prot_H-paniculata_contig51810.12517.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig51810.12517.1
Unique Nameprot_H-paniculata_contig51810.12517.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length67
Homology
BLAST of mRNA_H-paniculata_contig51810.12517.1 vs. uniprot
Match: D7G4C2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4C2_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 3.890e-27
Identity = 49/67 (73.13%), Postives = 58/67 (86.57%), Query Frame = 0
Query:    1 MALCACCSSTFNNGFWGLKSLLWTVGLIACIFLSNNIFDTDGYVWVARVGAFIFIIMQQIVLIDLAY 67
            MALCACCS  FN+GFWG K +LW V +IA +F++N++FDT GYVWVAR+GAFIF IMQQIVLIDLAY
Sbjct:  111 MALCACCSPVFNHGFWGFKFMLWAVLMIATLFITNDVFDTSGYVWVARIGAFIFTIMQQIVLIDLAY 177          
BLAST of mRNA_H-paniculata_contig51810.12517.1 vs. uniprot
Match: A0A836CG76_9STRA (Serine incorporator/TMS membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG76_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.040e-16
Identity = 37/59 (62.71%), Postives = 45/59 (76.27%), Query Frame = 0
Query:    9 STFNNGFWGLKSLLWTVGLIACIFLSNNIFDTDGYVWVARVGAFIFIIMQQIVLIDLAY 67
            S FNN  W LK   W+V +IA +F+SN +FD  GYVW AR GAF+FII+QQIVLID+AY
Sbjct:  117 SLFNNRCWALKLTFWSVMIIASVFISNAVFDDHGYVWAARFGAFLFIILQQIVLIDIAY 175          
BLAST of mRNA_H-paniculata_contig51810.12517.1 vs. uniprot
Match: A0A6S8BNU5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8BNU5_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.040e-10
Identity = 30/56 (53.57%), Postives = 41/56 (73.21%), Query Frame = 0
Query:   12 NNGFWGLKSLLWTVGLIACIFLSNNIFDTDGYVWVARVGAFIFIIMQQIVLIDLAY 67
            ++ FWG K   W + L+   FL N IF   GY+WVAR+G+F+F+I+QQI+LIDLAY
Sbjct:  111 HDSFWGCKFWGWILALVVAWFLPNPIFF--GYIWVARIGSFLFVILQQILLIDLAY 164          
BLAST of mRNA_H-paniculata_contig51810.12517.1 vs. uniprot
Match: A0A8J2WJ15_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WJ15_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 2.380e-9
Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 0
Query:   10 TFNNGFWGLKSLLWTVGLIACIFLSNNIFDTDGYVWVARVGAFIFIIMQQIVLIDLAY 67
            +F++  W  K   W + L   + + N +F  +GYVWVAR G FIF+I+QQI+LIDLAY
Sbjct:  110 SFHDRRWVAKLFGWILLLCISLLIPNPVFGLEGYVWVARFGGFIFVILQQILLIDLAY 167          
BLAST of mRNA_H-paniculata_contig51810.12517.1 vs. uniprot
Match: A0A7S2S0K9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0K9_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 3.890e-9
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 0
Query:   16 WGLKSLLWTVGLIACIFLSNNIFDTDGYVWVARVGAFIFIIMQQIVLIDLAY 67
            W +K   W   +   IF  N +FD  GYVW AR+GAF F+I+QQI+L+D AY
Sbjct:  178 WDIKFFAWLGIVTLFIFAPNRVFDDHGYVWPARIGAFAFLILQQIILVDFAY 229          
BLAST of mRNA_H-paniculata_contig51810.12517.1 vs. uniprot
Match: A0A7S2RGK7_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGK7_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 4.440e-9
Identity = 28/52 (53.85%), Postives = 39/52 (75.00%), Query Frame = 0
Query:   16 WGLKSLLWTVGLIACIFLSNNIFDTDGYVWVARVGAFIFIIMQQIVLIDLAY 67
            W LK +++ + L+A ++  + IFD  GYVW ARV AFIF+I+QQI+LID AY
Sbjct:  129 WDLKFIVFMLVLLALMWAPSTIFDEHGYVWFARVFAFIFLILQQIILIDFAY 180          
BLAST of mRNA_H-paniculata_contig51810.12517.1 vs. uniprot
Match: A0A7S2HQ00_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQ00_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.530e-8
Identity = 24/52 (46.15%), Postives = 37/52 (71.15%), Query Frame = 0
Query:   16 WGLKSLLWTVGLIACIFLSNNIFDTDGYVWVARVGAFIFIIMQQIVLIDLAY 67
            W LKS  W +  +  +FL N++  T G++W ARVGAF+F+++QQ++LID  Y
Sbjct:   84 WCLKSTFWFLLCVGSVFLPNDVM-TSGFIWFARVGAFVFLVLQQVILIDFGY 134          
BLAST of mRNA_H-paniculata_contig51810.12517.1 vs. uniprot
Match: A0A7S2FS67_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FS67_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.140e-8
Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    1 MALCACCSSTFNNGFWGLKSLLWTVGLIACIFLSNNIFDTDGYVWVARVGAFIFIIMQQIVLIDLAY 67
            MA+ A      ++  W +K   + + LI   +  +NIFD  GY W ARVGAFIFI++QQI+L+D  Y
Sbjct:  186 MAILAGFKPAIHDLGWDVKLSFYAILLIGITWAPSNIFDDHGYAWFARVGAFIFIVLQQIILLDGGY 252          
BLAST of mRNA_H-paniculata_contig51810.12517.1 vs. uniprot
Match: A0A7S0G8L6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G8L6_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 2.140e-8
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
Query:    1 MALCACCSSTFNNGFWGLKSLLWTVGLIACIFLSNNIFDTDGYVWVARVGAFIFIIMQQIVLIDLAY 67
            ++L A C+ +FN   W  K +L++  +   IF+ N     D YV  AR+GA IFI++QQIVLIDLAY
Sbjct:  130 LSLIAMCNPSFNRKSWPAKYILYSCLVFLSIFVPNRPLFLDIYVPFARIGASIFIVIQQIVLIDLAY 196          
BLAST of mRNA_H-paniculata_contig51810.12517.1 vs. uniprot
Match: A0A6V1QGS0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QGS0_HETAK)

HSP 1 Score: 56.6 bits (135), Expect = 1.020e-7
Identity = 25/58 (43.10%), Postives = 41/58 (70.69%), Query Frame = 0
Query:   10 TFNNGFWGLKSLLWTVGLIACIFLSNNIFDTDGYVWVARVGAFIFIIMQQIVLIDLAY 67
            +F N   G K+++    ++ACIF+ N +F+ + + WVAR+  F +I++QQ+VLIDLAY
Sbjct:  141 SFYNEQMGSKAIIIVFLMVACIFIPNYVFNLNFFAWVARLCGFAYIVVQQLVLIDLAY 198          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51810.12517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7G4C2_ECTSI3.890e-2773.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CG76_9STRA1.040e-1662.71Serine incorporator/TMS membrane protein n=1 Tax=T... [more]
A0A6S8BNU5_9STRA1.040e-1053.57Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A8J2WJ15_9STRA2.380e-948.28Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2S0K9_9STRA3.890e-950.00Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2RGK7_9STRA4.440e-953.85Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S2HQ00_9STRA1.530e-846.15Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2FS67_9STRA2.140e-843.28Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0G8L6_9STRA2.140e-846.27Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A6V1QGS0_HETAK1.020e-743.10Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005016Serine incorporator/TMS membrane proteinPFAMPF03348Serinccoord: 8..67
e-value: 8.2E-15
score: 54.6
IPR005016Serine incorporator/TMS membrane proteinPANTHERPTHR10383SERINE INCORPORATORcoord: 9..67
IPR029559Membrane protein Tms1-likePANTHERPTHR10383:SF9SERINE INCORPORATOR 3coord: 9..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..67
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 44..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig51810contigH-paniculata_contig51810:683..883 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig51810.12517.1mRNA_H-paniculata_contig51810.12517.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig51810 683..898 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig51810.12517.1 ID=prot_H-paniculata_contig51810.12517.1|Name=mRNA_H-paniculata_contig51810.12517.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=67bp
MALCACCSSTFNNGFWGLKSLLWTVGLIACIFLSNNIFDTDGYVWVARVG
AFIFIIMQQIVLIDLAY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005016TDE1/TMS
IPR029559Tms1-like