prot_H-paniculata_contig52986.12687.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig52986.12687.1
Unique Nameprot_H-paniculata_contig52986.12687.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length130
Homology
BLAST of mRNA_H-paniculata_contig52986.12687.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.780e-17
Identity = 39/94 (41.49%), Postives = 54/94 (57.45%), Query Frame = 0
Query:   38 CRAGDAFTVTSTSSTPCKSVLIGDGFCDPINNNPSCDYDNGDCCECDCISTLN---KCGINGYLCANPSSGCADPILEYVNCTGDLVDAGNGNC 128
            C   D    ++T    C+    GD +CD INNNPSCDYD GDCCEC C S+ +    CG NG+ C + +      + E+ +CTGD +  G+G+C
Sbjct:   44 CLYSDCDPASTTEVATCEESWKGDSWCDEINNNPSCDYDGGDCCECSCASSSSAEYSCGENGFNCRDTTCLDLSLVAEFPDCTGDYLTVGDGSC 137          
BLAST of mRNA_H-paniculata_contig52986.12687.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 2.440e-13
Identity = 30/65 (46.15%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   44 FTVTSTSSTPCKSVLIGDGFCDPINNNPSCDYDNGDCCECDCISTLNKCGINGYLCANPSSGCAD 108
            + V +  ST C S   GDG+CD   N+  C++D GDCCECDC+     CG+ GY C +P+S C+D
Sbjct:  400 YDVYNYGSTACISSYTGDGWCDSFYNHADCEWDGGDCCECDCVDATYDCGVVGYDCLDPTSSCSD 464          
BLAST of mRNA_H-paniculata_contig52986.12687.1 vs. uniprot
Match: D7FSN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN8_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 2.450e-10
Identity = 26/50 (52.00%), Postives = 31/50 (62.00%), Query Frame = 0
Query:   55 KSVLIGDGFCDPINNNPSCDYDNGDCCECDCISTLNKCGINGYLCANPSS 104
             S  I DG+CD   N   CD+D GDCCECDC+  L  CG+  Y C NPS+
Sbjct:   62 SSSYISDGWCDSYYNTEECDWDGGDCCECDCVDALYTCGVADYDCLNPSA 111          
BLAST of mRNA_H-paniculata_contig52986.12687.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 3.390e-10
Identity = 34/79 (43.04%), Postives = 43/79 (54.43%), Query Frame = 0
Query:   54 CKSVLIGDGFCDPINNNPSCDYDNGDCCECDCISTLNK-CGINGYLCANPSSG-CADPILEYVNCTGDLVDAGNGNCDS 130
            C      DGFCD +NN+PSCDYD GDCCEC CI   +  CG  G+ C +P  G   +   E   C    ++  +G CDS
Sbjct:   87 CHEDWAKDGFCDLVNNHPSCDYDGGDCCECSCIDGPDYGCGSIGFACLDPDCGNTTETAPENTTCEESWMN--DGYCDS 163          
BLAST of mRNA_H-paniculata_contig52986.12687.1 vs. uniprot
Match: A0A6H5JX54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX54_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 2.220e-9
Identity = 30/47 (63.83%), Postives = 33/47 (70.21%), Query Frame = 0
Query:   59 IGDGFCDPINNNPSCDYDNGDCCECDCISTLNK-CGINGYLCANPSS 104
            IG+G C   NN   C YD GDCCECDC STL   CG+NGY CA+PSS
Sbjct:  223 IGNGACYWGNNFEECGYDGGDCCECDCESTLESHCGVNGYDCADPSS 269          
BLAST of mRNA_H-paniculata_contig52986.12687.1 vs. uniprot
Match: A0A2E8S136_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E8S136_9DELT)

HSP 1 Score: 63.5 bits (153), Expect = 3.920e-9
Identity = 28/69 (40.58%), Postives = 37/69 (53.62%), Query Frame = 0
Query:   57 VLIGDGFCDPINNNPSCDYDNGDCCECDCISTLNKCGINGYLCANPSS---------------GCADPI 110
            + +GDG+CD  NNN +C +D GDCCE  C+S    CG N Y C +P+S               GC DP+
Sbjct:  273 MWVGDGWCDDSNNNATCSWDGGDCCESACVSASYTCGANNYDCLDPNSCENTEAGCGCLLDNGGCGDPM 341          
BLAST of mRNA_H-paniculata_contig52986.12687.1 vs. uniprot
Match: D7FX77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX77_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 1.330e-8
Identity = 26/50 (52.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:   59 IGDGFCDPINNNPSCDYDNGDCCECDCIS--TLNKCGINGYLCANPSSGC 106
            + DG CD  NNN +CDYD GDCCECDC     + +CG+ GY C + +S C
Sbjct:  369 VSDGKCDSGNNNAACDYDGGDCCECDCYDYGEVYECGVVGYYCLDQTSLC 418          
BLAST of mRNA_H-paniculata_contig52986.12687.1 vs. uniprot
Match: A0A6H5J6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K0_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 6.260e-8
Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 0
Query:   47 TSTSSTPCKSVL--IGDGFCDPINNNPSCDYDNGDCCECDCIS--TLNKCGINGYLCANPSSGC 106
            TS+  + C   +  + DG CD  NNN +CDYD GDCCECDC       +CG  GY C + +S C
Sbjct:  350 TSSDDSGCFDGVWAVSDGKCDSGNNNAACDYDGGDCCECDCYDYGEAYECGAFGYYCLDQTSIC 413          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig52986.12687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5K7Z1_9PHAE1.780e-1741.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVP4_9PHAE2.440e-1346.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSN8_ECTSI2.450e-1052.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5Y7_ECTSI3.390e-1043.04Polymorphic Outer membrane protein G/I family n=1 ... [more]
A0A6H5JX54_9PHAE2.220e-963.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2E8S136_9DELT3.920e-940.58Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]
D7FX77_ECTSI1.330e-852.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J6K0_9PHAE6.260e-845.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainSMARTSM00004NL_2coord: 40..81
e-value: 3.4E-4
score: 28.8
IPR000800Notch domainPFAMPF00066Notchcoord: 52..80
e-value: 2.2E-5
score: 24.8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..130
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig52986contigH-paniculata_contig52986:809..1198 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig52986.12687.1mRNA_H-paniculata_contig52986.12687.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig52986 809..1198 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig52986.12687.1 ID=prot_H-paniculata_contig52986.12687.1|Name=mRNA_H-paniculata_contig52986.12687.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=130bp
MSSILQETRTSRIVAPFGQGTGMAGCGFVYIFLLFSFCRAGDAFTVTSTS
STPCKSVLIGDGFCDPINNNPSCDYDNGDCCECDCISTLNKCGINGYLCA
NPSSGCADPILEYVNCTGDLVDAGNGNCDS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom