prot_H-paniculata_contig51943.12537.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig51943.12537.1
Unique Nameprot_H-paniculata_contig51943.12537.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length184
Homology
BLAST of mRNA_H-paniculata_contig51943.12537.1 vs. uniprot
Match: A0A151ITN2_9HYME (Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151ITN2_9HYME)

HSP 1 Score: 60.5 bits (145), Expect = 1.890e-7
Identity = 52/186 (27.96%), Postives = 80/186 (43.01%), Query Frame = 0
Query:    1 VYCGRCGKRGHDLYACPQVA-DEDACLTEAETKIELEEALKVDLGEDEFIAAYIASTSITGKEEVLSVDSEGLEYREVGGMEIWICDNGATKHMTHNSDFLFNYQE-RDGHVRLADGNRLPIEGVGMMLLHFRFYSEVVWMKLTQVAFIPLLSHHLLSLGKFADFGHEYRCSREGLRINLITGRVL 184
            + C  C K GH +  C +   DED  +   E         K    E    AA+ A        EV+  +   LE ++V     WI D+GA++HMTH S+++ N Q  +D HV L DG +  + G G + +      + +   L  V ++P L+ +L S+G  A     YR       + L     L
Sbjct:  227 IECFYCHKLGHYIKDCRKKRRDEDQGIRSKE---------KQKNNESNTEAAFSA--------EVIEKEILNLEVKDV-----WILDSGASRHMTHRSNWISNLQTYKDEHVSLGDGTKCKVHGRGTVYIQRLVDGQWLDGVLEDVLYVPDLNKNLFSVG--ACMNKNYRVVFTNNSVKLFLNNAL 388          
BLAST of mRNA_H-paniculata_contig51943.12537.1 vs. uniprot
Match: A0A6G0W5N4_9STRA (gag_pre-integrs domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W5N4_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.780e-7
Identity = 29/82 (35.37%), Postives = 45/82 (54.88%), Query Frame = 0
Query:   83 WICDNGATKHMTHNSDFLFNYQERDGHVRLADGNRLPIEGVGMMLLHFRFYSEVVWMKLTQVAFIPLLSHHLLSLGKFADFG 164
            WI D+GA  H   N+ +  N +  DG VR A+G  +PIEG G ++L     + +V + L  V +IP +  +L SL +  + G
Sbjct:  325 WILDSGACDHYCKNAAWFTNLRPHDGAVRAANGEDMPIEGCGTVVLEMNTTAGIVKVTLDDVWYIPTIQFNLFSLPRVTERG 406          
BLAST of mRNA_H-paniculata_contig51943.12537.1 vs. uniprot
Match: A0A5A7U112_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7U112_CUCME)

HSP 1 Score: 55.8 bits (133), Expect = 5.380e-6
Identity = 33/100 (33.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:   66 SVDSEGLEYREVGGMEIWICDNGATKHMTHNSDFLFNYQERDGH-VRLADGNRLPIEGVGMMLLHFRFYSEVVWMKLTQVAFIPLLSHHLLSLGKFADFG 164
            SV+   + +R++     WI D+G   HMTHN DFL N+Q+ D   V L D +   ++G G + +    +  ++ M LT V ++P L  +L+SL +    G
Sbjct:   53 SVEVLMVSHRDI--QNAWIMDSGCMYHMTHNRDFLINFQKSDREKVLLGDNSTYDVKGTGSVQI--ATHDRMIKM-LTNVRYVPELKRNLISLNELDKSG 147          
BLAST of mRNA_H-paniculata_contig51943.12537.1 vs. uniprot
Match: A0A4Y2QVG5_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2QVG5_ARAVE)

HSP 1 Score: 55.8 bits (133), Expect = 8.330e-6
Identity = 40/160 (25.00%), Postives = 70/160 (43.75%), Query Frame = 0
Query:    1 VYCGRCGKRGHDLYACPQ-VADEDACLTEAETKIELEEALKVDLGEDEFIAAYIASTSITGKEEVLSVDSEGLEYREVGGMEIWICDNGATKHMTHNSDFLFNYQ--ERDGHVRLADGNRLPIEGVGMMLLHFRFYSEVVWMKLTQVAFIPLLSHHLLSL 157
            + C  C K+GH + +CP+ +AD          K                   ++    +T    +L++  E     E      W  DNGA+KH+T+NS++  N++  E    V  A+G  LP  G G + +  +   E  + +L +V  +P +S +L S+
Sbjct:  242 ITCNYCYKKGHWVKSCPKWIADGRPPKPNQNDK-------------------FLRKDGVTANMSLLALHEEAFSSEE--SCYDWFVDNGASKHITNNSNYFTNFEVFESPHGVTAANGKILPAIGKGTLKIVTKVKGEKQFKELKEVWLVPGISKNLFSV 380          
BLAST of mRNA_H-paniculata_contig51943.12537.1 vs. uniprot
Match: A0A5D3DBV2_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3DBV2_CUCME)

HSP 1 Score: 54.3 bits (129), Expect = 1.080e-5
Identity = 30/97 (30.93%), Postives = 52/97 (53.61%), Query Frame = 0
Query:   81 EIWICDNGATKHMTHNSDFLFNYQERD-GHVRLADGNRLPIEGVGMMLLHFRFYSEVVWMKLTQVAFIPLLSHHLLSLGKFADFGHEYRCSREGLRI 176
            + WI D+  T HMTHN DFL N+Q+ D G + L D     ++G     +    + +++ + LT V ++P L  +L+SLG+    G   +   E +++
Sbjct:   54 DAWIMDSRCTFHMTHNLDFLINFQKSDRGTILLGDNGTCDVKGT--CSVQITTHDKMIRI-LTNVRYVPKLKCNLISLGELDRSGCTIKSENEVMKV 147          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51943.12537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A151ITN2_9HYME1.890e-727.96Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=... [more]
A0A6G0W5N4_9STRA4.780e-735.37gag_pre-integrs domain-containing protein n=2 Tax=... [more]
A0A5A7U112_CUCME5.380e-633.00Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2QVG5_ARAVE8.330e-625.00Retrovirus-related Pol polyprotein from transposon... [more]
A0A5D3DBV2_CUCME1.080e-530.93Retrovirus-related Pol polyprotein from transposon... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig51943contigH-paniculata_contig51943:237..788 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig51943.12537.1mRNA_H-paniculata_contig51943.12537.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig51943 237..788 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig51943.12537.1 ID=prot_H-paniculata_contig51943.12537.1|Name=mRNA_H-paniculata_contig51943.12537.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=184bp
VYCGRCGKRGHDLYACPQVADEDACLTEAETKIELEEALKVDLGEDEFIA
AYIASTSITGKEEVLSVDSEGLEYREVGGMEIWICDNGATKHMTHNSDFL
FNYQERDGHVRLADGNRLPIEGVGMMLLHFRFYSEVVWMKLTQVAFIPLL
SHHLLSLGKFADFGHEYRCSREGLRINLITGRVL
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