prot_H-paniculata_contig52618.12638.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig52618.12638.1
Unique Nameprot_H-paniculata_contig52618.12638.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length86
Homology
BLAST of mRNA_H-paniculata_contig52618.12638.1 vs. uniprot
Match: D7G647_ECTSI (RTW, Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G647_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 4.620e-43
Identity = 68/77 (88.31%), Postives = 74/77 (96.10%), Query Frame = 0
Query:    1 MERYLMDEYNPRQLPTFALTLFRKNARLGNGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSLT 77
            +ERYLMDEYNPRQL TFALTLFRKNA+L +G EVKVDFWDTAGQERFSSMHPSYYYRAHACI+VFDVTRKATYK+L+
Sbjct:   40 VERYLMDEYNPRQLSTFALTLFRKNAKLDDGVEVKVDFWDTAGQERFSSMHPSYYYRAHACIMVFDVTRKATYKNLS 116          
BLAST of mRNA_H-paniculata_contig52618.12638.1 vs. uniprot
Match: A0A835ZG89_9STRA (RTW, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG89_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.410e-38
Identity = 63/76 (82.89%), Postives = 69/76 (90.79%), Query Frame = 0
Query:    1 MERYLMDEYNPRQLPTFALTLFRKNARLGNGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSL 76
            +ERYLMDEY+PRQL TFALTLFRKNA L +G    VDFWDTAGQERF+SMHPSYYYRAHACI+VFDVTRKATYK+L
Sbjct:   36 VERYLMDEYSPRQLSTFALTLFRKNAVLEDGTRTTVDFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNL 111          
BLAST of mRNA_H-paniculata_contig52618.12638.1 vs. uniprot
Match: UPI0014556C86 (rab-like protein 2A n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014556C86)

HSP 1 Score: 124 bits (310), Expect = 1.820e-33
Identity = 58/76 (76.32%), Postives = 67/76 (88.16%), Query Frame = 0
Query:    1 MERYLMDEYNPRQLPTFALTLFRKNARLGNGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSL 76
            +ER+LMD Y P+QL TFALTLFR N ++G G EV VDFWDTAGQERFSSMHPSYY++AHACI+VFDVTRK TYK+L
Sbjct:   34 VERFLMDGYQPQQLSTFALTLFRYNTKVG-GKEVSVDFWDTAGQERFSSMHPSYYHQAHACIMVFDVTRKVTYKNL 108          
BLAST of mRNA_H-paniculata_contig52618.12638.1 vs. uniprot
Match: A0A8B7Z9Q5_ACAPL (rab-like protein 2A n=2 Tax=Valvatida TaxID=41166 RepID=A0A8B7Z9Q5_ACAPL)

HSP 1 Score: 122 bits (306), Expect = 8.040e-33
Identity = 57/76 (75.00%), Postives = 67/76 (88.16%), Query Frame = 0
Query:    1 MERYLMDEYNPRQLPTFALTLFRKNARLGNGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSL 76
            +ER+LMD Y P+QL T+ALTLFR N ++G G EV VDFWDTAGQERFSSMHPSYY++AHACI+VFDVTRK TYK+L
Sbjct:   38 VERFLMDGYQPQQLSTYALTLFRYNTKVG-GQEVAVDFWDTAGQERFSSMHPSYYHQAHACIMVFDVTRKVTYKNL 112          
BLAST of mRNA_H-paniculata_contig52618.12638.1 vs. uniprot
Match: A0A2D4BD48_PYTIN (Rab family, other n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BD48_PYTIN)

HSP 1 Score: 121 bits (303), Expect = 9.040e-33
Identity = 59/80 (73.75%), Postives = 65/80 (81.25%), Query Frame = 0
Query:    1 MERYLMDEYNPRQLPTFALTLFRKNARL----GNGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSL 76
            +ER++MDE+ PRQL TFALTLFRK   L    G    VKVDFWDTAGQERFSSMHPSYYY AHACILVFDVTRK TY++L
Sbjct:   35 VERFMMDEFQPRQLSTFALTLFRKEVELEDERGKPQIVKVDFWDTAGQERFSSMHPSYYYGAHACILVFDVTRKTTYQNL 114          
BLAST of mRNA_H-paniculata_contig52618.12638.1 vs. uniprot
Match: A0A125SEA2_9EUKA (RABL2 n=1 Tax=Gefionella okellyi TaxID=2853422 RepID=A0A125SEA2_9EUKA)

HSP 1 Score: 120 bits (302), Expect = 1.500e-32
Identity = 54/77 (70.13%), Postives = 68/77 (88.31%), Query Frame = 0
Query:    1 MERYLMDEYNPRQLPTFALTLFRKNARLGNGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSLT 77
            +ER++MD Y+P+QL T+ALTLF  NA + +G +VKVDFWDTAGQERF+SMHPSYYY+AH C+LVFDVTRK TYK+L+
Sbjct:   38 VERFMMDAYHPQQLSTYALTLFEHNAEI-DGRKVKVDFWDTAGQERFNSMHPSYYYKAHVCLLVFDVTRKVTYKNLS 113          
BLAST of mRNA_H-paniculata_contig52618.12638.1 vs. uniprot
Match: A9VEC1_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VEC1_MONBE)

HSP 1 Score: 119 bits (298), Expect = 3.540e-32
Identity = 55/76 (72.37%), Postives = 66/76 (86.84%), Query Frame = 0
Query:    1 MERYLMDEYNPRQLPTFALTLFRKNARLGNGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSL 76
            +ER+LMD+Y P QL TFALTLFR NA++  G +V VDFWDTAGQERF+S+HPSYY+ AH+CILVFDVTRK TYK+L
Sbjct:   24 VERFLMDDYKPHQLSTFALTLFRHNAKV-EGKDVVVDFWDTAGQERFASVHPSYYHEAHSCILVFDVTRKVTYKNL 98          
BLAST of mRNA_H-paniculata_contig52618.12638.1 vs. uniprot
Match: A0A8J2WYL7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WYL7_9STRA)

HSP 1 Score: 119 bits (299), Expect = 4.030e-32
Identity = 55/76 (72.37%), Postives = 66/76 (86.84%), Query Frame = 0
Query:    1 MERYLMDEYNPRQLPTFALTLFRKNARLGNGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSL 76
            +ER+LMDEYNP+QL T+ALT+FRKN  + +G  VKVD WDTAGQERF+ MHP+YY+RAHACIL FDVTRKATY+ L
Sbjct:   45 VERFLMDEYNPQQLSTYALTMFRKNLDI-DGKNVKVDIWDTAGQERFNKMHPAYYHRAHACILCFDVTRKATYQHL 119          
BLAST of mRNA_H-paniculata_contig52618.12638.1 vs. uniprot
Match: A0A1S3I0L2_LINUN (rab-like protein 2A n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I0L2_LINUN)

HSP 1 Score: 117 bits (293), Expect = 5.420e-32
Identity = 56/76 (73.68%), Postives = 65/76 (85.53%), Query Frame = 0
Query:    1 MERYLMDEYNPRQLPTFALTLFRKNARLGNGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSL 76
            +ER+LMD Y P+QL T+ALTLFR   ++ N  EV VDFWDTAGQERFSSMHPSYY++AHACILVFDVTRK TYK+L
Sbjct:   36 VERFLMDGYQPQQLSTYALTLFRYKTKV-NKKEVAVDFWDTAGQERFSSMHPSYYHQAHACILVFDVTRKITYKNL 110          
BLAST of mRNA_H-paniculata_contig52618.12638.1 vs. uniprot
Match: A0A8K1CGD5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGD5_PYTOL)

HSP 1 Score: 119 bits (297), Expect = 7.090e-32
Identity = 56/82 (68.29%), Postives = 66/82 (80.49%), Query Frame = 0
Query:    1 MERYLMDEYNPRQLPTFALTLFRKNARL----GNGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSLTG 78
            +ER++M+E+ PRQL TFALTLFRK   +    G    +KVDFWDTAGQERFSSMHPSYYY A ACI+VFDVTRK TY++LTG
Sbjct:   33 VERFMMNEFQPRQLSTFALTLFRKEVEIPDEKGKSQVIKVDFWDTAGQERFSSMHPSYYYGATACIMVFDVTRKVTYQNLTG 114          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig52618.12638.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G647_ECTSI4.620e-4388.31RTW, Ras superfamily GTPase n=2 Tax=Ectocarpus Tax... [more]
A0A835ZG89_9STRA1.410e-3882.89RTW, ras superfamily GTPase n=1 Tax=Tribonema minu... [more]
UPI0014556C861.820e-3376.32rab-like protein 2A n=1 Tax=Asterias rubens TaxID=... [more]
A0A8B7Z9Q5_ACAPL8.040e-3375.00rab-like protein 2A n=2 Tax=Valvatida TaxID=41166 ... [more]
A0A2D4BD48_PYTIN9.040e-3373.75Rab family, other n=1 Tax=Pythium insidiosum TaxID... [more]
A0A125SEA2_9EUKA1.500e-3270.13RABL2 n=1 Tax=Gefionella okellyi TaxID=2853422 Rep... [more]
A9VEC1_MONBE3.540e-3272.37Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A8J2WYL7_9STRA4.030e-3272.37Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1S3I0L2_LINUN5.420e-3273.68rab-like protein 2A n=1 Tax=Lingula unguis TaxID=7... [more]
A0A8K1CGD5_PYTOL7.090e-3268.29Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..85
e-value: 0.0063
score: -73.2
NoneNo IPR availableGENE3D3.40.50.300coord: 1..79
e-value: 3.0E-19
score: 70.9
NoneNo IPR availablePANTHERPTHR24073:SF263RAB-LIKE PROTEIN 2A-RELATEDcoord: 1..77
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..77
NoneNo IPR availablePROSITEPS51419RABcoord: 1..85
score: 12.46
IPR001806Small GTPasePFAMPF00071Rascoord: 2..76
e-value: 4.1E-17
score: 62.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig52618contigH-paniculata_contig52618:348..1022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig52618.12638.1mRNA_H-paniculata_contig52618.12638.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig52618 303..1080 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig52618.12638.1 ID=prot_H-paniculata_contig52618.12638.1|Name=mRNA_H-paniculata_contig52618.12638.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp
MERYLMDEYNPRQLPTFALTLFRKNARLGNGAEVKVDFWDTAGQERFSSM
HPSYYYRAHACILVFDVTRKATYKSLTGTGAAAVL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase