prot_H-paniculata_contig52038.12561.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig52038.12561.1
Unique Nameprot_H-paniculata_contig52038.12561.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length78
Homology
BLAST of mRNA_H-paniculata_contig52038.12561.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 1.200e-15
Identity = 37/88 (42.05%), Postives = 49/88 (55.68%), Query Frame = 0
Query:    1 SCLDNRSHSHAFGHNLGCYLNRENTNVNKPYEHGYRTCDTQLPFSTIMSVK---CSSGQAP-------RINFYSNPEATWRGLPTGTA 78
            +C DN SH+H   HN+GCY +R+N+     Y HGYR C    P+ TIMS     C     P       ++N++SNPE T+   PTGTA
Sbjct:  478 NCFDNFSHTHEIAHNMGCYHDRDNSETQDEYRHGYRYCTGSDPYRTIMSYYQNGCGGDPTPEADPIVPQVNYFSNPEVTYLNKPTGTA 565          
BLAST of mRNA_H-paniculata_contig52038.12561.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.750e-13
Identity = 34/88 (38.64%), Postives = 48/88 (54.55%), Query Frame = 0
Query:    1 SCLDNRSHSHAFGHNLGCYLNRENTNVNKPYEHGYRTCDTQLPFSTIMSVK---CSSGQA-------PRINFYSNPEATWRGLPTGTA 78
            +C DN SH+H   HN+GCY ++ N++    Y HG+R C+   P+ TIMS     C            PR+N++SNP  T+    TGTA
Sbjct:  298 NCFDNFSHTHEIAHNMGCYHDKNNSDTQHAYRHGWRYCEGADPYRTIMSYYHNGCGGDPTSEDDPIVPRVNYFSNPNVTYLNKSTGTA 385          
BLAST of mRNA_H-paniculata_contig52038.12561.1 vs. uniprot
Match: D8LCC0_ECTSI (Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC0_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 1.850e-11
Identity = 31/76 (40.79%), Postives = 41/76 (53.95%), Query Frame = 0
Query:    2 CLDNRSHSHAFGHNLGCYLNRENTNVNKPYEHGYRTCDTQLPFSTIMSVKCSSGQAPRINFYSNPEATWRGLPTGT 77
            CLDN SH H  GHN+G   NRE+T+    Y H  R C    P+ TIM+ +    QAPR+  +S  + T+     GT
Sbjct:  323 CLDNLSHIHEIGHNMGANHNREDTSSEHDYAHAQRYCTGDTPYRTIMAYETGCLQAPRVAMFSTQDKTYASKSLGT 398          
BLAST of mRNA_H-paniculata_contig52038.12561.1 vs. uniprot
Match: A0A7T0G2Z3_9BACT (Uncharacterized protein n=1 Tax=Candidatus Nitrohelix vancouverensis TaxID=2705534 RepID=A0A7T0G2Z3_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 9.560e-9
Identity = 29/78 (37.18%), Postives = 40/78 (51.28%), Query Frame = 0
Query:    2 CLDNRSHSHAFGHNLGCYLNRENTNV-NKPYEHGYRTCDTQLPFSTIMSVKCSSGQAPRINFYSNPEATWRGLPTGTA 78
            C+ N + +H  GHNLG   +R N N  N P+   +   DT   F TIM  +       RI ++SNP+AT+ G   G A
Sbjct:  308 CISNHTFTHEIGHNLGARHDRANDNTDNSPFTFNHGYIDTSNNFRTIMGTQTGCSTCTRIQYWSNPDATYNGAVLGVA 385          
BLAST of mRNA_H-paniculata_contig52038.12561.1 vs. uniprot
Match: T2G9U4_MEGG1 (Uncharacterized protein n=2 Tax=Megalodesulfovibrio gigas TaxID=879 RepID=T2G9U4_MEGG1)

HSP 1 Score: 57.8 bits (138), Expect = 6.120e-8
Identity = 27/72 (37.50%), Postives = 40/72 (55.56%), Query Frame = 0
Query:    7 SHSHAFGHNLGCYLNRENTNVNK--PYEHGYRTCDTQLPFSTIMSVKCSSGQAPRINFYSNPEATWRGLPTG 76
            S +H  GHN G + +R +T+      Y +GY+       F TIM+  CS     R+N++SNPE ++ G PTG
Sbjct:  318 SFAHECGHNQGAHHDRASTSGQGVYSYSYGYQQLSASPQFRTIMAYNCSGDGCERVNYWSNPEVSYNGYPTG 389          
BLAST of mRNA_H-paniculata_contig52038.12561.1 vs. uniprot
Match: A0A0S2F801_LYSAN (Peptidyl-Asp metalloendopeptidase domain protein n=3 Tax=Xanthomonadaceae TaxID=32033 RepID=A0A0S2F801_LYSAN)

HSP 1 Score: 57.0 bits (136), Expect = 1.140e-7
Identity = 30/73 (41.10%), Postives = 40/73 (54.79%), Query Frame = 0
Query:    7 SHSHAFGHNLGCYLN-RENTNVNKPYEHGYRTCDTQLPFSTIMSVKCSSGQAPRINFYSNPEATWRGLPTGTA 78
            S +H  GHN G + +    TN   PY HGY        + TIM+  C S   PR+N++SNP  T+ G+P GTA
Sbjct:  333 SFAHEIGHNFGAHHDPNSGTNGTYPYGHGYWA--PNKTWRTIMAYNCGSN-CPRLNYWSNPNITYNGVPMGTA 402          
BLAST of mRNA_H-paniculata_contig52038.12561.1 vs. uniprot
Match: UPI0012446EA6 (Uncharacterized protein n=5 Tax=Cupriavidus pauculus TaxID=82633 RepID=UPI0012446EA6)

HSP 1 Score: 56.6 bits (135), Expect = 1.600e-7
Identity = 32/80 (40.00%), Postives = 49/80 (61.25%), Query Frame = 0
Query:    3 LDNRSHSHAFGHNLGCYLNRE-NTNVNKPYEHGYRTCDTQLP--FSTIMSVKCSSG-QAPRINFYSNPEATWRGLPTGTA 78
            + N + +H  GH LG   + + +TN N PY +GY+     LP  + TIM+  CSSG   PR+N++S+P  ++RG+P G A
Sbjct:  543 IGNYTFAHEIGHLLGATHDEQTSTNKNYPYGYGYK-----LPGKWRTIMAYSCSSGGDCPRLNYWSSPTLSFRGVPLGDA 617          
BLAST of mRNA_H-paniculata_contig52038.12561.1 vs. uniprot
Match: A0A7V2G4H5_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A7V2G4H5_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 3.040e-7
Identity = 30/75 (40.00%), Postives = 41/75 (54.67%), Query Frame = 0
Query:   10 HAFGHNLGCYLNRENTNVNKPYEH----GYRTCDTQLP--FSTIMSVKCSSGQAPRINFYSNPEATWRGLPTGTA 78
            H  GHN+GC  NR N   N PY +    GY       P  + T+ +V  + G A RI ++SNP+ T+ G+PTG A
Sbjct:  392 HEVGHNMGCLHNRANNASNGPYGNATGGGYSFGREFTPAGYPTMRTVMSAVGSATRIPYFSNPDVTYLGVPTGVA 466          
BLAST of mRNA_H-paniculata_contig52038.12561.1 vs. uniprot
Match: A0A2V8M050_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8M050_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 4.010e-7
Identity = 30/81 (37.04%), Postives = 44/81 (54.32%), Query Frame = 0
Query:    3 LDNRSHSHAFGHNLGCYLNRENTNVNK-------PYEHGYRTCDTQLPFSTIMSVKCSSGQAPRINFYSNPEATWRGLPTG 76
            +DN + +H  GHN+G +  +++ N +        PY +GY+       F TIM+     G  PRIN++SNP  T  GLPTG
Sbjct:  316 VDNYTFAHEMGHNMGAHHAKDDLNPDGTVPSGAYPYSNGYKQKTGPNRFRTIMAYDGDCG-CPRINYWSNPNVTVSGLPTG 395          
BLAST of mRNA_H-paniculata_contig52038.12561.1 vs. uniprot
Match: UPI001926534C (M12 family metallo-peptidase n=1 Tax=Cedecea davisae TaxID=158484 RepID=UPI001926534C)

HSP 1 Score: 54.7 bits (130), Expect = 7.450e-7
Identity = 30/78 (38.46%), Postives = 44/78 (56.41%), Query Frame = 0
Query:    9 SHAFGHNLGCYLNRENTNVNKP------YEHGYRTCDTQLPFS---TIMSVKCSSGQAPRINFYSNPEATWRGLPTGT 77
            +H  GHN+G  ++ E    N        Y HGY+  ++++      TIMS  C+SG   R+N +SNP  T+RGLPTG+
Sbjct:  322 AHEMGHNIG--VSHELAQYNGTPKRLPCYRHGYKH-ESEIALERWRTIMSYNCTSGNCDRLNMFSNPRYTYRGLPTGS 396          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig52038.12561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5JF50_9PHAE1.200e-1542.05LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
A0A6H5JRC1_9PHAE1.750e-1338.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCC0_ECTSI1.850e-1140.79Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarp... [more]
A0A7T0G2Z3_9BACT9.560e-937.18Uncharacterized protein n=1 Tax=Candidatus Nitrohe... [more]
T2G9U4_MEGG16.120e-837.50Uncharacterized protein n=2 Tax=Megalodesulfovibri... [more]
A0A0S2F801_LYSAN1.140e-741.10Peptidyl-Asp metalloendopeptidase domain protein n... [more]
UPI0012446EA61.600e-740.00Uncharacterized protein n=5 Tax=Cupriavidus paucul... [more]
A0A7V2G4H5_9BACT3.040e-740.00Uncharacterized protein (Fragment) n=1 Tax=Chthoni... [more]
A0A2V8M050_9BACT4.010e-737.04Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
UPI001926534C7.450e-738.46M12 family metallo-peptidase n=1 Tax=Cedecea davis... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig52038contigH-paniculata_contig52038:477..1115 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig52038.12561.1mRNA_H-paniculata_contig52038.12561.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig52038 477..1115 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig52038.12561.1 ID=prot_H-paniculata_contig52038.12561.1|Name=mRNA_H-paniculata_contig52038.12561.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=78bp
SCLDNRSHSHAFGHNLGCYLNRENTNVNKPYEHGYRTCDTQLPFSTIMSV
KCSSGQAPRINFYSNPEATWRGLPTGTA
back to top