prot_H-paniculata_contig529.12673.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig529.12673.1
Unique Nameprot_H-paniculata_contig529.12673.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length59
Homology
BLAST of mRNA_H-paniculata_contig529.12673.1 vs. uniprot
Match: D7G8H6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8H6_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 8.780e-21
Identity = 44/58 (75.86%), Postives = 54/58 (93.10%), Query Frame = 0
Query:    1 ELPPIWVPIVVVGVLSVGIGLLQRSLGDVIDDEAKLGSISGARAAKQSARDRNMFKKK 58
            +LPP+WVP+ V  VL++GIGLLQ SLGDV++DEAKLG++SGARAAKQSARDR+MFKKK
Sbjct:  110 DLPPMWVPLAVGFVLTLGIGLLQGSLGDVMNDEAKLGALSGARAAKQSARDRDMFKKK 167          
BLAST of mRNA_H-paniculata_contig529.12673.1 vs. uniprot
Match: A0A836CD09_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD09_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.800e-18
Identity = 40/58 (68.97%), Postives = 49/58 (84.48%), Query Frame = 0
Query:    1 ELPPIWVPIVVVGVLSVGIGLLQRSLGDVIDDEAKLGSISGARAAKQSARDRNMFKKK 58
            ELPP+WVP+V+  V+  GIG  Q SLG+V+DDEAKLG +SGARAAKQSAR R+MFK+K
Sbjct:   49 ELPPMWVPLVLGAVVLAGIGAQQLSLGNVMDDEAKLGGLSGARAAKQSARGRSMFKRK 106          
BLAST of mRNA_H-paniculata_contig529.12673.1 vs. uniprot
Match: A0A7S3PV07_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PV07_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 6.910e-11
Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    1 ELPPIWVPIVVVGVLSVGIGLLQRSLGDVIDDEAKLGSISGARAAKQSARDRNMFKKK 58
            ELPP+WVPI+   V+  G+GLL  SLGDV+++EA LG +SGA+A K+  R R+ + KK
Sbjct:   79 ELPPVWVPILFAIVIIGGVGLLTFSLGDVMNEEASLGLMSGAKAKKEKERSRSSYFKK 136          
BLAST of mRNA_H-paniculata_contig529.12673.1 vs. uniprot
Match: A0A6U1Q394_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q394_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 7.990e-11
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    2 LPPIWVPIVVVGVLSVGIGLLQRSLGDVIDDEAKLGSISGARAAKQSARDRNMF 55
            LPP WVP+ V   L  G+GLLQ SLG+V DDEA LGS SGARA K+S R++   
Sbjct:   89 LPPFWVPVGVAIALLGGVGLLQLSLGNVADDEAMLGSASGARARKESTRNKKFL 142          
BLAST of mRNA_H-paniculata_contig529.12673.1 vs. uniprot
Match: A0A7S3Y243_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y243_HETAK)

HSP 1 Score: 63.9 bits (154), Expect = 1.920e-10
Identity = 32/55 (58.18%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    1 ELPPIWVPIVVVGVLSVGIGLLQRSLGDVIDDEAKLGSISGARAAKQSARDRNMF 55
            ELPP+WVP+    VL VGIG+LQ SLGDV++ EA LGS SGARA K++ R +   
Sbjct:  463 ELPPMWVPLATGAVLFVGIGVLQASLGDVMEAEAGLGSASGARARKENTRRKKFL 517          
BLAST of mRNA_H-paniculata_contig529.12673.1 vs. uniprot
Match: M2VSI4_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VSI4_GALSU)

HSP 1 Score: 49.7 bits (117), Expect = 2.110e-6
Identity = 23/50 (46.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:    6 WVPIVVVGVLSVGIGLLQRSLGDVIDDEAKLGSISGARAAKQSARDRNMF 55
            W+ +   G + +G+GLLQRSLGDVI DEA+L S S AR  +++ R +   
Sbjct:   23 WILVGATGAILIGVGLLQRSLGDVIRDEAQLPSASSARTKREANRSKRFL 72          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig529.12673.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G8H6_ECTSI8.780e-2175.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CD09_9STRA3.800e-1868.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3PV07_9STRA6.910e-1153.45Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A6U1Q394_9STRA7.990e-1159.26Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3Y243_HETAK1.920e-1058.18Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
M2VSI4_GALSU2.110e-646.00Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 23..58
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..22
NoneNo IPR availableTMHMMTMhelixcoord: 5..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig529contigH-paniculata_contig529:5242..5418 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig529.12673.1mRNA_H-paniculata_contig529.12673.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig529 5242..5418 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig529.12673.1 ID=prot_H-paniculata_contig529.12673.1|Name=mRNA_H-paniculata_contig529.12673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=59bp
ELPPIWVPIVVVGVLSVGIGLLQRSLGDVIDDEAKLGSISGARAAKQSAR
DRNMFKKK*
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