prot_H-paniculata_contig52714.12651.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig52714.12651.1
Unique Nameprot_H-paniculata_contig52714.12651.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length42
Homology
BLAST of mRNA_H-paniculata_contig52714.12651.1 vs. uniprot
Match: A0A6H5L470_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L470_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.570e-12
Identity = 36/41 (87.80%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    2 EPPEKEFMVCALDLLSGMSEGLGQGFETLLASSNLLPLLLQ 42
            EPPEKEFMVCALDLLSGMSEGLG  F +LLASSNLL LLLQ
Sbjct:  637 EPPEKEFMVCALDLLSGMSEGLGGSFGSLLASSNLLQLLLQ 677          
BLAST of mRNA_H-paniculata_contig52714.12651.1 vs. uniprot
Match: H2ZM70_CIOSA (Importin N-terminal domain-containing protein n=6 Tax=Ciona TaxID=7718 RepID=H2ZM70_CIOSA)

HSP 1 Score: 57.0 bits (136), Expect = 2.540e-8
Identity = 25/39 (64.10%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    2 EPPEKEFMVCALDLLSGMSEGLGQGFETLLASSNLLPLL 40
            +PP+K+FM+ ALDLLSG++EGLG G E L+ SSN+LPL+
Sbjct:  649 DPPDKDFMIVALDLLSGLAEGLGSGIEQLVQSSNILPLM 687          
BLAST of mRNA_H-paniculata_contig52714.12651.1 vs. uniprot
Match: H2ZM67_CIOSA (Importin N-terminal domain-containing protein n=2 Tax=Ciona savignyi TaxID=51511 RepID=H2ZM67_CIOSA)

HSP 1 Score: 57.0 bits (136), Expect = 2.540e-8
Identity = 25/39 (64.10%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    2 EPPEKEFMVCALDLLSGMSEGLGQGFETLLASSNLLPLL 40
            +PP+K+FM+ ALDLLSG++EGLG G E L+ SSN+LPL+
Sbjct:  623 DPPDKDFMIVALDLLSGLAEGLGSGIEQLVQSSNILPLM 661          
BLAST of mRNA_H-paniculata_contig52714.12651.1 vs. uniprot
Match: A0A438K3Z1_VITVI (Transportin-1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438K3Z1_VITVI)

HSP 1 Score: 53.1 bits (126), Expect = 8.840e-8
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    5 EKEFMVCALDLLSGMSEGLGQGFETLLASSNLLPLLLQ 42
            +KEF+VC+LDLLSG++EGLG G E+L A SNL  LLLQ
Sbjct:   33 DKEFIVCSLDLLSGLAEGLGSGIESLAAQSNLRDLLLQ 70          
BLAST of mRNA_H-paniculata_contig52714.12651.1 vs. uniprot
Match: A0A2G5ELS1_AQUCA (Importin N-terminal domain-containing protein n=6 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5ELS1_AQUCA)

HSP 1 Score: 55.1 bits (131), Expect = 1.210e-7
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    5 EKEFMVCALDLLSGMSEGLGQGFETLLASSNLLPLLLQ 42
            +KEF+VC+LDLLSG++EGLG G ETL+A SNL  LLLQ
Sbjct:  631 DKEFIVCSLDLLSGLAEGLGAGIETLVAQSNLRDLLLQ 668          
BLAST of mRNA_H-paniculata_contig52714.12651.1 vs. uniprot
Match: A0A6P5F4Z5_ANACO (LOW QUALITY PROTEIN: transportin-1-like n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5F4Z5_ANACO)

HSP 1 Score: 55.1 bits (131), Expect = 1.210e-7
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    5 EKEFMVCALDLLSGMSEGLGQGFETLLASSNLLPLLLQ 42
            EKEF+VC+LDLLSG++EGLG G E+L+A SNL  LLLQ
Sbjct:  630 EKEFIVCSLDLLSGLAEGLGSGIESLVAQSNLRDLLLQ 667          
BLAST of mRNA_H-paniculata_contig52714.12651.1 vs. uniprot
Match: A0A6V7Q6W7_ANACO (Uncharacterized protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7Q6W7_ANACO)

HSP 1 Score: 55.1 bits (131), Expect = 1.210e-7
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    5 EKEFMVCALDLLSGMSEGLGQGFETLLASSNLLPLLLQ 42
            EKEF+VC+LDLLSG++EGLG G E+L+A SNL  LLLQ
Sbjct:  576 EKEFIVCSLDLLSGLAEGLGSGIESLVAQSNLRDLLLQ 613          
BLAST of mRNA_H-paniculata_contig52714.12651.1 vs. uniprot
Match: A0A453DL83_AEGTS (Uncharacterized protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453DL83_AEGTS)

HSP 1 Score: 54.3 bits (129), Expect = 1.280e-7
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    5 EKEFMVCALDLLSGMSEGLGQGFETLLASSNLLPLLLQ 42
            +KEF+VCALDLLSG++EGLG G E+L+A SNL  LLLQ
Sbjct:   12 DKEFIVCALDLLSGLTEGLGGGIESLVAQSNLRDLLLQ 49          
BLAST of mRNA_H-paniculata_contig52714.12651.1 vs. uniprot
Match: A0A446LPN9_TRITD (Importin N-terminal domain-containing protein n=11 Tax=Triticinae TaxID=1648030 RepID=A0A446LPN9_TRITD)

HSP 1 Score: 54.3 bits (129), Expect = 2.270e-7
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    5 EKEFMVCALDLLSGMSEGLGQGFETLLASSNLLPLLLQ 42
            +KEF+VCALDLLSG++EGLG G E+L+A SNL  LLLQ
Sbjct:  634 DKEFIVCALDLLSGLTEGLGGGIESLVAQSNLRDLLLQ 671          
BLAST of mRNA_H-paniculata_contig52714.12651.1 vs. uniprot
Match: A0A6J5Y4Y0_PRUAR (Importin N-terminal domain-containing protein n=2 Tax=Prunus TaxID=3754 RepID=A0A6J5Y4Y0_PRUAR)

HSP 1 Score: 54.3 bits (129), Expect = 2.270e-7
Identity = 26/40 (65.00%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    3 PPEKEFMVCALDLLSGMSEGLGQGFETLLASSNLLPLLLQ 42
            P +KEF+VC+LDLLSG++EGLG G E+L++ SNL  LLLQ
Sbjct:  629 PYDKEFIVCSLDLLSGLAEGLGSGIESLVSQSNLRDLLLQ 668          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig52714.12651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L470_9PHAE1.570e-1287.80Importin N-terminal domain-containing protein n=2 ... [more]
H2ZM70_CIOSA2.540e-864.10Importin N-terminal domain-containing protein n=6 ... [more]
H2ZM67_CIOSA2.540e-864.10Importin N-terminal domain-containing protein n=2 ... [more]
A0A438K3Z1_VITVI8.840e-868.42Transportin-1 n=1 Tax=Vitis vinifera TaxID=29760 R... [more]
A0A2G5ELS1_AQUCA1.210e-771.05Importin N-terminal domain-containing protein n=6 ... [more]
A0A6P5F4Z5_ANACO1.210e-771.05LOW QUALITY PROTEIN: transportin-1-like n=2 Tax=An... [more]
A0A6V7Q6W7_ANACO1.210e-771.05Uncharacterized protein n=1 Tax=Ananas comosus var... [more]
A0A453DL83_AEGTS1.280e-771.05Uncharacterized protein n=2 Tax=Aegilops tauschii ... [more]
A0A446LPN9_TRITD2.270e-771.05Importin N-terminal domain-containing protein n=11... [more]
A0A6J5Y4Y0_PRUAR2.270e-765.00Importin N-terminal domain-containing protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..42
e-value: 1.7E-11
score: 45.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig52714contigH-paniculata_contig52714:496..621 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig52714.12651.1mRNA_H-paniculata_contig52714.12651.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig52714 496..624 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig52714.12651.1 ID=prot_H-paniculata_contig52714.12651.1|Name=mRNA_H-paniculata_contig52714.12651.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=42bp
MEPPEKEFMVCALDLLSGMSEGLGQGFETLLASSNLLPLLLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like