prot_H-paniculata_contig5153.12476.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5153.12476.1
Unique Nameprot_H-paniculata_contig5153.12476.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length2434
Homology
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BLAST of mRNA_H-paniculata_contig5153.12476.1 vs. uniprot
Match: D7FZ15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ15_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 9.300e-16
Identity = 48/85 (56.47%), Postives = 59/85 (69.41%), Query Frame = 0 
Query:  478 PAVVNVDNA-FWCPPFKVVDGLPPYNRGYTRDFQKKYRSGLIFSVQNAIPVPCIVPATLAPAGVGGWDPLVLGLPK--RRARKKK 559
            PA    +NA FWCPPFK+V GLPPYNRGY   FQ+ YR GLIF    AIP P +VP TLAPAG GGW+   + +P+  ++AR+ K
Sbjct: 1632 PAERGGENAGFWCPPFKLVQGLPPYNRGYNLIFQRAYRGGLIFDTPGAIPKPTVVPHTLAPAGGGGWN-TGIDIPRVSKKARRDK 1715
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BLAST of mRNA_H-paniculata_contig5153.12476.1 vs. uniprot
Match: A0A6H5KQ85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ85_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 1.610e-15
Identity = 48/85 (56.47%), Postives = 59/85 (69.41%), Query Frame = 0 
Query:  478 PAVVNVDNA-FWCPPFKVVDGLPPYNRGYTRDFQKKYRSGLIFSVQNAIPVPCIVPATLAPAGVGGWDPLVLGLPK--RRARKKK 559
            PA    +NA FWCPPFK+V GLPPYNR Y   FQ+ YRSGLIF    AIP P +VP TLAPAG GGW+   + +P+  ++AR+ K
Sbjct: 1867 PAERGGENAGFWCPPFKLVQGLPPYNRSYNLIFQRAYRSGLIFDTPGAIPKPTVVPHTLAPAGGGGWN-TGIDIPRVAKKARRDK 1950
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5153.12476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZ15_ECTSI9.300e-1656.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQ85_9PHAE1.610e-1556.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5153contigH-paniculata_contig5153:2202..14301 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5153.12476.1mRNA_H-paniculata_contig5153.12476.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5153 1292..14344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5153.12476.1 ID=prot_H-paniculata_contig5153.12476.1|Name=mRNA_H-paniculata_contig5153.12476.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=2434bp
MKNAMNPPSSLPRTVRNGSRKVMGNAPRSLAVVEAAETRVGVDDGGRARK
SSRTMRGRTSSSWDDAVEGEGDVGSGVDGDASSASHDTLNRPGLRRRGGG
KSSPLPSSSSSSDIVEHAPSSASSLSSSTDKSTKTKKNDGKVAKVVSRGK
VSASAGISTSRPVDSSSQHRRKRCGGSSASSKESARQQQAQGEAQDPWTD
EMLSELYSITSSSTPSLSASTSLQDGYHNALTCPACTAGAELTPSTLSGA
HGRVGTLSSFATASFSSASRTSSARGGGGGGGGGENGGASSGDSSRPTLL
SRSNSQDASHRGAPTLQGNGAAGAAVGRSSISLDADGPGASSSSPSSWSS
RGRASSVLGENVIGAAAAPADVCGASTDPNGTDAPPNKPASRANTTVSSS
SRISIAANDSLSTATTSSGSVTSTSGGGAGSWAADPPSQDRRSDAASASA
SSGADGAAAEVGVSPRGGCTAEQGVEGPAVVNVDNAFWCPPFKVVDGLPP
YNRGYTRDFQKKYRSGLIFSVQNAIPVPCIVPATLAPAGVGGWDPLVLGL
PKRRARKKKNTGGVGSGGGDADSVPSKATSESAHALASSPTGPGYATYQS
LHDDSIPILEPLPLSSSVKPTLDPPPPPQQHDEDGDLAGLAQGFSSTASM
PAVTNRDGRKKKRSGTKRGQTSGQQREEKKGGGAPKEAGEAGVDTAGAEE
SLTDNADIAREHPAPGEGAAVDCSDIAGAVMSEGSGEAHCDEAVGGGDVG
GGGLEGRSGEVRRKNSVLHARAGSSVGRVGSNENKRKGKDRVGGSKRERT
KDKQPFGGTSAASSSAALPSPLSPSTAAAASASPEAATVHNPPIPSPDSP
SPELRGDAASSGRRQRNADATAVPSDSSMSSDGWSVEDAVTMAEGNPEQT
KKKKGAVLRKDAESATGITSRDGPDRGEQDGRGKEHESMSEEKPATESTA
SPRAVPSRSRRQRGTESARDCGGGRSGTSSSNSSGPSTAGGPAKALDKAN
PHKQDVSEEGDNGGSRSGASGAPDSKALPDSLLSDSGCASDLLEGSSSAE
MGLASDQHSEGKIRQKIAGIQEAIEKAKVVCSEADVVVNEHSSSSSLSLD
SAMSPDNSVSPPSSSPPLPSYESETLRHDQATALTTATAEEGVEEDEASD
SLLPQKQTTASGRGEEQRKKSNKRPRSGDDNKSASRATTDDKVRHNSPGS
PVQPPLPQLASHFSPAKSPPSKWRGKVKPGTTRGSAGESSAAVGRRVEPS
ATPSGSGSYIGAGGGGDSCTGGGFDLSLASDDDDGDGDDGGIAVGLAGAL
SGGGGGGGSGVESGVGAGGDASTSGGVSGSGGGSSSSNPPKKKFKKMAVG
KEGDASQKKKSGGKGEGTVGGGSRSGVKSGAGTGGDANEYHGVSGGSGSS
PRKKKRKATTTGNEGGAALKKVAVREEDTTVGCGRWSAVESGAGTGGGAS
GSGGVGGGSVSSPWKKKRKTKTTKADGGAAHKKARGKGENTADSGRGSGV
ESGAGAGGDANQGGEVGGGSNSSPGKKKRKTTTVTMTGKDGGAAKKKARG
KGEDNVDRGSRSGVESRSGTGEDVSGSGEIRRGSSSSTEKKKRKTTTEKD
GGITQKKARGTAEDAVDGGSGSGGEFGAGAGGDASGSGKVGGGSSPGTKK
RKTTVMTEKGGSTAQKKARGKAKGTVDGGSGSGVESGAGAGGDESGIGGV
GGGSGSSPGTKKRKTTVMAEKGGGAAQKKARGKADDTVDGGSGSGGVGGG
SGSSPEMKKRKTTTVMAEKDGGAAQKKARGKAGDTVDGGSGSGVESGAGA
GGDASRSSSSNDLGKKKRKTPEREDRYPGPKKARGKAEGTVDGGSGSGVE
SGAGASGDPVGDGGLLGGSSSSSNPGKKKRKTTTEKDGGAAYKNAKRKGE
DSAPSDGSRKAKRQGENAGKSAEGKGKEQGAGSVEVGVNGVHDGARMPTK
RGEGDSAAKTNKVVTGVDGAAARKGGKVVTKKRTSLSSPLPSAPAASNVA
PGVGVVTAGMSDGVMRDKGKGINKQSQPEQQQQQNKRTKNGKDPVAWVSA
SVGAVATSPTLFLPRQPPTATATKQSSAARSPPAGKAISTSKLSSSCTFK
SHSSSAPRKLSSFKTAVIGSPSKMPTKLSSTTAKSTPAAKRPASSATSPL
PSAPTPPPQSSKESPSTSCLKPPRSSLPPLPPPSQFAGPPSPPPVASRQA
RTRASSVGEHSNGIANVGAGGDRGSDMAWFEGVHEVSTLSSSKASLRGDC
TSPTGVVDTFSGKNDGGGDGSGGVGGEGVEGAKRRLDGRPIRQAKRHFYG
DNDSDDDNDDAEGKRNHVNQNGFSSPAGSGEGGGAGSTPTVTPHEQGLSF
AGTDSLSASSSKKKRMRPPEHGLEEGQSHGKRPLENGGNSGGGGCGSVNP
KRKRMAVASVVERGVGGCSDAHRRYTKQEERQQ*
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