prot_H-paniculata_contig521.12572.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig521.12572.1
Unique Nameprot_H-paniculata_contig521.12572.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length135
Homology
BLAST of mRNA_H-paniculata_contig521.12572.1 vs. uniprot
Match: D7FPJ6_ECTSI (DUF667 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ6_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 2.960e-30
Identity = 59/93 (63.44%), Postives = 72/93 (77.42%), Query Frame = 0
Query:    1 MVYEDLPPIAAAIQACSVLQEGNEASVFDDEELSIQVVELLGRRCSVSFPCSSILRFLCLHIKVSAFLFFVFQVLNMFRRQRQQRRRNDTQLT 93
            MVYEDL P+AAA+Q C VLQEGNEASVFDDEEL +QVVELLGRRC V+FPCSSILR+LCLH+KV+ FL  +  +++  ++    R R  T  T
Sbjct:   49 MVYEDLQPVAAAMQECEVLQEGNEASVFDDEELGVQVVELLGRRCGVAFPCSSILRYLCLHVKVTQFLRVIHSIVSGKQKDGCCRARETTCAT 141          
BLAST of mRNA_H-paniculata_contig521.12572.1 vs. uniprot
Match: A0A835YVF2_9STRA (DUF667 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF2_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.120e-9
Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 0
Query:    3 YEDLPPIAAAIQACSVLQEGNEASVFDDEELSIQVVELLGRRCSVSFPCSSILRFLCLHIKV 64
            Y DL  ++AA++ C +L   NE S +DDEEL +Q++E+LG    V+FPC  +   LC H+K+
Sbjct:   35 YADLQAVSAAMRECELLGGDNEISAYDDEELGVQMLEILGESARVAFPCYCVRPILCAHLKM 96          
BLAST of mRNA_H-paniculata_contig521.12572.1 vs. uniprot
Match: A0A7S2UXE7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXE7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 6.070e-8
Identity = 31/61 (50.82%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    4 EDLPPIAAAIQACSVLQEGNEASVFDDEELSIQ-VVELLGRRCSVSFPCSSILRFLCLHIK 63
            E+L  I  A + CS++ EGN+ +V DDEEL  + VVE++GRR ++SF  +SILR+L L+IK
Sbjct:   35 EELHCILMAQEECSIMGEGNDIAVVDDEELGNEAVVEIVGRRANISFTSTSILRYLMLYIK 95          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig521.12572.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FPJ6_ECTSI2.960e-3063.44DUF667 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YVF2_9STRA1.120e-943.55DUF667 domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S2UXE7_9STRA6.070e-850.82Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..53
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 79..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..78
NoneNo IPR availableTMHMMTMhelixcoord: 54..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig521contigH-paniculata_contig521:22372..22951 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig521.12572.1mRNA_H-paniculata_contig521.12572.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig521 21608..23020 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig521.12572.1 ID=prot_H-paniculata_contig521.12572.1|Name=mRNA_H-paniculata_contig521.12572.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=135bp
MVYEDLPPIAAAIQACSVLQEGNEASVFDDEELSIQVVELLGRRCSVSFP
CSSILRFLCLHIKVSAFLFFVFQVLNMFRRQRQQRRRNDTQLTPPFICPK
GLVLLDYRCACFGSLLPHLHICLTHPPADRCPPS*
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