prot_H-paniculata_contig51991.12547.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig51991.12547.1 vs. uniprot
Match: A0A6H5JTV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV6_9PHAE) HSP 1 Score: 223 bits (567), Expect = 2.160e-63 Identity = 120/247 (48.58%), Postives = 161/247 (65.18%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGDEDLSDK----------PVRSAVGSLIWLSGMTRTDIASAVRAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVEVMLGGSVVSATSTTQHCVTLSTSEAEYVAMPQGAKAALFTRAVL 236
+YGLKQ+GR W + LV N G Q K+DPCVFR + VV MI+ ++VDD++VAG C+ L A+L +F T GE +W+ GCA RD+ G +S P R A+GS++W+S +R D++ AVRAVAR AH P RHW A+ KI+ YLK T+DLG+ ++RG L L+VYVDA YAD + RRSV+G+ +GG+VVS S TQ V+LS++EAEY+A +G K ALF RAVL
Sbjct: 685 IYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECEWFDGCAIERDVEAGTLRISQTAYIDSMGEEWPAREAIGSMVWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVAGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVL 929
BLAST of mRNA_H-paniculata_contig51991.12547.1 vs. uniprot
Match: A0A6H5KFN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN5_9PHAE) HSP 1 Score: 185 bits (469), Expect = 3.170e-52 Identity = 103/229 (44.98%), Postives = 143/229 (62.45%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTRGELKWYLGCAFWRDIVRGDEDLSDKPVRSAVGSLIWLSGMTRTDIASAVRAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVEVMLGGSVVSATSTTQHCVTLSTSEAEYVAMPQGAKAA 229
+YGLKQ+GR W + LV N G Q K+DPCVFR + VV MI+ ++VDD++VAG C+ + + + G R DE+ + PVR A+GS++W+S +R D++ AVRAVAR AH P R+W A+ KI+ YLK T+DLG+ ++RG L L+VYVDA YAD + RRSVSG+ +GG+V+S S TQ V+LS++EAEY+A G K A
Sbjct: 185 IYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEECQCMVERFDVKSTSRIPATPGADLGPK--REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRNWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVLSHGSKTQSIVSLSSTEAEYIAAEDGVKEA 409
BLAST of mRNA_H-paniculata_contig51991.12547.1 vs. uniprot
Match: A0A6H5JZ67_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ67_9PHAE) HSP 1 Score: 185 bits (470), Expect = 1.310e-51 Identity = 108/235 (45.96%), Postives = 149/235 (63.40%), Query Frame = 0
Query: 3 GLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGDEDLSDKPVRSAVGSLIWLSGMTRTDIASAVRAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVEVMLGGSVVSATSTTQHCVTLSTSEAEYVAMPQGAKAALFTRAVL 236
GLKQ+GR W + LV N G Q K+DPCVFR + VV MI+ V++DD++VAG C L A+L +F T GE + + GCA RD+ E + K ++A+ W+S +R D++ AVRAV R AH RHW A+ K++SYLK T+DLG+ ++R L ++VYV+A Y D + RSVSG+ +GG+VVS S TQ V+LS++EAEY+A +G K ALF RAVL
Sbjct: 274 GLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVVYLDDILVAGSDEDCKGLLASLNKKFPTKNLGECERFDGCAIERDV----ESTTLKISQTAI---TWVSTCSRPDVSFAVRAVERHAHALAKRHWDAIRKVLSYLKETRDLGITYQRRSGLGMAVYVNASYVDTED-NRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAGGEGVKEALFVRAVL 499
BLAST of mRNA_H-paniculata_contig51991.12547.1 vs. uniprot
Match: A0A6H5KTI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI8_9PHAE) HSP 1 Score: 171 bits (432), Expect = 2.340e-49 Identity = 100/211 (47.39%), Postives = 138/211 (65.40%), Query Frame = 0
Query: 39 KNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQT---------TRGELKWY--LGCAFWRDI--VRGDEDLSDKPVRSAVGSLIWLSGMTRTDIASAVRAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVEVMLGGSVVSATSTTQHCVTLSTSEAEYVAMPQGAKAALFTRAVL 236
K+ VV MI+ ++VDD++VAG C L ++ F T R +++ + + DI R DE + PVR A+GS++W+S +R DI+ AVRAVAR AH P +RHWKA+VKI++YLK T+DLG+ +ERG L L+VYVDA YAD + RRSVSG+ +GG+V+S S TQ V+LS++EAEY+A +G K ALF RAVL
Sbjct: 2 KDDVVVMIIVIYVDDILVAGSDDDCKELLDSINKAFPTKDLGECVIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVL 211
BLAST of mRNA_H-paniculata_contig51991.12547.1 vs. uniprot
Match: A0A6H5KQ05_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ05_9PHAE) HSP 1 Score: 175 bits (443), Expect = 2.740e-48 Identity = 105/253 (41.50%), Postives = 147/253 (58.10%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIV----------------RGDEDLSDKPVRSAVGSLIWLSGMTRTDIASAVRAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVEVMLGGSVVSATSTTQHCVTLSTSEAEYVAMPQGAKAALFTRAVL 236
+YGLKQ+GR W LV + Q K+DPCVFR + VV MI+ +++DD++VAG C+ L A+L T GE +W+ G D+ +GDE PVR A+GS++W+S +R D++ AVRA W A+ KI+ Y K T+DLG+ ++RG L L+VYVDA YAD + RRSVSG+ +GG+V+S S TQ V++S++EAEY+A +G K ALF RAVL
Sbjct: 176 IYGLKQSGRQWGYHAAGTLVES-RFEQCKADPCVFRKMVDEVVVMIIVIYLDDILVAGSDEDCEELLASLNKTNPTNSLGECEWFDGMVRRFDVQSTSRIPASPGADLGPKQGDEKGGQWPVREAIGSMMWVSTFSRPDVSFAVRA------------WDAIQKIVGYSKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVISHGSNTQSIVSVSSTEAEYIAAGEGVKEALFVRAVL 414
BLAST of mRNA_H-paniculata_contig51991.12547.1 vs. uniprot
Match: A0A6H5K1X1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X1_9PHAE) HSP 1 Score: 172 bits (437), Expect = 5.770e-48 Identity = 108/243 (44.44%), Postives = 139/243 (57.20%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRG----------------DEDLSDKPVRSAVGSLI-WLSGMTRTDIASAVRAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERG--RDLNLSVYVDAD---YADKSNWRRSVSGVEVMLGGSVVSATSTTQHCVTLSTSEAEYV 220
+YGLKQA R W L L+ +G+ Q +D CVFRL + G V MI+ VHVDD+ AG+ +CD L GEL+WY C + RD+ RG +E +D P R VGSL+ WL+ TR DIA+AVRAVAR +P HW A + I+ Y++RT +G+ FERG +++ V+VDAD Y RRSVSG VM GG V+ S TQ CVTLST+EAEYV
Sbjct: 75 LYGLKQASRHWHAHLTRCLLL-LGLLQCLADACVFRLMEEGNVVMIIVVHVDDIFAAGQKERCDKFGRDLNEMVPVKNLGELRWYSACFYERDVERGLLKISQQSVKLSDFDVNEASADVPFRELVGSLMMWLATQTRPDIANAVRAVARYCASPKMVHWTAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADNAVYCSVVPXRRSVSGGLVMCGGGSVTWFSRTQKCVTLSTTEAEYV 316
BLAST of mRNA_H-paniculata_contig51991.12547.1 vs. uniprot
Match: A0A6H5K5V9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5V9_9PHAE) HSP 1 Score: 171 bits (432), Expect = 1.630e-47 Identity = 104/248 (41.94%), Postives = 141/248 (56.85%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVF-RLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGDEDLSDKPVRSAVGSLIWLSGMTRTDIASAVRAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVEVMLG----------GSVVSATSTTQHCVTLSTSEAEYVAMPQGAKAALFTRAVL 236
+YGLKQ+GR W + V N G Q K+DP VF + VV +I+ ++VDD++V G C+ L A+L +F T GE W R DE+ R A+GS++W+S +R D++ AVRAVAR AH P RHW A+ KI+ YLK T+DLG+ ++RG L L+VYVDA YAD + R + G G+V S S TQ V+LS++EAEY+A +G ALF RAVL
Sbjct: 52 IYGLKQSGRQWGYHAADTPVEN-GFEQCKADPFVFPNMVDEVVVMIIIVIYVDDILVVGSDEDCEELLASLNKKFPTKNLGE---------WPK--REDEERXXXXXREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTEDRRSATVGXXXXXXXXXXXXXXXXGTVASHGSKTQSIVSLSSTEAEYIAAGEGVNEALFVRAVL 287
BLAST of mRNA_H-paniculata_contig51991.12547.1 vs. uniprot
Match: A0A6H5KGA6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGA6_9PHAE) HSP 1 Score: 170 bits (430), Expect = 1.710e-47 Identity = 110/277 (39.71%), Postives = 146/277 (52.71%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRG--------------------------------------DEDLSDKPVRSAVGSLIWLSGMTRTDIASAVRAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGR--DLNLSVYVDADYADKSNWRRSVSGVEVMLGGSVVSATSTTQHCVTLSTSEAEYVAMPQGAKAALFTRAVL 236
+YGL+QA R++ KRLV L +G QS SDPCV R V ++ +HVDD++ G + AL T GE++++LGCAF RD G DE D P R VGSL+W++ TR DI++AVRAVAR +H P H KA KI++YL L L +++ D+ VYVDAD+A K+ RRSVSG V++ +V+ S TQ CVTLST+EAEYVAM G K ALF + +L
Sbjct: 12 LYGLRQASRIFHKRLVSDL-KRIGFEQSLSDPCVLRFMMGDEVLGMIAIHVDDILYEGIERLAKMVVEALGDSLPTKNLGEIRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASLTNDYKSVMEDEGARDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHGKAAQKILNYLLEAAHLTLKYKQDTMVDVGTLVYVDADFASKATDRRSVSGALVLVADCLVAWISRTQKCVTLSTTEAEYVAMGDGVKEALFVKGML 287
BLAST of mRNA_H-paniculata_contig51991.12547.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE) HSP 1 Score: 176 bits (445), Expect = 9.060e-47 Identity = 111/274 (40.51%), Postives = 145/274 (52.92%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGDEDLS--------------------------------------DKPVRSAVGSLIWLSGMTRTDIASAVRAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGR--DLNLSVYVDADYADKSNWRRSVSGVEVMLGGSVVSATSTTQHCVTLSTSEAEYVAMPQGAKAALFTR 233
+YGLKQA R W K LV + +G Q +D CV RL + GVV M++ VHVDD+ GK +C+ L T GEL+ Y G F RD +G LS ++P RS VG L+WL+ TR DI +AVRAVAR ++ P HWKA + ++ Y++ T+ G+ +RG ++L VYVD+DYA K+ RRSVSG VM GS VS S TQ VTLS++EAEY AM G K A+F R
Sbjct: 751 LYGLKQASRTWHKHLVRGM-KCLGFEQCAADACVMRLIEEGVVAMVVVVHVDDIFSIGKKSRCEQFGRDLNEYVPITNLGELRLYAGIRFSRDFAQGTITLSQQTYATNMVAKFGVTRNKETPMAVGVKLEEFDACEPDVEEPFRSLVGHLMWLANQTRPDILNAVRAVARYSYAPKSVHWKAALHMVMYIRCTRAYGITLQRGTAGGVSLEVYVDSDYASKATDRRSVSGGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEAIFLR 1023
BLAST of mRNA_H-paniculata_contig51991.12547.1 vs. uniprot
Match: A0A6H5KEI7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI7_9PHAE) HSP 1 Score: 164 bits (415), Expect = 2.610e-45 Identity = 102/239 (42.68%), Postives = 137/239 (57.32%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGDEDLSDKPVRSAVGSLIWLSGMTRTDIASAVRAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGRDLNLS--VYVDADYADKSNWRRSVSGVEVMLGGSVVSATSTTQHCVTLSTSEAEYVAMPQGAKAALFTRAVL 236
+YGL+QA R + KRLV L+ +G QS SDPCV R + ++ +HVDD++ AG + AL F T GE+K V DE+ D P R VGSL+W++ TR DI++A RAVAR +H P HWKA KI++YL T L ++ + + VYVDAD+A K+ RRSVSG V++ S+V+ S TQ CV+LSTSE EY+AM K ALF +L
Sbjct: 21 LYGLRQASRTFHKRLVSDLMT-IGFEQSLSDPCVLRFIMRDEMMGMVAIHVDDILHAGIERLAKMVVEALGDSFPTKNLGEVK----------SVMEDEEAGDVPFREVVGSLMWIANQTRPDISNAARAVARHSHEPKKSHWKAAQKILNYLLETAHHTLKCKQDDTVEVGTLVYVDADFASKATDRRSVSGALVLVADSLVAWISRTQKCVSLSTSEVEYIAMGDSVKEALFVNGML 248 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51991.12547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig51991.12547.1 ID=prot_H-paniculata_contig51991.12547.1|Name=mRNA_H-paniculata_contig51991.12547.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bpback to top |