prot_H-paniculata_contig5178.12513.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5178.12513.1
Unique Nameprot_H-paniculata_contig5178.12513.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length372
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5178.12513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 312..322
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..291
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 323..341
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 347..365
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 292..311
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 366..371
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 342..346
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.723
NoneNo IPR availableTMHMMTMhelixcoord: 292..310
NoneNo IPR availableTMHMMTMhelixcoord: 319..341
NoneNo IPR availableTMHMMTMhelixcoord: 346..365

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5178contigH-paniculata_contig5178:2911..7086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5178.12513.1mRNA_H-paniculata_contig5178.12513.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5178 763..10891 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5178.12513.1 ID=prot_H-paniculata_contig5178.12513.1|Name=mRNA_H-paniculata_contig5178.12513.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=372bp
MSVPGWQAMRIMLLLASTLSYFAEGALPPYPMSDEELKEMGGYYDGDGKY
LGGIAKINVGSPSYDKCTLFLPRDEVILSESSTETTESIPDDAKIICWEW
NQDQNANIADGDVIDNCWCYKPAVGNRYCEKWTCNRVQINNVAYCTNDAT
RRLLGTPEDEGFHADGDEYVRLQDDENTHGNLRHLQVGGGCSSEIAAGST
KCRCDIDERDLEYCPTWSCETYIGATKFETFTCYQPGANGLYCESWTGVI
EESERKSVEACRCATKTGGDNAICGFAECVERSISKCKVCNLGLSIGLWS
VLGILGILMLMQRCFGKDYFSPCVLFAIIWIAGAGAGVALYGGQDGGMYG
GIMWVVAIVCFFCCCRPPKET*
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