prot_H-paniculata_contig5078.12361.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5078.12361.1
Unique Nameprot_H-paniculata_contig5078.12361.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length45
Homology
BLAST of mRNA_H-paniculata_contig5078.12361.1 vs. uniprot
Match: D7FL41_ECTSI (WD40 repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL41_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 3.330e-14
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 0
Query:    5 NAVILATAGYDHKIHFWEPPTGECVRTLRFSDSQV 39
            N VILATAGYDHKIHFWEPP+GEC  TLRFSDSQV
Sbjct:    2 NEVILATAGYDHKIHFWEPPSGECRSTLRFSDSQV 36          
BLAST of mRNA_H-paniculata_contig5078.12361.1 vs. uniprot
Match: K8Z5Y7_NANGC (Wd40 component of tor1 and tor2 kinase complex (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z5Y7_NANGC)

HSP 1 Score: 65.9 bits (159), Expect = 1.800e-13
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    2 DQSNAVILATAGYDHKIHFWEPPTGECVRTLRFSDSQV 39
            + S+AV+LATAGYDHKI FWE PTG C R++R+ DSQV
Sbjct:    1 EMSSAVVLATAGYDHKIRFWEAPTGVCARSIRYPDSQV 38          
BLAST of mRNA_H-paniculata_contig5078.12361.1 vs. uniprot
Match: A0A836C989_9STRA (WD40 repeat-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C989_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 6.310e-13
Identity = 28/35 (80.00%), Postives = 33/35 (94.29%), Query Frame = 0
Query:    5 NAVILATAGYDHKIHFWEPPTGECVRTLRFSDSQV 39
            N+VILATAGYDHK++FWEPP+G C RTLR+SDSQV
Sbjct:    2 NSVILATAGYDHKVNFWEPPSGVCSRTLRYSDSQV 36          
BLAST of mRNA_H-paniculata_contig5078.12361.1 vs. uniprot
Match: A0A4D9DF34_9STRA (Target of rapamycin complex subunit LST8 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DF34_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.560e-11
Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    4 SNAVILATAGYDHKIHFWEPPTGECVRTLRFSDSQV 39
            S+AV+LATAGYDHKI FWE PTG C R++R+ DSQV
Sbjct:    2 SSAVVLATAGYDHKIRFWEAPTGVCARSIRYPDSQV 37          
BLAST of mRNA_H-paniculata_contig5078.12361.1 vs. uniprot
Match: A0A6U2PBM4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2PBM4_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 4.230e-10
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    6 AVILATAGYDHKIHFWEPPTGECVRTLRFSDSQV 39
            +VILATAGYDHKI FWE P+G C RTLR+ DSQV
Sbjct:    2 SVILATAGYDHKIRFWEAPSGICSRTLRYPDSQV 35          
BLAST of mRNA_H-paniculata_contig5078.12361.1 vs. uniprot
Match: R1CS11_EMIHU (Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CS11_EMIHU)

HSP 1 Score: 59.3 bits (142), Expect = 1.600e-9
Identity = 24/38 (63.16%), Postives = 28/38 (73.68%), Query Frame = 0
Query:    2 DQSNAVILATAGYDHKIHFWEPPTGECVRTLRFSDSQV 39
            D   +V+LATAGYDH I FWE PTG C +TL+  DSQV
Sbjct:    3 DSGQSVLLATAGYDHTIRFWEAPTGVCYKTLQHPDSQV 40          
BLAST of mRNA_H-paniculata_contig5078.12361.1 vs. uniprot
Match: A0A4Y7L320_PAPSO (Uncharacterized protein n=1 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7L320_PAPSO)

HSP 1 Score: 59.3 bits (142), Expect = 1.640e-9
Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    6 AVILATAGYDHKIHFWEPPTGECVRTLRFSDSQV 39
            +VILATAGYDH I FWEP +G C RTL++ DSQ+
Sbjct:   92 SVILATAGYDHTIRFWEPKSGRCYRTLQYPDSQI 125          
BLAST of mRNA_H-paniculata_contig5078.12361.1 vs. uniprot
Match: A0A7S3LCW6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LCW6_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 3.150e-9
Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    6 AVILATAGYDHKIHFWEPPTGECVRTLRFSDSQV 39
            +V+LAT GYDHKI FWE P+G+C R ++FSDSQV
Sbjct:    2 SVVLATGGYDHKICFWEAPSGKCQRVIKFSDSQV 35          
BLAST of mRNA_H-paniculata_contig5078.12361.1 vs. uniprot
Match: R1DBC5_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DBC5_EMIHU)

HSP 1 Score: 59.3 bits (142), Expect = 3.940e-9
Identity = 24/38 (63.16%), Postives = 28/38 (73.68%), Query Frame = 0
Query:    2 DQSNAVILATAGYDHKIHFWEPPTGECVRTLRFSDSQV 39
            D   +V+LATAGYDH I FWE PTG C +TL+  DSQV
Sbjct:    3 DSGQSVLLATAGYDHTIRFWEAPTGVCYKTLQHPDSQV 40          
BLAST of mRNA_H-paniculata_contig5078.12361.1 vs. uniprot
Match: UPI000E6F71D0 (target of rapamycin complex subunit LST8 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6F71D0)

HSP 1 Score: 59.3 bits (142), Expect = 4.010e-9
Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    6 AVILATAGYDHKIHFWEPPTGECVRTLRFSDSQV 39
            +VILATAGYDH I FWEP +G C RTL++ DSQ+
Sbjct:    5 SVILATAGYDHTIRFWEPKSGRCYRTLQYPDSQI 38          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5078.12361.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL41_ECTSI3.330e-1488.57WD40 repeat containing protein n=1 Tax=Ectocarpus ... [more]
K8Z5Y7_NANGC1.800e-1368.42Wd40 component of tor1 and tor2 kinase complex (Fr... [more]
A0A836C989_9STRA6.310e-1380.00WD40 repeat-containing protein n=1 Tax=Tribonema m... [more]
A0A4D9DF34_9STRA3.560e-1172.22Target of rapamycin complex subunit LST8 n=3 Tax=M... [more]
A0A6U2PBM4_9STRA4.230e-1076.47Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
R1CS11_EMIHU1.600e-963.16Uncharacterized protein (Fragment) n=1 Tax=Emilian... [more]
A0A4Y7L320_PAPSO1.640e-967.65Uncharacterized protein n=1 Tax=Papaver somniferum... [more]
A0A7S3LCW6_9STRA3.150e-967.65Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
R1DBC5_EMIHU3.940e-963.16Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
UPI000E6F71D04.010e-967.65target of rapamycin complex subunit LST8 n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..41
e-value: 9.7E-7
score: 30.3
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 8..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5078contigH-paniculata_contig5078:3672..3806 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5078.12361.1mRNA_H-paniculata_contig5078.12361.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5078 3672..3806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5078.12361.1 ID=prot_H-paniculata_contig5078.12361.1|Name=mRNA_H-paniculata_contig5078.12361.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=45bp
MDQSNAVILATAGYDHKIHFWEPPTGECVRTLRFSDSQVILCLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf