prot_H-paniculata_contig50927.12381.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig50927.12381.1
Unique Nameprot_H-paniculata_contig50927.12381.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length194
Homology
BLAST of mRNA_H-paniculata_contig50927.12381.1 vs. uniprot
Match: A0A6H5KC00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC00_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 5.450e-23
Identity = 67/196 (34.18%), Postives = 100/196 (51.02%), Query Frame = 0
Query:    4 GDGQAAWNALVDKYNCQTTEAKKACHEKLVSTRMEPGQDPDDFFFFLDECRQTLEDMGQMVHDKRYEVIVLQDLHAE--YERVRITSFEKRDFGLDDIRYMVHAMYVHNLSRSSNFKPVAGRDIAMQAAGYNRSNVQCNYCKGVGHVIQDCAVLKAKEL-RQKAVVGHVRQGRDG--KQKWCSFHKATTHSDEECR 194
            GDG AAW AL ++++ QT EA++ACH +L + R   G DP DFF    + +  L+ +G+ V D  Y  I+L  L     +E +R   +      +D ++   +  +V   SR+++   V+GR  AM  A       QC  CK  GH  +DC     K   +Q    G  ++G  G  + KWCS+H   THSD EC+
Sbjct:   90 GDGTAAWRALNERFDAQTQEARRACHNELFNLRHLAGGDPIDFFTKGWDLKLRLKVLGEEVSDLVYLDIMLSGLTKAPVFEFIREMHYRDNFTSVDSLQATANCFFVDQHSRNASGPVVSGRGAAMAVAS---DTDQCRRCKAYGHFQRDCPQQVQKSRPKQSKKKGANKRGSGGSVQPKWCSYHNTKTHSDAECQ 282          
BLAST of mRNA_H-paniculata_contig50927.12381.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 6.430e-22
Identity = 67/194 (34.54%), Postives = 100/194 (51.55%), Query Frame = 0
Query:    4 GDGQAAWNALVDKYNCQTTEAKKACHEKLVSTRMEPGQDPDDFFFFLDECRQTLEDMGQMVHDKRYEVIVLQDLHAEYERVRITSFEKRD--FGLDDIRYMVHAMYVHNLSRSSNFKPVAGRDIAMQAAGYNRSNVQCNYCKGVGHVIQDCAVL--KAKELRQKAVVGHVRQGRDGKQKWCSFHKATTHSDEEC 193
            GDG AAW A  ++++ QT EA++ACH +L + R   G DP DFF    + +  L  +G+ V    Y  I+L  L    E   I     RD    +D ++   + ++V   SR+++   V+GR  AM AA    S+ QC+ CK  G   +DC     K++  + K      + G   + KWC++HK TTHSD EC
Sbjct:  110 GDGTAAWRAQHERFDAQTQEARRACHNELFNLRHLAGNDPIDFFTKGWDLKLRLMVLGEEVSSPVYLDIMLSGLTKAPEFTFIREMHYRDNIASVDSLQATANRIFVDQQSRNASGPMVSGRGAAMAAAS---SSDQCHRCKEYGPFQRDCPKQGQKSRSNQAKRNGKSKKGGGSAQPKWCAYHKPTTHSDAEC 300          
BLAST of mRNA_H-paniculata_contig50927.12381.1 vs. uniprot
Match: A0A6H5L4Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y1_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 1.820e-16
Identity = 51/159 (32.08%), Postives = 77/159 (48.43%), Query Frame = 0
Query:   37 MEPGQDPDDFFFFLDECRQTLEDMGQMVHDKRYEVIVLQDLHAEYERVRITSFEKRDFGLDDIRYMVHAMYVHNLSRSSNFKPVAGRDIAMQAAGYNRSNVQCNYCKGVGHVIQDCAVLKAKELRQKAVVGHVRQGRD--GKQKWCSFHKATTHSDEEC 193
            MEPG +PDDFF+     R  LE MG+ + D+R++ I +Q    +Y+ +++  F    F +  ++  +  +++    R      +AGR  AM       S   C  C   GHV ++C   + K        GH+ +     G  KWCS H  TTHSDEEC
Sbjct:    1 MEPGDNPDDFFYKQHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGCAMAT---KTSGPICFECNEPGHVRRNCPNRQRK--------GHMPKKTKPAGANKWCSVHNTTTHSDEEC 148          
BLAST of mRNA_H-paniculata_contig50927.12381.1 vs. uniprot
Match: A0A6H5K626_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K626_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 2.340e-8
Identity = 39/119 (32.77%), Postives = 65/119 (54.62%), Query Frame = 0
Query:    5 DGQAAWNALVDKYNCQTTEAKKACHEKLVSTRMEPGQDPDDFFFFLDECRQTLEDMGQMVHDKRYEVIVLQDLHA--EYERVRITSFEKRDFGLDDIRYMVHAMYVHNLSRSSNFKPVA 121
            DG AAW AL ++++ QT EA++ACH +L + R   G DP DFF    + +  L+ +G+ V D  Y  I+L  L    E++ +R   +      +D ++   +  +V   SR+++  PVA
Sbjct:  102 DGTAAWRALNERFDAQTQEARRACHNELFNLRHLAGGDPIDFFTKGWDLKLRLKVLGEEVSDPVYMDIMLSGLTKAPEFKFIREMHYRDNFTSVDSLQATANRFFVDQQSRNAS-GPVA 219          
BLAST of mRNA_H-paniculata_contig50927.12381.1 vs. uniprot
Match: A0A6H5JKW9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW9_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.230e-6
Identity = 31/74 (41.89%), Postives = 44/74 (59.46%), Query Frame = 0
Query:    4 GDGQAAWNALVDKYNCQTTEAKKACHEKLVSTRMEPGQDPDDFFFFLDECRQTLEDMGQMVHDKRYEVIVLQDL 77
            GDG AAW AL D+++ QT EA++ACH +L + R   G DP DFF    + +  L+ +G+   D  Y  I+L  L
Sbjct:   83 GDGTAAWRALNDRFDAQTQEARRACHNELFNLRHLAGGDPIDFFTKGWDLKLRLKVLGEEASDPVYLDIMLSGL 156          
BLAST of mRNA_H-paniculata_contig50927.12381.1 vs. uniprot
Match: A0A6H5JC75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC75_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.680e-6
Identity = 53/197 (26.90%), Postives = 75/197 (38.07%), Query Frame = 0
Query:    4 GDGQAAWNALVDKYNCQTTEAKKACHEKLVSTRMEPGQDPDDFFFFLDECRQTLEDMGQMVHD---KRYEVIVLQDLHAEYERVRITSFEKRDFGLDDIRYMVHAMYVHNLSRSSNFKPVAGRDIAMQAAGYNRSNVQCNYCKGVGHVIQDCAVLKAKEL-RQKAVVGHVRQGRDG--KQKWCSFHKATTHSDEECR 194
            GDG AAW AL ++++ QT EA++ACH +L + R   G             R     +G    D                                        +   V   SR+++   V+GR +AM  A       QC  CK  GH  +DC     K   RQ    G  ++G  G  + KWCS+    THS+ EC+
Sbjct:  101 GDGTAAWRALNERFDAQTQEARRACHNELFNLRHLAGV----------AQRVGPRGLGPGGCDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRFVVDQQSRNASGPVVSGRGVAMGVAS---DTDQCRRCKAHGHFQRDCPQQVQKSRPRQGKKKGPNKRGSGGSAQPKWCSYSNTKTHSNAECQ 284          
BLAST of mRNA_H-paniculata_contig50927.12381.1 vs. uniprot
Match: A0A6H5KRA6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRA6_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 3.090e-6
Identity = 26/59 (44.07%), Postives = 38/59 (64.41%), Query Frame = 0
Query:    4 GDGQAAWNALVDKYNCQTTEAKKACHEKLVSTRMEPGQDPDDFFFFLDECRQTLEDMGQ 62
            G+G  AWNAL D+++ QT EA++ACH +L + R  PG DP DFF    + +  L  +G+
Sbjct:  184 GNGAEAWNALNDRFDAQTQEARRACHNELFNLRHLPGGDPIDFFTKSWDLKLRLRGLGE 242          
BLAST of mRNA_H-paniculata_contig50927.12381.1 vs. uniprot
Match: A0A6H5JWN9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWN9_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 1.700e-5
Identity = 30/74 (40.54%), Postives = 44/74 (59.46%), Query Frame = 0
Query:    4 GDGQAAWNALVDKYNCQTTEAKKACHEKLVSTRMEPGQDPDDFFFFLDECRQTLEDMGQMVHDKRYEVIVLQDL 77
            GD  AAW AL ++++ QT EA++ACH +L + R   G DP DFF    + +  L+ +G+ V D  Y  I+L  L
Sbjct:  101 GDRTAAWRALNERFDAQTQEARRACHNELFNLRHLAGGDPIDFFRKGWDLKLRLKVLGEEVSDPVYLDIMLSGL 174          
BLAST of mRNA_H-paniculata_contig50927.12381.1 vs. uniprot
Match: A0A6H5J9Q7_9PHAE (gag_pre-integrs domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Q7_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 8.130e-5
Identity = 23/44 (52.27%), Postives = 31/44 (70.45%), Query Frame = 0
Query:    4 GDGQAAWNALVDKYNCQTTEAKKACHEKLVSTRMEPGQDPDDFF 47
            GDG AAW AL ++++ QT EA++ACH +L + R   G DP DFF
Sbjct:  101 GDGTAAWRALNERFDAQTQEARRACHNELFNLRHLAGGDPIDFF 144          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig50927.12381.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5KC00_9PHAE5.450e-2334.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBV6_9PHAE6.430e-2234.54Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5L4Y1_9PHAE1.820e-1632.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K626_9PHAE2.340e-832.77Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JKW9_9PHAE1.230e-641.89Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JC75_9PHAE1.680e-626.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRA6_9PHAE3.090e-644.07Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JWN9_9PHAE1.700e-540.54Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J9Q7_9PHAE8.130e-552.27gag_pre-integrs domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 8..87
e-value: 2.3E-8
score: 33.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig50927contigH-paniculata_contig50927:38..619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig50927.12381.1mRNA_H-paniculata_contig50927.12381.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig50927 38..619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig50927.12381.1 ID=prot_H-paniculata_contig50927.12381.1|Name=mRNA_H-paniculata_contig50927.12381.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=194bp
DGTGDGQAAWNALVDKYNCQTTEAKKACHEKLVSTRMEPGQDPDDFFFFL
DECRQTLEDMGQMVHDKRYEVIVLQDLHAEYERVRITSFEKRDFGLDDIR
YMVHAMYVHNLSRSSNFKPVAGRDIAMQAAGYNRSNVQCNYCKGVGHVIQ
DCAVLKAKELRQKAVVGHVRQGRDGKQKWCSFHKATTHSDEECR
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