prot_H-paniculata_contig5199.12545.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5199.12545.1
Unique Nameprot_H-paniculata_contig5199.12545.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length382
Homology
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BLAST of mRNA_H-paniculata_contig5199.12545.1 vs. uniprot
Match: D7FRT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT6_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 1.280e-6
Identity = 51/133 (38.35%), Postives = 70/133 (52.63%), Query Frame = 0 
Query:    1 MDVYDRDTLIKAVTLPEQG-AED--APPSAMRMFVKKEETSNRINVIISEHGEASGWLSGMTFLCCKQTVTASSEPVLPSIAHRGTDARGSPS---TRQVQLEGLRVGMQRPWGPEGVTGCGPRRVCLSASPV 127
            MD+YDRD LI+AV+L   G A D  A  S MR+FV++E+    I+V IS+ G+A        + C K   TA   PV  ++     D  G+ +   +R V L G+R+G  RP+     T   P  V LSASP 
Sbjct:  437 MDIYDRDELIRAVSLQGHGRAVDLAAQHSRMRIFVRREDNGG-ISVAISDTGQAEPGGCWRFWPCKKVGETADPSPVADTVIQNNDDFGGASAPAGSRTVWLGGVRIGRARPFPGRDGTFTYPAAVSLSASPT 568
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5199.12545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRT6_ECTSI1.280e-638.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5199contigH-paniculata_contig5199:711..3871 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5199.12545.1mRNA_H-paniculata_contig5199.12545.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5199 2..4735 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5199.12545.1 ID=prot_H-paniculata_contig5199.12545.1|Name=mRNA_H-paniculata_contig5199.12545.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=382bp
MDVYDRDTLIKAVTLPEQGAEDAPPSAMRMFVKKEETSNRINVIISEHGE
ASGWLSGMTFLCCKQTVTASSEPVLPSIAHRGTDARGSPSTRQVQLEGLR
VGMQRPWGPEGVTGCGPRRVCLSASPVSSAASSPTNVRTPNDPDPEAIAR
MNMARALLESESVSAALGSSSRTDNFDDSYSTQPSSTMRDSGRIRDISRY
GSGSRQVEGGGISYLGLRGSNRNSALRPTVNISIASGHTLPSHRGRSVGL
EITAISSTRGGEVLSPISSTPVAQTASGFASPSSDTVGLDTTVPDAPVTA
PDARPPPAGDEAAAGGGDAMLPSSESPTMASSPLPARQLVGGIDTMGPAV
FHSLRDPQSPPHNEAPGTRATPNGEMLHRSE*
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