prot_H-paniculata_contig5194.12536.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5194.12536.1
Unique Nameprot_H-paniculata_contig5194.12536.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length929
Homology
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BLAST of mRNA_H-paniculata_contig5194.12536.1 vs. uniprot
Match: D7FZ63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ63_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 4.790e-19
Identity = 56/122 (45.90%), Postives = 74/122 (60.66%), Query Frame = 0 
Query:  666 LAQYLK-ADDRGWPWAGREVIWADYVTLNGHHRWVRSEGCRHAFLMVSDALYLLELPTDAVTRATQESRRSRRKAPAAAGSARGAAGFRNVVPFQPLGGRGWYLKVNASMLKFLTVPLSTDE 786
            L+ YL  A  RGWPW+G++++WA+YV+LNGHHRWVR+E CRHA L+V   LYLLELPT+AVTR   +   +         SARG+                WY+ +NA  L  L+VPL+  E
Sbjct:  213 LSSYLACARGRGWPWSGKDILWAEYVSLNGHHRWVRAEHCRHALLLVRGWLYLLELPTEAVTRHRTKGLTT---------SARGS----------------WYVGLNACDLSHLSVPLAPTE 309
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BLAST of mRNA_H-paniculata_contig5194.12536.1 vs. uniprot
Match: A0A6H5JWC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC9_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 2.710e-18
Identity = 56/122 (45.90%), Postives = 74/122 (60.66%), Query Frame = 0 
Query:  666 LAQYLK-ADDRGWPWAGREVIWADYVTLNGHHRWVRSEGCRHAFLMVSDALYLLELPTDAVTRATQESRRSRRKAPAAAGSARGAAGFRNVVPFQPLGGRGWYLKVNASMLKFLTVPLSTDE 786
            L+ YL  A  RGWPW+G++++WA+YV+LNGHHRWVR+E CRHA L+V   LYLLELPT+AVTR   +   +         SARG+                WY+ +NA  L  L+VPL+  E
Sbjct:  586 LSSYLACARGRGWPWSGKDILWAEYVSLNGHHRWVRAEHCRHALLLVRGWLYLLELPTEAVTRHQTKGLTT---------SARGS----------------WYVGLNACDLSHLSVPLAPTE 682
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5194.12536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZ63_ECTSI4.790e-1945.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWC9_9PHAE2.710e-1845.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5194contigH-paniculata_contig5194:6054..11933 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5194.12536.1mRNA_H-paniculata_contig5194.12536.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5194 5697..12173 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5194.12536.1 ID=prot_H-paniculata_contig5194.12536.1|Name=mRNA_H-paniculata_contig5194.12536.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=929bp
MSSEVSRSKSLRDLDSINLSKSFPVRPLGRPGNKKQSRLSYSGGRKQSMP
WSLLPRRGSNGGSGATNITTASSSSSSSSSSNNKINSEFPQTPKKSKSTT
SSKTFISPAHGRPSRGNSRTGTASHSPTPARRNRNHCANNSKINPTHHNS
TEPRVYAHGTASDGGGAAVVAYAKDGDVFLTVGAASKPLQFALAPASFSG
GDEIDQKKCVTEEGEAKGAVIHELLPRAGAERVDVLVQKLVKQGDVLAEV
NGQDVRDASFSKILALFGASEPRHSAKKKNTNDAVEPTVQSHNDHAATVA
TGTGSATSSTTTSTTSSPRSSVGGPFNAPPSPAERPRDTREFREPVVEPR
VPGAGGRRASSLRNFQAPAFANNFSAPLGVSDSNNNNNNTRLRMRARLGL
GGTAANSLSNSCPPSPSPGAASLSFTPRSSKLNWARLPPWGKGWGGGTPG
KSPRLGWGGAGWGTPGRSRSSTPARHRSSTFSGLAVSESATATGDADESI
PLAPPSPGGDCFPEISGPVGVIAPPSPGGDCLSDETGPVREAGMVVGSVK
VSAAPMTTLRLSAREDVTSGNKKKNRVGFALNQQESVAEEAEKKGFIRDK
ARKPGLDWLPDAPPGSDERGHSTNVDSTERRRSSTGGMGGSHDNAPVKVM
SEAERQKLSEAAARELAQYLKADDRGWPWAGREVIWADYVTLNGHHRWVR
SEGCRHAFLMVSDALYLLELPTDAVTRATQESRRSRRKAPAAAGSARGAA
GFRNVVPFQPLGGRGWYLKVNASMLKFLTVPLSTDELMDTKENADAIGDD
GGNNEMFKARSKTSISLAKNGGKVVKIAGKGVNVTVKEVKSGDGRFRGPL
RPGLILHGRGWACAWLECASVGERDSLVEVMKAWHTAVTQGAALKVDRLP
HAEASEKAKGGNGATMISMLMDRKTCAW*
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