prot_H-paniculata_contig51961.12540.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig51961.12540.1
Unique Nameprot_H-paniculata_contig51961.12540.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length109
Homology
BLAST of mRNA_H-paniculata_contig51961.12540.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 84.7 bits (208), Expect = 6.820e-17
Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    1 MQGLIDNGVWMQVERPNNKLVVSALMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHFQEASSTAPAAASTKMMLSLAAIQDWELRHVDFEQVYLHAPIDQEISSKFP 108
            ++ L DNG W  V+ P+N   V    +YK K+  DGKVE+YK RLVA G  QI+G  +QE  S        +M  +LAA Q+W L  +D    +L+  + +E+  + P
Sbjct:  180 LKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQETFSPVARQTIVRMFFALAAAQNWRLSQLDINNAFLNGELTEEVYMELP 287          
BLAST of mRNA_H-paniculata_contig51961.12540.1 vs. uniprot
Match: UPI0008494023 (uncharacterized mitochondrial protein AtMg00810 n=1 Tax=Theobroma cacao TaxID=3641 RepID=UPI0008494023)

HSP 1 Score: 83.6 bits (205), Expect = 1.390e-16
Identity = 40/108 (37.04%), Postives = 61/108 (56.48%), Query Frame = 0
Query:    1 MQGLIDNGVWMQVERPNNKLVVSALMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHFQEASSTAPAAASTKMMLSLAAIQDWELRHVDFEQVYLHAPIDQEISSKFP 108
            ++ L DNG W  V+ P+N   V    +YK K+  DGKVE+YK RLVA G  QI+G  +Q+  S      + +M  +LAA Q+W L  +D    +L+  + +E+  + P
Sbjct:    5 LKALEDNGTWSIVQLPSNCHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQKTFSPVVRQTTVRMFFALAATQNWRLSQLDINNAFLNGELTEEVYMELP 112          
BLAST of mRNA_H-paniculata_contig51961.12540.1 vs. uniprot
Match: A0A1U8Q9U1_NELNU (uncharacterized protein LOC109115353 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8Q9U1_NELNU)

HSP 1 Score: 83.6 bits (205), Expect = 1.710e-16
Identity = 40/108 (37.04%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    1 MQGLIDNGVWMQVERPNNKLVVSALMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHFQEASSTAPAAASTKMMLSLAAIQDWELRHVDFEQVYLHAPIDQEISSKFP 108
            M+ L DN  W  V  P  K +V    I+  K+G +GK+E+YK RLVA G  Q  G+ ++E  ++     S +++LS+AA  DWEL  +D    +L+  +D+E+  K P
Sbjct:  414 MKALNDNNTWEVVNMPEGKKLVGCKWIFMVKVGLEGKIERYKARLVAQGYTQTYGLDYEETFASVAKLNSIRVLLSMAANLDWELHQMDVSNAFLNGTLDEEVYMKLP 521          
BLAST of mRNA_H-paniculata_contig51961.12540.1 vs. uniprot
Match: A0A540MBJ7_MALBA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540MBJ7_MALBA)

HSP 1 Score: 81.6 bits (200), Expect = 2.510e-16
Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = 0
Query:    8 GVWMQVERPNNKLVVSALMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHFQEASSTAPAAASTKMMLSLAAIQDWELRHVDFEQVYLHAPIDQEISSKFP 108
            G W  V  P ++ V+ +  +YK K  +DGKV +YK RLVAHG  Q +G+ + E  S      + +++LSLAA++ WELR +D +  +LH  + +E+  K P
Sbjct:  166 GTWELVPPPVDRNVIGSKWVYKIKKDQDGKVSRYKARLVAHGYSQEQGLDYDETFSLVVRHTTVRLVLSLAAMKGWELRQLDVKNAFLHGELQEEVFMKQP 266          
BLAST of mRNA_H-paniculata_contig51961.12540.1 vs. uniprot
Match: A0A2Z6M6S6_TRISU (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6M6S6_TRISU)

HSP 1 Score: 81.3 bits (199), Expect = 1.170e-15
Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = 0
Query:    1 MQGLIDNGVWMQVERPNNKLVVSALMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHFQEASSTAPAAASTKMMLSLAAIQDWELRHVDFEQVYLHAPIDQEISSKFP 108
            M  L  +G W  V  P  K +V    +Y  K+G DGK++++K RLVA G  QI G+ + +  S     AS ++ LS+AAIQ W L  +D +  +LH  +++E+  + P
Sbjct:  711 MCALQSSGTWELVPLPPGKSLVGCRWVYTVKVGPDGKIDRFKARLVAKGYTQIFGLDYSDTFSPVAKMASVRLFLSIAAIQHWSLHQLDIKNAFLHGDLEEEVYMEQP 818          
BLAST of mRNA_H-paniculata_contig51961.12540.1 vs. uniprot
Match: A0A151T5R4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T5R4_CAJCA)

HSP 1 Score: 79.7 bits (195), Expect = 4.090e-15
Identity = 39/108 (36.11%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    1 MQGLIDNGVWMQVERPNNKLVVSALMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHFQEASSTAPAAASTKMMLSLAAIQDWELRHVDFEQVYLHAPIDQEISSKFP 108
            M  L +N  W  V+ P  K VV    I+  K+G DGK+++YK RLVA G  Q  GI ++E  +      S ++++SLAA  DW+L  +D +  +L+  +++E+  K P
Sbjct:  872 MAALEENKTWDIVKLPKEKKVVGCRWIFTTKMGADGKIDRYKARLVAQGYTQTHGIDYEETFAPVAKLNSIRILISLAANLDWKLHQLDVKNAFLNGKLEEEVYMKLP 979          
BLAST of mRNA_H-paniculata_contig51961.12540.1 vs. uniprot
Match: A0A151RM91_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RM91_CAJCA)

HSP 1 Score: 78.6 bits (192), Expect = 8.330e-15
Identity = 34/108 (31.48%), Postives = 61/108 (56.48%), Query Frame = 0
Query:    1 MQGLIDNGVWMQVERPNNKLVVSALMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHFQEASSTAPAAASTKMMLSLAAIQDWELRHVDFEQVYLHAPIDQEISSKFP 108
            ++ L  N  W     P++K  +  L +YK K   DG +E+YK  LVA G  Q++G+ F +  S      + +++L+LA++Q+W L+ +D   V+LH  + +E+  + P
Sbjct:   33 LRALEANNTWTLTTLPSHKTAIGCLWVYKIKFHADGSIERYKAHLVAKGYTQLEGLDFLDTFSPVAKLTTVRLLLALASLQNWHLKQLDVNNVFLHGDLHEEVYIQLP 140          
BLAST of mRNA_H-paniculata_contig51961.12540.1 vs. uniprot
Match: A0A7N2KRT0_QUELO (Integrase catalytic domain-containing protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2KRT0_QUELO)

HSP 1 Score: 78.6 bits (192), Expect = 1.040e-14
Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    1 MQGLIDNGVWMQVERPNNKLVVSALMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHFQEASSTAPAAASTKMMLSLAAIQDWELRHVDFEQVYLHAPIDQEISSKFP 108
            M+ L  N  W  V+ PN K VV    ++  K   DG VE+YK RLVA G  Q  GI ++E  +      S ++++SLAA QDW L  +D +  +LH  +++E+  + P
Sbjct:  867 MRALKKNDTWDYVDLPNGKRVVGCKWVFTIKHKADGSVERYKARLVAKGFTQTYGIDYKETFAPVAKMNSIRVLISLAANQDWPLHQLDVKNAFLHGDLEEEVYMELP 974          
BLAST of mRNA_H-paniculata_contig51961.12540.1 vs. uniprot
Match: A0A7N2N4W9_QUELO (Integrase catalytic domain-containing protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2N4W9_QUELO)

HSP 1 Score: 78.6 bits (192), Expect = 1.050e-14
Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    1 MQGLIDNGVWMQVERPNNKLVVSALMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHFQEASSTAPAAASTKMMLSLAAIQDWELRHVDFEQVYLHAPIDQEISSKFP 108
            M+ L  N  W  V+ PN K VV    ++  K   DG VE+YK RLVA G  Q  GI ++E  +      S ++++SLAA QDW L  +D +  +LH  +++E+  + P
Sbjct: 1438 MRALKKNDTWDYVDLPNGKRVVGCKWVFTIKHKADGSVERYKARLVAKGFTQTYGIDYKETFAPVAKMNSIRVLISLAANQDWPLHQLDVKNAFLHGDLEEEVYMELP 1545          
BLAST of mRNA_H-paniculata_contig51961.12540.1 vs. uniprot
Match: UPI0008FD5801 (uncharacterized protein LOC109116481 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI0008FD5801)

HSP 1 Score: 77.8 bits (190), Expect = 1.470e-14
Identity = 40/108 (37.04%), Postives = 57/108 (52.78%), Query Frame = 0
Query:    1 MQGLIDNGVWMQVERPNNKLVVSALMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHFQEASSTAPAAASTKMMLSLAAIQDWELRHVDFEQVYLHAPIDQEISSKFP 108
            +  L+ NG W  V  P  K  V    +YK K   DG VE+YK RLVA G  Q +G+ F +  S      + K++L+LAA Q+W L  +D    +LH  +++EI    P
Sbjct:    5 LDALVGNGTWSVVSLPPGKRAVGCKWVYKIKRKADGSVERYKARLVAKGFTQQEGVDFIDTFSPVAKLVTVKLLLALAAKQNWILTQMDVTNAFLHGDLEEEIYMSLP 112          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51961.12540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061F8M9_THECC6.820e-1737.96Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
UPI00084940231.390e-1637.04uncharacterized mitochondrial protein AtMg00810 n=... [more]
A0A1U8Q9U1_NELNU1.710e-1637.04uncharacterized protein LOC109115353 n=1 Tax=Nelum... [more]
A0A540MBJ7_MALBA2.510e-1638.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2Z6M6S6_TRISU1.170e-1536.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151T5R4_CAJCA4.090e-1536.11Retrovirus-related Pol polyprotein from transposon... [more]
A0A151RM91_CAJCA8.330e-1531.48Retrovirus-related Pol polyprotein from transposon... [more]
A0A7N2KRT0_QUELO1.040e-1437.04Integrase catalytic domain-containing protein n=1 ... [more]
A0A7N2N4W9_QUELO1.050e-1437.04Integrase catalytic domain-containing protein n=1 ... [more]
UPI0008FD58011.470e-1437.04uncharacterized protein LOC109116481 n=1 Tax=Taren... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..106
e-value: 5.8E-17
score: 62.2
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 4..103
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 4..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig51961contigH-paniculata_contig51961:828..1154 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig51961.12540.1mRNA_H-paniculata_contig51961.12540.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig51961 825..1154 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig51961.12540.1 ID=prot_H-paniculata_contig51961.12540.1|Name=mRNA_H-paniculata_contig51961.12540.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp
MQGLIDNGVWMQVERPNNKLVVSALMIYKRKIGEDGKVEKYKCRLVAHGN
RQIKGIHFQEASSTAPAAASTKMMLSLAAIQDWELRHVDFEQVYLHAPID
QEISSKFP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like