prot_H-paniculata_contig5072.12352.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5072.12352.1
Unique Nameprot_H-paniculata_contig5072.12352.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length202
Homology
BLAST of mRNA_H-paniculata_contig5072.12352.1 vs. uniprot
Match: A0A6H5K275_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K275_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 2.910e-43
Identity = 74/125 (59.20%), Postives = 100/125 (80.00%), Query Frame = 0
Query:   77 PSMSSDIDTRPSSIKPISSHDEYLNALAENQDKLVVIKFYDQFCRACDEIRPRYEELSRGAHAQEAAFFQVEFTSCKDVCKQLGIRRLPTVQIYN-EEGRVADLPAGPSRFSQVEKIFEEVMAKR 200
            P+ + + + RP+ ++ I S+D+Y++A+A+++DKLVVIKFYDQFCRACDEIRPRYE+LSR    ++A FF VEF+  KD+CKQLGI RLPTVQIY+   GRVADLPAGPSRF+ VE+    V++ +
Sbjct:   67 PTAAQEPERRPN-VQAIDSNDDYVSAMAQHEDKLVVIKFYDQFCRACDEIRPRYEDLSRSQPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKIAAVISSK 190          
BLAST of mRNA_H-paniculata_contig5072.12352.1 vs. uniprot
Match: A0A835YVS6_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS6_9STRA)

HSP 1 Score: 103 bits (257), Expect = 9.400e-25
Identity = 53/112 (47.32%), Postives = 70/112 (62.50%), Query Frame = 0
Query:   90 IKPISSHDEYLNALAENQDKLVVIKFYDQFCRACDEIRPRYEELSRGAHAQE---AAFFQVEFTSCKDVCKQLGIRRLPTVQIYN-EEGRVADLPAGPSRFSQVEKIFEEVM 197
            +K I+   ++L A+A N DK VV+KFYD FCRAC  + P++E +     AQE    AF+QVEF   K +CK LGI  LPT+QIY    G++AD+P GP RF   E    EV+
Sbjct:   21 VKTITGEMQFLEAMAANGDKPVVLKFYDTFCRACKAVAPKFERM-----AQENPGVAFYQVEFRQDKPLCKSLGITMLPTIQIYQGSAGKIADMPVGPKRFHVAEATLAEVL 127          
BLAST of mRNA_H-paniculata_contig5072.12352.1 vs. uniprot
Match: A0A835YYQ5_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ5_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 3.700e-22
Identity = 51/107 (47.66%), Postives = 67/107 (62.62%), Query Frame = 0
Query:   97 DEYLNALAENQDKLVVIKFYDQFCRACDEIRPRYEELSRGAHAQE---AAFFQVEFTSCKDVCKQLGIRRLPTVQIYN-EEGRVADLPAGPSRFSQVEKIFEEVMAK 199
            D +L A+A N D+ VVIKFYD FCRAC  I P++E +     AQE    +F++VEF   K +CK LGI  LPT+QIY    G+VA +P GP RF   E+    V+A+
Sbjct:   75 DGFLEAMASNADRPVVIKFYDTFCRACKAIAPKFERM-----AQENPGVSFYEVEFRENKPLCKSLGITMLPTIQIYRGAAGKVASMPVGPKRFHLAEEALASVLAQ 176          
BLAST of mRNA_H-paniculata_contig5072.12352.1 vs. uniprot
Match: A0A7S4A7N2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7N2_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.610e-18
Identity = 46/112 (41.07%), Postives = 74/112 (66.07%), Query Frame = 0
Query:   88 SSIKPISSHDEYLNALAENQ-DKLVVIKFYDQFCRACDEIRPRYEELSRGAHAQEAAFFQVEFTSCKDVCKQLGIRRLPTVQIYN-EEGRVADLPAGPSRFSQVEKIFEEVM 197
            S +  I   D +L A++++  DK+V IKFY  +CRAC  I PR+E L++    +EAAF+++EF++ KD+C++L I++LP VQ +   EG VA +  GPS+F  V    E+++
Sbjct:  110 SHVPAIVDEDTFLAAMSKSAGDKVVAIKFYAGWCRACKTIAPRFERLAK-EFGEEAAFYEIEFSANKDLCRRLDIKKLPCVQFFRGAEGHVATVMCGPSKFPDVRLKLEDLL 220          
BLAST of mRNA_H-paniculata_contig5072.12352.1 vs. uniprot
Match: F0YB20_AURAN (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB20_AURAN)

HSP 1 Score: 76.3 bits (186), Expect = 1.020e-14
Identity = 37/98 (37.76%), Postives = 59/98 (60.20%), Query Frame = 0
Query:   90 IKPISSHDEYLNALAE-NQDKLVVIKFYDQFCRACDEIRPRYEELSRGAHAQEAAFFQVEFTSCKDVCKQLGIRRLPTVQIYNEE-GRVADLPAGPSR 185
            + PI   + +L A+     D+LV +KFY  +CRAC  I PR+E L++     E  FF++EF + K++C++L I++LP VQ +    G V  +  GPS+
Sbjct:    1 VVPIDGDEAFLAAMQYCTDDRLVAVKFYASWCRACKSIAPRFERLAKEFAGDEVQFFEIEFAANKELCRRLNIKKLPCVQYFRGSLGCVDTVMCGPSK 98          
BLAST of mRNA_H-paniculata_contig5072.12352.1 vs. uniprot
Match: A0A7S3VCG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VCG8_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 9.520e-12
Identity = 37/111 (33.33%), Postives = 64/111 (57.66%), Query Frame = 0
Query:   90 IKPISSHDEYLNALAENQDKLVVIKFYDQFCRACDEIRPRYEELSRGAHAQEA--AFFQVEFTSCKDVCKQLGIRRLPTVQIYN-EEGRVADLPAGPSRFSQVEKIFEEVM 197
            I  + S +E+   L +NQDK++++KFY  +CRAC  + P++ ++S+     +    F Q+   + K+  K LG+  LP+V IY  EEG +   P GPS+   ++K   +V+
Sbjct:  116 IYDLESKEEHQALLEQNQDKIILLKFYAPWCRACKGLEPKFIQISKDKKYAKLPLVFAQLSVANAKEYVKALGVLALPSVHIYGGEEGLLESFPCGPSKVPILKKKIAQVV 226          
BLAST of mRNA_H-paniculata_contig5072.12352.1 vs. uniprot
Match: A0A7S2UII6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UII6_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.390e-11
Identity = 37/105 (35.24%), Postives = 61/105 (58.10%), Query Frame = 0
Query:  108 DKLVVIKFYDQFCRACDEIRPRYEELS---------RGAHAQEAA--FFQVEFTSCKDVCKQLGIRRLPTVQIYN-EEGRVADLPAGPSRFSQVEKIFEEVMAKR 200
            D+L V+KF+  +C++C +   RY++L+         RGA  ++    F +VEFT+  D+CK LG+ +LP + IY+  +GRVAD   GP  F  V +   + + K+
Sbjct:    3 DRLCVVKFHASWCKSCQKFGIRYKKLALQEGDKIDRRGAVLEKGRVRFAEVEFTANADLCKTLGVHKLPYIHIYSGSKGRVADFACGPKNFPLVIEKMNKFLDKK 107          
BLAST of mRNA_H-paniculata_contig5072.12352.1 vs. uniprot
Match: A0A7S2GHN9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GHN9_9EUKA)

HSP 1 Score: 69.7 bits (169), Expect = 4.680e-11
Identity = 30/93 (32.26%), Postives = 52/93 (55.91%), Query Frame = 0
Query:  104 AENQDKLVVIKFYDQFCRACDEIRPRYEELSRGAHAQEAAFFQVEFTSCKDVCKQLGIRRLPTVQIY-NEEGRVADLPAGPSRFSQVEKIFEE 195
            A  +++ V IK Y  +CRAC  + P+YE +++        F+++ F   K +CK LGI+ LP +++    +G+V     GPS+ S++    EE
Sbjct:   81 AAREERTVCIKIYATWCRACKAMGPKYERIAKDPEYSHVEFYEIAFDDNKALCKSLGIKVLPVIEVVAGSKGKVTSFACGPSKMSKLTFALEE 173          
BLAST of mRNA_H-paniculata_contig5072.12352.1 vs. uniprot
Match: K0SW29_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SW29_THAOC)

HSP 1 Score: 71.2 bits (173), Expect = 6.000e-11
Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 0
Query:   96 HDEYLNALAENQDKLVVIKFYDQFCRACDEIRPRYEELSRGAHAQEAA--FFQVEFTSCKDVCKQLGIRRLPTVQIY-NEEGRVADLPAGPSRFSQVEKIFEEVM 197
            H  +L+A   N DK++VIKF+  +CRAC  + P+Y ++SR          F Q+   + K   K LGI  LP+VQIY   EG V + P GPS+   +++   EV+
Sbjct:   99 HTAWLDA---NSDKIMVIKFFAPWCRACKSVEPKYVQISRDPKYANIPIIFGQLSVQNNKSYVKSLGIMALPSVQIYAGSEGLVENFPCGPSKIPLLKRKLTEVI 200          
BLAST of mRNA_H-paniculata_contig5072.12352.1 vs. uniprot
Match: A0A7S0CNY7_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CNY7_MICPS)

HSP 1 Score: 68.9 bits (167), Expect = 6.660e-11
Identity = 41/134 (30.60%), Postives = 71/134 (52.99%), Query Frame = 0
Query:   75 NLPSMSSDIDTRPSSIKPISSHDEYLNALA-----ENQDKLVVIKFYDQFCRACDEIRPRYEELSRGAHAQEAAFFQVEFTSCKDVCKQLGIRRLPTVQIYNEEG-RVADLPAG--PSRFSQVEKIFEEVMAKR 200
            ++P+ S+ ID R        S DE  + +      E    L+V++FY ++C +C  + PR   L+     Q+  F +++F +CKD+C++LG+ +LP   +YN  G R+AD  A   P++F ++    E   A R
Sbjct:   44 DVPATSNFIDVR--------SEDELRDVMRAAYGNERASTLLVVEFYGKWCNSCRRLYPRLRRLAE--QEQDVLFCKIDFDACKDLCRKLGVVKLPYFHVYNGSGSRLADFAASLDPAKFKRLTDAIETHRAPR 167          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5072.12352.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K275_9PHAE2.910e-4359.20Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A835YVS6_9STRA9.400e-2547.32Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A835YYQ5_9STRA3.700e-2247.66Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7S4A7N2_9STRA1.610e-1841.07Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
F0YB20_AURAN1.020e-1437.76Thioredoxin domain-containing protein (Fragment) n... [more]
A0A7S3VCG8_9STRA9.520e-1233.33Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A7S2UII6_9STRA1.390e-1135.24Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2GHN9_9EUKA4.680e-1132.26Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
K0SW29_THAOC6.000e-1138.10Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S0CNY7_MICPS6.660e-1130.60Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 96..179
e-value: 1.6E-14
score: 53.7
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 65..198
score: 10.688
NoneNo IPR availableGENE3D3.40.30.10coord: 80..200
e-value: 5.7E-17
score: 63.6
NoneNo IPR availablePANTHERPTHR43601FAMILY NOT NAMEDcoord: 87..196
NoneNo IPR availablePANTHERPTHR43601:SF10THIOREDOXIN-LIKE 2-2, CHLOROPLASTICcoord: 87..196
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..201
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.864
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 86..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5072contigH-paniculata_contig5072:1845..7307 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5072.12352.1mRNA_H-paniculata_contig5072.12352.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5072 434..7641 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5072.12352.1 ID=prot_H-paniculata_contig5072.12352.1|Name=mRNA_H-paniculata_contig5072.12352.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=202bp
MATICRTALAVVATLLCVASGAAFVLAPVSLSSAVRNGGYGNGRGSCVAT
ATHSSRGTYWSTSPSMALATPPPTNLPSMSSDIDTRPSSIKPISSHDEYL
NALAENQDKLVVIKFYDQFCRACDEIRPRYEELSRGAHAQEAAFFQVEFT
SCKDVCKQLGIRRLPTVQIYNEEGRVADLPAGPSRFSQVEKIFEEVMAKR
A*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf