prot_H-paniculata_contig4988.12198.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4988.12198.1
Unique Nameprot_H-paniculata_contig4988.12198.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length631
Homology
BLAST of mRNA_H-paniculata_contig4988.12198.1 vs. uniprot
Match: D8LEB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB4_ECTSI)

HSP 1 Score: 455 bits (1170), Expect = 1.110e-149
Identity = 320/642 (49.84%), Postives = 378/642 (58.88%), Query Frame = 0
Query:   17 MIFSSAPHWLEFVPAEGLAVCEYVCSTFRIAAQEDRLWKEACHRRWTRVNAGT---------------GGYRRSFASLNGWRTP--RFRRTILTT------TAPSRTRSSQAAA-GGSHARNISAMDVGPSKVVVCSADTAWFYKVSTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGSVPSDAHVEPQAPWGCRVLGWNVTEARFSADERRCYFGTVSGLIYSHEVG----DAPRGRRDSSSSRPHRRPIVSNFLTTASGSPVAVRQIVQNVEGGSAAGAKLGVLCRPPSGWQPNLDGVDAGGYLILVDTEAQATARTMRLSDGTLGGEKFPSMTCGGAAVSLAAVGSSGSTSGMPLAAGG--EAFAVGYGGGAVTLLDGRCRERGGMVGGFVTSHRWLERVRCAGYLLMTSYGRFKFIETWDLRKLPSRG--ECPYANTGRVVSRSRPPPRTADLTCAGHAPDFWVAPHGLTVAVYGAPRKSQSFGARHSFWSWPTAKDRLLFVPQTDPLNFSRGAERMGRRGGGDXXXSAGAGVELSVPGVVNDSDYRLKLSTGIKFCDTHMATVLDESRVLVDE--VMGSETSG-GARGEEGVRSVHLSA 623
            ++ SSA HWLEF+PAEG+A+C  VC+  + AA+EDRLWK+ CHRRW RVN                  GG++ ++ASLNGWR P  R RRTIL+T      T    TR +Q  A GG  A NIS MDVGP +VVVCSAD AW+Y V   +                      XXXXXXXXXXXXXXXXXXXXXXXXX                                 G ++    VTEAR+S D  RC+FGTVSG I+ H+ G    D    R  SS +     P ++  L++ +GSPVAVRQ+V   EGG   G++LGVLCRP   WQPNL+G   GGYL LVDT+AQA  R M L  G+LGG  FP+M  GGAAVS+A +    S+ GMP  + G  E FAVG+ GG V + D RC E GGMVGGF T HRWL+R+R AG LLM SYGR K IETWD+R+LPSR   E P    G    R R PP  ADL C  ++PDFWV PHGL VAV+GAPR SQ FGA+H+FW WP     +  V  TDP      A     RG G      G  V   VPGVVNDS YR+ LSTG+KF DTHMATVLD SRVLVDE  VM   + G G R   GV S+ L+A
Sbjct:   15 LLISSAAHWLEFLPAEGVAMCCGVCAGLKQAAEEDRLWKDLCHRRWRRVNVDVARPNNRKCDGGGSVIGGHQAAYASLNGWRDPTNRLRRTILSTAPNDAVTGRRFTRGAQGVAPGGGPATNISGMDVGPCRVVVCSADFAWYYNVRQGSNTSRQRRQQPRDATSDSASIDSXXXXXXXXXXXXXXXXXXXXXXXXXSSRTLR---------------------------GFQLPSSGVTEARYSGDGERCFFGTVSGHIFVHKCGGDDDDKDGERHRSSEAVEPWTPTLA--LSSPTGSPVAVRQVVARFEGGCPGGSRLGVLCRPTLVWQPNLEGSGEGGYLFLVDTQAQAVTRQMNLGGGSLGGLTFPTMERGGAAVSMAPL----SSEGMPFGSSGSGELFAVGFAGGTVAVFDARCHEGGGMVGGFTTRHRWLKRLRSAGPLLMNSYGRTKNIETWDMRRLPSRATHEPP---PGLPSPRLRAPPCLADLACPANSPDFWVEPHGLCVAVHGAPRHSQRFGAKHAFWPWPRQTGGVATV-STDP-----NAPACSARGDGGGVEIPGRCVV--VPGVVNDSGYRMCLSTGVKFTDTHMATVLDSSRVLVDEMAVMPRVSRGSGDREGAGVTSLFLAA 612          
BLAST of mRNA_H-paniculata_contig4988.12198.1 vs. uniprot
Match: A0A6H5KAW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW4_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 5.200e-9
Identity = 34/65 (52.31%), Postives = 40/65 (61.54%), Query Frame = 0
Query:   47 AAQEDRLWKEACHRRWTRVNAGT---------------GGYRRSFASLNGWRTP--RFRRTILTT 94
            AAQEDRLWK+ CHRRW RVN                  GG++ ++ASLNGWR P  R RRTIL+T
Sbjct:    5 AAQEDRLWKDLCHRRWRRVNVDVARPNNRTCDGGGGVIGGHQAAYASLNGWRDPTNRLRRTILST 69          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4988.12198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEB4_ECTSI1.110e-14949.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAW4_9PHAE5.200e-952.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1280.50coord: 22..94
e-value: 4.9E-5
score: 25.2
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 26..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4988contigH-paniculata_contig4988:854..12296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4988.12198.1mRNA_H-paniculata_contig4988.12198.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4988 825..12296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4988.12198.1 ID=prot_H-paniculata_contig4988.12198.1|Name=mRNA_H-paniculata_contig4988.12198.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=631bp
MEGEGESDGALSYTNGMIFSSAPHWLEFVPAEGLAVCEYVCSTFRIAAQE
DRLWKEACHRRWTRVNAGTGGYRRSFASLNGWRTPRFRRTILTTTAPSRT
RSSQAAAGGSHARNISAMDVGPSKVVVCSADTAWFYKVSTSASSSSSSSS
SSTLGGRQHHRRRQYYHQQQQPDGEQQQVRQSSSADTVGNDQESDDDDEK
EEKEEKKGSVPSDAHVEPQAPWGCRVLGWNVTEARFSADERRCYFGTVSG
LIYSHEVGDAPRGRRDSSSSRPHRRPIVSNFLTTASGSPVAVRQIVQNVE
GGSAAGAKLGVLCRPPSGWQPNLDGVDAGGYLILVDTEAQATARTMRLSD
GTLGGEKFPSMTCGGAAVSLAAVGSSGSTSGMPLAAGGEAFAVGYGGGAV
TLLDGRCRERGGMVGGFVTSHRWLERVRCAGYLLMTSYGRFKFIETWDLR
KLPSRGECPYANTGRVVSRSRPPPRTADLTCAGHAPDFWVAPHGLTVAVY
GAPRKSQSFGARHSFWSWPTAKDRLLFVPQTDPLNFSRGAERMGRRGGGD
GGGSAGAGVELSVPGVVNDSDYRLKLSTGIKFCDTHMATVLDESRVLVDE
VMGSETSGGARGEEGVRSVHLSAQCVDVLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf