNA_H-paniculata_contig5310.12717.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp
MASHSWLLKDPAMLSRAVARVFHGIGSVCFPAAKWRDSTFWARYREYSFG
EVKSKLEQAFYARSR*
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