prot_H-paniculata_contig51821.12518.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig51821.12518.1
Unique Nameprot_H-paniculata_contig51821.12518.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length106
Homology
BLAST of mRNA_H-paniculata_contig51821.12518.1 vs. uniprot
Match: A0A485L7G2_9STRA (Aste57867_16617 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7G2_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 8.110e-7
Identity = 31/85 (36.47%), Postives = 47/85 (55.29%), Query Frame = 0
Query:   21 EESWICDSGATGHATPSAANMSSYRQVKETLRIASGQVIPIVGRGNLNMTFRTSKGFVPLSVL--NVA-----HAPELHYNLFSL 98
            ++ WI DSGAT   TP+    S Y   K++LR+A G+++ ++G G L + F  S+   P  V   NV      H P+L +NL S+
Sbjct:  362 KDHWIIDSGATASTTPTRTFFSKYVPCKQSLRVADGKMLAVIGYGELCLRFNLSEPDPPAQVRKGNVLFTFGLHCPDLKFNLLSV 446          
BLAST of mRNA_H-paniculata_contig51821.12518.1 vs. uniprot
Match: A0A445M2Q0_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445M2Q0_GLYSO)

HSP 1 Score: 55.5 bits (132), Expect = 1.200e-6
Identity = 34/86 (39.53%), Postives = 54/86 (62.79%), Query Frame = 0
Query:   22 ESWICDSGATGHATPSAANMSSYRQVK-ETLRIASGQVIPIVGRGNLNMTFRTSKGFVPLSVLNVAHAPELHYNLFSLRKVADAGN 106
            +SWI DSGA+ H TPS   +S+Y   +   + +A G+ + IVGRG++N+  +TS G +  ++ NV H P L  NL S+ ++ D G+
Sbjct:  265 DSWIMDSGASFHTTPSKDLLSNYVSGRFGKVYLADGKSLDIVGRGDINI--KTSSGSL-WTLHNVRHIPALKRNLISIGQLDDEGH 347          
BLAST of mRNA_H-paniculata_contig51821.12518.1 vs. uniprot
Match: A0A445M280_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Glycine soja TaxID=3848 RepID=A0A445M280_GLYSO)

HSP 1 Score: 55.5 bits (132), Expect = 1.210e-6
Identity = 34/86 (39.53%), Postives = 54/86 (62.79%), Query Frame = 0
Query:   22 ESWICDSGATGHATPSAANMSSYRQVK-ETLRIASGQVIPIVGRGNLNMTFRTSKGFVPLSVLNVAHAPELHYNLFSLRKVADAGN 106
            +SWI DSGA+ H TPS   +S+Y   +   + +A G+ + IVGRG++N+  +TS G +  ++ NV H P L  NL S+ ++ D G+
Sbjct: 1161 DSWIMDSGASFHTTPSKDLLSNYVSGRFGKVYLADGKSLDIVGRGDINI--KTSSGSL-WTLHNVRHIPALKRNLISIGQLDDEGH 1243          
BLAST of mRNA_H-paniculata_contig51821.12518.1 vs. uniprot
Match: H3H469_PHYRM (Retrotran_gag_3 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H469_PHYRM)

HSP 1 Score: 53.1 bits (126), Expect = 7.240e-6
Identity = 29/85 (34.12%), Postives = 48/85 (56.47%), Query Frame = 0
Query:   21 EESWICDSGATGHATPSAANMSSYRQV-KETLRIASGQVIPIVGRGNLNMTFRTSKGFVPL-SVLNVAHAPELHYNLFSLRKVAD 103
            + +W  DSG T + T S       + +  +T+ +     IPI+G+G +NMT   +KG   + S+ +V +APEL +NL S+R+  D
Sbjct:  378 DPAWTIDSGCTRYVTSSPHWFEDLKPIIGKTITVGGNHQIPILGKGTVNMTVTDTKGSKRIISLSDVLYAPELKFNLLSVRQAVD 462          
BLAST of mRNA_H-paniculata_contig51821.12518.1 vs. uniprot
Match: A0A151QVU7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QVU7_CAJCA)

HSP 1 Score: 51.2 bits (121), Expect = 3.410e-5
Identity = 33/86 (38.37%), Postives = 51/86 (59.30%), Query Frame = 0
Query:   22 ESWICDSGATGHATPSAANMSSYRQVK-ETLRIASGQVIPIVGRGNLNMTFRTSKGFVPLSVLNVAHAPELHYNLFSLRKVADAGN 106
            ESWI DSGA+ H TPS   +++Y   +   + +A G+ + IVG+G++    RTS G    ++ NV H P L  NL S+ ++ D G+
Sbjct:  288 ESWIMDSGASFHTTPSNELLTNYVSGRFGKVYLADGKPLNIVGKGDI--AIRTSSGS-HWTLKNVRHIPALKRNLISVGQLDDEGH 370          
BLAST of mRNA_H-paniculata_contig51821.12518.1 vs. uniprot
Match: A0A151TNK0_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TNK0_CAJCA)

HSP 1 Score: 51.2 bits (121), Expect = 3.660e-5
Identity = 33/86 (38.37%), Postives = 51/86 (59.30%), Query Frame = 0
Query:   22 ESWICDSGATGHATPSAANMSSYRQVK-ETLRIASGQVIPIVGRGNLNMTFRTSKGFVPLSVLNVAHAPELHYNLFSLRKVADAGN 106
            ESWI DSGA+ H TPS   +++Y   +   + +A G+ + IVG+G++    RTS G    ++ NV H P L  NL S+ ++ D G+
Sbjct:  266 ESWIMDSGASFHTTPSNELLTNYVSGRFGKVYLADGKPLNIVGKGDI--AIRTSSGS-HWTLKNVRHIPALKRNLISVGQLDDEGH 348          
BLAST of mRNA_H-paniculata_contig51821.12518.1 vs. uniprot
Match: H3H3S0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H3S0_PHYRM)

HSP 1 Score: 50.4 bits (119), Expect = 6.280e-5
Identity = 29/92 (31.52%), Postives = 51/92 (55.43%), Query Frame = 0
Query:   17 VGVEEESWICDSGATGHATPSAANMSSYRQVKET----LRIASGQVIPIVGRGNLNMTFRTSKGFVP-LSVLNVAHAPELHYNLFSLRKVAD 103
            VG  + SW  DSG T H T   +N   +  +K T    + +     IPI G G++ ++ + +KG    ++++NV +AP+L +NL S+R+  +
Sbjct:  303 VGHHDPSWTIDSGCTRHVT---SNREWFVTLKPTAGKSITVGGNHQIPIAGTGDVKLSIKDTKGRDRVITLINVLYAPDLKFNLLSVRQAVE 391          
BLAST of mRNA_H-paniculata_contig51821.12518.1 vs. uniprot
Match: H3GXI1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GXI1_PHYRM)

HSP 1 Score: 50.4 bits (119), Expect = 6.470e-5
Identity = 29/92 (31.52%), Postives = 51/92 (55.43%), Query Frame = 0
Query:   17 VGVEEESWICDSGATGHATPSAANMSSYRQVKET----LRIASGQVIPIVGRGNLNMTFRTSKGFVP-LSVLNVAHAPELHYNLFSLRKVAD 103
            VG  + SW  DSG T H T   +N   +  +K T    + +     IPI G G++ ++ + +KG    ++++NV +AP+L +NL S+R+  +
Sbjct:  431 VGHHDPSWTIDSGCTRHVT---SNREWFVTLKPTAGKSITVGGNHQIPIAGTGDVKLSIKDTKGRDRVITLINVLYAPDLKFNLLSVRQAVE 519          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51821.12518.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A485L7G2_9STRA8.110e-736.47Aste57867_16617 protein n=1 Tax=Aphanomyces stella... [more]
A0A445M2Q0_GLYSO1.200e-639.53Retrovirus-related Pol polyprotein from transposon... [more]
A0A445M280_GLYSO1.210e-639.53Retrovirus-related Pol polyprotein from transposon... [more]
H3H469_PHYRM7.240e-634.12Retrotran_gag_3 domain-containing protein n=1 Tax=... [more]
A0A151QVU7_CAJCA3.410e-538.37Retrovirus-related Pol polyprotein from transposon... [more]
A0A151TNK0_CAJCA3.660e-538.37Retrovirus-related Pol polyprotein from transposon... [more]
H3H3S0_PHYRM6.280e-531.52Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
H3GXI1_PHYRM6.470e-531.52Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig51821contigH-paniculata_contig51821:250..567 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig51821.12518.1mRNA_H-paniculata_contig51821.12518.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig51821 250..567 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig51821.12518.1 ID=prot_H-paniculata_contig51821.12518.1|Name=mRNA_H-paniculata_contig51821.12518.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=106bp
GECGLFIHVGKSGELGVGVEEESWICDSGATGHATPSAANMSSYRQVKET
LRIASGQVIPIVGRGNLNMTFRTSKGFVPLSVLNVAHAPELHYNLFSLRK
VADAGN
back to top