prot_H-paniculata_contig49813.12188.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig49813.12188.1 vs. uniprot
Match: D8LL81_ECTSI (DNA-directed RNA polymerase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL81_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 2.050e-24 Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0
Query: 6 VEETCPKCGHQKMEFYTMQLRSADEGQTVFYECLSKDCKHKYSLNN 51
VEE CPKCGH KMEFYTMQLRSADEGQTVFYECLSK CKHKY++NN
Sbjct: 70 VEEACPKCGHPKMEFYTMQLRSADEGQTVFYECLSKACKHKYAVNN 115
BLAST of mRNA_H-paniculata_contig49813.12188.1 vs. uniprot
Match: A0A836CG05_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG05_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.940e-22 Identity = 37/46 (80.43%), Postives = 44/46 (95.65%), Query Frame = 0
Query: 6 VEETCPKCGHQKMEFYTMQLRSADEGQTVFYECLSKDCKHKYSLNN 51
V+E CPKCGH +MEFYTMQLRSADEGQTVFYECL+K+C+HK+S+NN
Sbjct: 70 VDEQCPKCGHPEMEFYTMQLRSADEGQTVFYECLNKNCQHKFSVNN 115
BLAST of mRNA_H-paniculata_contig49813.12188.1 vs. uniprot
Match: A0A0D2MM84_9CHLO (DNA-directed RNA polymerase I subunit RPA12 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MM84_9CHLO) HSP 1 Score: 82.8 bits (203), Expect = 1.210e-19 Identity = 37/45 (82.22%), Postives = 39/45 (86.67%), Query Frame = 0
Query: 6 VEETCPKCGHQKMEFYTMQLRSADEGQTVFYECLSKDCKHKYSLN 50
V+E CP+CGHQ MEFYTMQLRSADEGQTVFYEC DCKHKYS N
Sbjct: 38 VDEKCPQCGHQGMEFYTMQLRSADEGQTVFYEC--PDCKHKYSTN 80
BLAST of mRNA_H-paniculata_contig49813.12188.1 vs. uniprot
Match: A0A0H5RCQ6_9EUKA (DNA-directed RNA polymerase subunit n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RCQ6_9EUKA) HSP 1 Score: 82.0 bits (201), Expect = 7.490e-19 Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 0
Query: 6 VEETCPKCGHQKMEFYTMQLRSADEGQTVFYECLSKDCKHKYSLNN 51
V+E CP CGH ++ FYTMQ+RSADEGQTVFYECL+ CKHKYSLNN
Sbjct: 80 VQEECPSCGHPELSFYTMQMRSADEGQTVFYECLN--CKHKYSLNN 123
BLAST of mRNA_H-paniculata_contig49813.12188.1 vs. uniprot
Match: A0A024TQD9_9STRA (DNA-directed RNA polymerase subunit n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TQD9_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 7.680e-19 Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 0
Query: 6 VEETCPKCGHQKMEFYTMQLRSADEGQTVFYECLSKDCKHKYSLN 50
VEETCPKCGH +MEFYT+QLRSADEGQTVFYEC K C H+YS+N
Sbjct: 81 VEETCPKCGHPEMEFYTLQLRSADEGQTVFYEC--KKCGHRYSVN 123
BLAST of mRNA_H-paniculata_contig49813.12188.1 vs. uniprot
Match: A0A485LF44_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LF44_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 3.110e-18 Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 0
Query: 6 VEETCPKCGHQKMEFYTMQLRSADEGQTVFYECLSKDCKHKYSLN 50
VEETCPKCG+ +MEFYTMQLRSADEGQTVFYEC K C H+YS+N
Sbjct: 81 VEETCPKCGNPQMEFYTMQLRSADEGQTVFYEC--KKCGHRYSVN 123
BLAST of mRNA_H-paniculata_contig49813.12188.1 vs. uniprot
Match: A0A6G0WT35_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WT35_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 3.110e-18 Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 0
Query: 6 VEETCPKCGHQKMEFYTMQLRSADEGQTVFYECLSKDCKHKYSLN 50
VEETCPKCG+ +MEFYTMQLRSADEGQTVFYEC K C H+YS+N
Sbjct: 81 VEETCPKCGNPQMEFYTMQLRSADEGQTVFYEC--KKCGHRYSVN 123
BLAST of mRNA_H-paniculata_contig49813.12188.1 vs. uniprot
Match: A0A2D4BKP7_PYTIN (DNA-directed RNA polymerase subunit n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BKP7_PYTIN) HSP 1 Score: 80.1 bits (196), Expect = 4.180e-18 Identity = 35/46 (76.09%), Postives = 41/46 (89.13%), Query Frame = 0
Query: 6 VEETCPKCGHQKMEFYTMQLRSADEGQTVFYECLSKDCKHKYSLNN 51
VEETCPKCG+ +M++YTMQLRSADEGQTVFYEC K C HK+S+NN
Sbjct: 79 VEETCPKCGNPEMDYYTMQLRSADEGQTVFYEC--KKCGHKFSVNN 122
BLAST of mRNA_H-paniculata_contig49813.12188.1 vs. uniprot
Match: A0A484EDY4_BRELC (DNA-directed RNA polymerase subunit n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDY4_BRELC) HSP 1 Score: 80.1 bits (196), Expect = 4.520e-18 Identity = 36/46 (78.26%), Postives = 41/46 (89.13%), Query Frame = 0
Query: 6 VEETCPKCGHQKMEFYTMQLRSADEGQTVFYECLSKDCKHKYSLNN 51
VEETCPKCG+++MEFYT+QLRSADEGQTVFYEC K C HK S+NN
Sbjct: 82 VEETCPKCGNREMEFYTLQLRSADEGQTVFYEC--KKCGHKSSVNN 125
BLAST of mRNA_H-paniculata_contig49813.12188.1 vs. uniprot
Match: A0A0W8CTM2_PHYNI (DNA-directed RNA polymerase subunit n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CTM2_PHYNI) HSP 1 Score: 79.0 bits (193), Expect = 7.080e-18 Identity = 34/46 (73.91%), Postives = 41/46 (89.13%), Query Frame = 0
Query: 6 VEETCPKCGHQKMEFYTMQLRSADEGQTVFYECLSKDCKHKYSLNN 51
VEETCPKCG+ +M++YT+QLRSADEGQTVFYEC K C HK+S+NN
Sbjct: 59 VEETCPKCGNPEMDYYTLQLRSADEGQTVFYEC--KKCGHKFSVNN 102 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig49813.12188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig49813.12188.1 ID=prot_H-paniculata_contig49813.12188.1|Name=mRNA_H-paniculata_contig49813.12188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=52bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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