prot_H-paniculata_contig52751.12654.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig52751.12654.1
Unique Nameprot_H-paniculata_contig52751.12654.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length128
Homology
BLAST of mRNA_H-paniculata_contig52751.12654.1 vs. uniprot
Match: A0A6D2KD17_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KD17_9BRAS)

HSP 1 Score: 92.8 bits (229), Expect = 2.140e-19
Identity = 47/121 (38.84%), Postives = 74/121 (61.16%), Query Frame = 0
Query:   10 WTQVERSKSKLVVSTMMIYKRKIGEDGIMEKYKYRLVAHRNHQIKGIHFQEASSPAPAAASTKMVLTLAAIQDWELRHVDFEKTYLQAPIDQEIFVEIPVNY--GEFPGAVGRLDKAIYGL 128
            W  V  S ++ V+ T  IY+ K   DG+++KYK RLVA   +Q +G+ F+E  SP   + ST+MVL +A  ++W LR +D    +LQ  +D+E++V+ P  +   + P  V +L KA+YGL
Sbjct:  827 WDLVPPSPTQNVIDTKWIYRIKYFSDGLLDKYKSRLVARGFNQQEGVDFEETYSPVIKSTSTRMVLKIAVCKNWRLRQLDVNNAFLQGTLDEEVYVKQPPGFVDPDRPDYVCKLRKALYGL 947          
BLAST of mRNA_H-paniculata_contig52751.12654.1 vs. uniprot
Match: A0A6H5GI29_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GI29_9HEMI)

HSP 1 Score: 89.4 bits (220), Expect = 3.330e-18
Identity = 45/125 (36.00%), Postives = 72/125 (57.60%), Query Frame = 0
Query:    4 LIENGVWTQVERSKSKLVVSTMMIYKRKIGEDGIMEKYKYRLVAHRNHQIKGIHFQEASSPAPAAASTKMVLTLAAIQDWELRHVDFEKTYLQAPIDQEIFVEIPVNYGEFPGAVGRLDKAIYGL 128
            L++N  +  V+    K  +S   +YK K  E     +YK RLV     Q+ G+ FQE  SP    +S + ++++AA++DW++ H+D +  YL   +++EI+V  P N+ E  G V RL KA+YGL
Sbjct:  251 LVKNNTYEVVDLPPGKKTLSMKWVYKIKETEGD--RRYKARLVVRGCAQVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGL 373          
BLAST of mRNA_H-paniculata_contig52751.12654.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI)

HSP 1 Score: 89.4 bits (220), Expect = 3.490e-18
Identity = 45/125 (36.00%), Postives = 72/125 (57.60%), Query Frame = 0
Query:    4 LIENGVWTQVERSKSKLVVSTMMIYKRKIGEDGIMEKYKYRLVAHRNHQIKGIHFQEASSPAPAAASTKMVLTLAAIQDWELRHVDFEKTYLQAPIDQEIFVEIPVNYGEFPGAVGRLDKAIYGL 128
            L++N  +  V+    K  +S   +YK K  E     +YK RLV     Q+ G+ FQE  SP    +S + ++++AA++DW++ H+D +  YL   +++EI+V  P N+ E  G V RL KA+YGL
Sbjct:  856 LVKNNTYEVVDLPPGKKTLSMKWVYKIKETEGD--RRYKARLVVRGCAQVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGL 978          
BLAST of mRNA_H-paniculata_contig52751.12654.1 vs. uniprot
Match: A0A8I6XHP4_HORVV (Uncharacterized protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6XHP4_HORVV)

HSP 1 Score: 89.0 bits (219), Expect = 4.640e-18
Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = 0
Query:    1 MQGLIENGVWTQVERSKSKLVVSTMMIYKRKIGEDGIMEKYKYRLVAHRNHQIKGIHFQEASSPAPAAASTKMVLTLAAIQDWELRHVDFEKTYLQAPIDQEIFVEIPVNY---GEFPGAVGRLDKAIYGL 128
            M+ +  NG WT V R  ++  V    +YK K    G + KYK RLVA    Q +G+ + E  +P     + +++L LAA +DW++ H+D +  +L   + +E++VE P+ Y   GE  G V +L KA+YGL
Sbjct:  690 MKAIESNGTWTLVTRPPNQKTVGLKWVYKLKKDTKGAIVKYKARLVAKGYVQRQGVDYDEVFAPVARIETVRVLLALAAQEDWKVHHMDVKSAFLNGDLTEEVYVEQPLGYEKKGE-EGKVYKLKKALYGL 819          
BLAST of mRNA_H-paniculata_contig52751.12654.1 vs. uniprot
Match: A0A2N9GGA8_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GGA8_FAGSY)

HSP 1 Score: 87.4 bits (215), Expect = 1.550e-17
Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = 0
Query:   10 WTQVERSKSKLVVSTMMIYKRKIGEDGIMEKYKYRLVAHRNHQIKGIHFQEASSPAPAAASTKMVLTLAAIQDWELRHVDFEKTYLQAPIDQEIFVEIPVNY--GEFPGAVGRLDKAIYGL 128
            WT V  S S+ +V    +YK K   DG +  YK RLVA   HQ  G+ F E  SP    A+ +++L++AA Q+W LR +D    +L   + + +++E P  Y   +FP  V +L KA+YGL
Sbjct:  250 WTLVPPSPSQNIVGCRWVYKLKRNSDGSISSYKARLVAKGYHQQHGMDFDETFSPVVKLATLRLILSIAAQQNWGLRQLDVSNAFLHGFLKETVYMEQPQGYVDSQFPHHVCQLKKALYGL 370          
BLAST of mRNA_H-paniculata_contig52751.12654.1 vs. uniprot
Match: A0A5A7TC06_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7TC06_CUCME)

HSP 1 Score: 87.0 bits (214), Expect = 2.100e-17
Identity = 46/130 (35.38%), Postives = 71/130 (54.62%), Query Frame = 0
Query:    1 MQGLIENGVWTQVERSKSKLVVSTMMIYKRKIGEDGIMEKYKYRLVAHRNHQIKGIHFQEASSPAPAAASTKMVLTLAAIQDWELRHVDFEKTYLQAPIDQEIFVEIPVNY--GEFPGAVGRLDKAIYGL 128
            M  + +NG W  V+  K K  +    +YK K   DG +EK+K RLVA  + Q  GI+F+E  SP     + ++VL LAA Q W +   D +  +L   +++E++VE P  +   +    V +L KA+YGL
Sbjct:  460 MTTIEKNGTWKMVDLPKGKNAIDLKWVYKTKFAADGSLEKHKARLVAKGHAQQHGINFEETFSPVARFETVRVVLALAAQQQWSVYQFDVKSDFLNEELEEEVYVEQPKGFVKKDSEEKVYKLTKALYGL 589          
BLAST of mRNA_H-paniculata_contig52751.12654.1 vs. uniprot
Match: A0A5K0XK81_9MAGN (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K0XK81_9MAGN)

HSP 1 Score: 86.7 bits (213), Expect = 2.190e-17
Identity = 44/128 (34.38%), Postives = 72/128 (56.25%), Query Frame = 0
Query:    1 MQGLIENGVWTQVERSKSKLVVSTMMIYKRKIGEDGIMEKYKYRLVAHRNHQIKGIHFQEASSPAPAAASTKMVLTLAAIQDWELRHVDFEKTYLQAPIDQEIFVEIPVNYGE--FPGAVGRLDKAIY 126
            M  LI N  WT V R  S  ++ +  +YK K+  DG +++ K RLVA    QI+G+ F E  SP    A+ ++VL++A +  W L+H+D +   L   + + +F+E P  + +  FP  V +L+ A+Y
Sbjct:  305 MAALIANDTWTLVPRDPSMHIIGSRWVYKTKLNSDGHIDRLKARLVAQGYTQIEGVDFLETFSPVVKPATIRIVLSVALMNGWPLKHLDVKNALLNGYLTEIVFIEQPPGFQDAWFPHQVCKLNPALY 432          
BLAST of mRNA_H-paniculata_contig52751.12654.1 vs. uniprot
Match: A0A2N9GHR4_FAGSY (Uncharacterized protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GHR4_FAGSY)

HSP 1 Score: 86.7 bits (213), Expect = 3.100e-17
Identity = 46/129 (35.66%), Postives = 68/129 (52.71%), Query Frame = 0
Query:    2 QGLIENGVWTQVERSKSKLVVSTMMIYKRKIGEDGIMEKYKYRLVAHRNHQIKGIHFQEASSPAPAAASTKMVLTLAAIQDWELRHVDFEKTYLQAPIDQEIFVEIPVNY--GEFPGAVGRLDKAIYGL 128
            Q L     WT V  S  + +V    +YK K   DG + +YK RLVA   HQ  G+ F E  SP    A+ +++L+LAA Q W LR +D    +L   + + +++E P  +    +P  V +L KA+YGL
Sbjct: 1241 QALQRQETWTLVPPSSEQNLVGCRWVYKLKRNSDGSIARYKARLVAKGYHQQPGMDFDETFSPVVKPATVRLILSLAAQQQWSLRQLDVSNAFLHGLLKETVYMEQPPGFVDSSYPHHVCKLQKALYGL 1369          
BLAST of mRNA_H-paniculata_contig52751.12654.1 vs. uniprot
Match: UPI0008FD5801 (uncharacterized protein LOC109116481 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI0008FD5801)

HSP 1 Score: 84.7 bits (208), Expect = 9.160e-17
Identity = 47/134 (35.07%), Postives = 71/134 (52.99%), Query Frame = 0
Query:    1 MQGLIENGVWTQVERSKSKLVVSTMMIYKRKIGEDGIMEKYKYRLVAHRNHQIKGIHFQEASSPAPAAASTKMVLTLAAIQDWELRHVDFEKTYLQAPIDQEIFVEIPVNY-----GEFP-GAVGRLDKAIYGL 128
            +  L+ NG W+ V     K  V    +YK K   DG +E+YK RLVA    Q +G+ F +  SP     + K++L LAA Q+W L  +D    +L   +++EI++ +P  Y     G  P  AV +L K++YGL
Sbjct:    5 LDALVGNGTWSVVSLPPGKRAVGCKWVYKIKRKADGSVERYKARLVAKGFTQQEGVDFIDTFSPVAKLVTVKLLLALAAKQNWILTQMDVTNAFLHGDLEEEIYMSLPPGYTDAQSGNMPRDAVCKLQKSLYGL 138          
BLAST of mRNA_H-paniculata_contig52751.12654.1 vs. uniprot
Match: A0A2N9IXX5_FAGSY (CCHC-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IXX5_FAGSY)

HSP 1 Score: 85.1 bits (209), Expect = 1.030e-16
Identity = 42/129 (32.56%), Postives = 72/129 (55.81%), Query Frame = 0
Query:    2 QGLIENGVWTQVERSKSKLVVSTMMIYKRKIGEDGIMEKYKYRLVAHRNHQIKGIHFQEASSPAPAAASTKMVLTLAAIQDWELRHVDFEKTYLQAPIDQEIFVEIPVNY--GEFPGAVGRLDKAIYGL 128
            Q L     WT V  S ++ +V    +YK K   DG + +YK RLVA   HQ +G+ + E  SP    A+ +++L++AA Q+W L+ +D    +L   + + ++++ P  +   ++P  V +L KA+YGL
Sbjct:  398 QALQRQNTWTLVPSSSTQNLVGCRWVYKLKRNSDGSIARYKARLVAKGYHQQQGMDYDETFSPVVKPATVRLILSIAAQQNWSLKQLDVSNAFLHGLLKENVYMQQPPGFIDPQYPKHVCQLQKALYGL 526          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig52751.12654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6D2KD17_9BRAS2.140e-1938.84Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A6H5GI29_9HEMI3.330e-1836.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5GGZ1_9HEMI3.490e-1836.00Integrase catalytic domain-containing protein (Fra... [more]
A0A8I6XHP4_HORVV4.640e-1835.88Uncharacterized protein n=1 Tax=Hordeum vulgare su... [more]
A0A2N9GGA8_FAGSY1.550e-1738.02Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5A7TC06_CUCME2.100e-1735.38Retrovirus-related Pol polyprotein from transposon... [more]
A0A5K0XK81_9MAGN2.190e-1734.38Integrase catalytic domain-containing protein (Fra... [more]
A0A2N9GHR4_FAGSY3.100e-1735.66Uncharacterized protein n=2 Tax=Fagus sylvatica Ta... [more]
UPI0008FD58019.160e-1735.07uncharacterized protein LOC109116481 n=1 Tax=Taren... [more]
A0A2N9IXX5_FAGSY1.030e-1632.56CCHC-type domain-containing protein n=1 Tax=Fagus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..128
e-value: 7.5E-20
score: 71.6
NoneNo IPR availablePANTHERPTHR11439:SF287coord: 7..128
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 7..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig52751contigH-paniculata_contig52751:1..384 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig52751.12654.1mRNA_H-paniculata_contig52751.12654.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig52751 1..387 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig52751.12654.1 ID=prot_H-paniculata_contig52751.12654.1|Name=mRNA_H-paniculata_contig52751.12654.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=128bp
MQGLIENGVWTQVERSKSKLVVSTMMIYKRKIGEDGIMEKYKYRLVAHRN
HQIKGIHFQEASSPAPAAASTKMVLTLAAIQDWELRHVDFEKTYLQAPID
QEIFVEIPVNYGEFPGAVGRLDKAIYGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like