prot_H-paniculata_contig4951.12138.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4951.12138.1
Unique Nameprot_H-paniculata_contig4951.12138.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length136
Homology
BLAST of mRNA_H-paniculata_contig4951.12138.1 vs. uniprot
Match: A0A6H5KFI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI4_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 7.750e-55
Identity = 97/118 (82.20%), Postives = 108/118 (91.53%), Query Frame = 0
Query:   18 GLEALVLCPTRELALQVAAHLREVIGGTGLSVVAIVGGLAEVKQERQLSRRPEVVVATPGRFWELAGTHAHLSRLGKLRHLVVDEADRMLETGHYPELKRLFSLLDKADGQGEEQEGG 135
            GL+ALVLCPTRELALQVAAHLREV+  TG++VVA+VGGLAEVKQ+RQLSRRPEVVVATPGRFWE+AGTHAHLSRL  LRHLVVDEADRMLE GHYPEL RLFS+L KA+G+ E  +GG
Sbjct:  373 GLQALVLCPTRELALQVAAHLREVVRDTGVAVVAVVGGLAEVKQQRQLSRRPEVVVATPGRFWEMAGTHAHLSRLETLRHLVVDEADRMLERGHYPELSRLFSMLAKAEGRREGGDGG 490          
BLAST of mRNA_H-paniculata_contig4951.12138.1 vs. uniprot
Match: A0A2V0P9E8_9CHLO (DEAD-box ATP-dependent RNA helicase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P9E8_9CHLO)

HSP 1 Score: 131 bits (330), Expect = 7.010e-33
Identity = 67/109 (61.47%), Postives = 82/109 (75.23%), Query Frame = 0
Query:   17 GGLEALVLCPTRELALQVAAHLREVIGGTGLSVVAIVGGLAEVKQERQLSRRPEVVVATPGRFWELAGT-HAHLSRLGKLRHLVVDEADRMLETGHYPELKRLFSLLDK 124
            G L ALVL PTRELALQV AHL+ +    G+ V  IVGG+A VKQER L+RRPEVVVATPGR W+L  + HAHL+RL +LR LV+DEADRM++ GHY EL  +  L+ +
Sbjct:  394 GALRALVLAPTRELALQVCAHLQALGRVAGIGVAPIVGGIAAVKQERLLARRPEVVVATPGRLWDLMSSGHAHLTRLARLRVLVIDEADRMVQQGHYQELSSILDLIPR 502          
BLAST of mRNA_H-paniculata_contig4951.12138.1 vs. uniprot
Match: A0A812AWJ0_SEPPH (RNA helicase n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812AWJ0_SEPPH)

HSP 1 Score: 128 bits (322), Expect = 7.990e-32
Identity = 61/108 (56.48%), Postives = 83/108 (76.85%), Query Frame = 0
Query:   18 GLEALVLCPTRELALQVAAHLREVIGGTGLSVVAIVGGLAEVKQERQLSRRPEVVVATPGRFWEL-AGTHAHLSRLGKLRHLVVDEADRMLETGHYPELKRLFSLLDK 124
            GL+AL+L PTRELA+QV  HL +    T + +VAIVGG++E KQER L R+PE++VATPGRFWEL   ++ H+S +  ++HLV+DEADRM+E GH+ EL +LF  LD+
Sbjct:  238 GLKALILAPTRELAIQVKNHLLKAAQFTDIKIVAIVGGMSEQKQERLLKRKPEIIVATPGRFWELFENSNPHISTVSHIKHLVIDEADRMIEKGHFEELHKLFEHLDE 345          
BLAST of mRNA_H-paniculata_contig4951.12138.1 vs. uniprot
Match: A0A0D2M6Y2_9CHLO (DEAD-box ATP-dependent RNA helicase 13 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2M6Y2_9CHLO)

HSP 1 Score: 126 bits (316), Expect = 5.370e-31
Identity = 66/107 (61.68%), Postives = 78/107 (72.90%), Query Frame = 0
Query:   19 LEALVLCPTRELALQVAAHLREVIGGTGLSVVAIVGGLAEVKQERQLSRRPEVVVATPGRFWELAGT-HAHLSRLGKLRHLVVDEADRMLETGHYPELKRLFSLLDK 124
            L ALVL PTRELALQV A L  +    G+ V  IVGG+A VKQER LSRRPEVVVATPGR W+L    HAHL+RL +LR LV+DEADRM++ GHY EL  +  L+ +
Sbjct:  383 LRALVLAPTRELALQVCAALSALARVAGVGVAPIVGGIAAVKQERLLSRRPEVVVATPGRLWDLMSQGHAHLTRLQRLRFLVIDEADRMVQQGHYQELSNILDLIPR 489          
BLAST of mRNA_H-paniculata_contig4951.12138.1 vs. uniprot
Match: A0A7R9YE61_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE61_9STRA)

HSP 1 Score: 120 bits (301), Expect = 4.810e-30
Identity = 65/115 (56.52%), Postives = 77/115 (66.96%), Query Frame = 0
Query:   20 EALVLCPTRELALQVAAHLREVIGGTG-------LSVVAIVGGLAEVKQERQLSRRPEVVVATPGRFWELA-----GTHAHLSRLGKLRHLVVDEADRMLETGHYPELKRLFSLL 122
            +ALVL PTRELA+QV  HLR + GG G       L +  IVGG+AE KQ+R L   PEV+VATPGRFWE+      G    LSRLG+LR LVVDEADRM+ETG + ELK L   +
Sbjct:  172 KALVLAPTRELAMQVTQHLRRIAGGAGSKATTTSLQITPIVGGMAEQKQQRFLKMHPEVIVATPGRFWEMVKNDQDGEEPFLSRLGRLRFLVVDEADRMVETGRFRELKSLLQYV 286          
BLAST of mRNA_H-paniculata_contig4951.12138.1 vs. uniprot
Match: B7PHX8_IXOSC (RNA helicase (Fragment) n=1 Tax=Ixodes scapularis TaxID=6945 RepID=B7PHX8_IXOSC)

HSP 1 Score: 120 bits (300), Expect = 2.190e-29
Identity = 62/112 (55.36%), Postives = 81/112 (72.32%), Query Frame = 0
Query:   19 LEALVLCPTRELALQVAAHLREVIGGTGLSVVAIVGGLAEVKQERQLSRRPEVVVATPGRFWELAGTHA-HLSRLGKLRHLVVDEADRMLETGHYPELKRLFSLL--DKADG 127
            L+ALVL PTRELA+QV  HL+     TG+ VV ++GGL+  KQ R L RRPE+VVATPGR WEL   +  HLS +  +R+LV+DEADRM+E GH+ +L RL +L+  D+ DG
Sbjct:  138 LQALVLTPTRELAIQVKQHLQSAAKYTGIGVVNVIGGLSADKQLRLLKRRPEIVVATPGRLWELVDQNTPHLSDVSNVRYLVIDEADRMVEKGHFEDLTRLLALMNADRVDG 249          
BLAST of mRNA_H-paniculata_contig4951.12138.1 vs. uniprot
Match: A0A836CDB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDB6_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.040e-29
Identity = 67/120 (55.83%), Postives = 77/120 (64.17%), Query Frame = 0
Query:   17 GGLEALVLCPTRELALQVAAHLREVIGGTGL-------------SVVAIVGGLAEVKQERQLSRRPEVVVATPGRFWELAGTHAHLSRLGKLRHLVVDEADRMLETGHYPELKRLFSLLD 123
            G L+ALVLCPTRELALQV  HL  V  GTG+              +V IVGGLAEVKQ R L RRPEVVVATPGR WE+  +  HL  L  LR LV+DEADRM E G + EL +L   ++
Sbjct:  458 GLLQALVLCPTRELALQVTKHLVAVSEGTGVXXXXXXXXXXXXVGIVCIVGGLAEVKQSRLLKRRPEVVVATPGRLWEMRASEPHLRDLSGLRFLVIDEADRMAEKGRFEELGKLLRTIN 577          
BLAST of mRNA_H-paniculata_contig4951.12138.1 vs. uniprot
Match: UPI00125E48A4 (DEAD-box ATP-dependent RNA helicase 13-like n=3 Tax=Ipomoea TaxID=4119 RepID=UPI00125E48A4)

HSP 1 Score: 120 bits (301), Expect = 5.460e-29
Identity = 62/110 (56.36%), Postives = 77/110 (70.00%), Query Frame = 0
Query:   17 GGLEALVLCPTRELALQVAAHLREVIGGTGLSVVAIVGGLAEVKQERQLSRRPEVVVATPGRFWEL-AGTHAHLSRLGKLRHLVVDEADRMLETGHYPELKRLFSLLDKA 125
            G L AL++ PTRELALQV  H+REV   T + V+AIVGG++  KQER L RRPE+VV TPGR WEL +G   HL  L  L   V+DEADRM+ETGH+ EL+ +  +L  A
Sbjct:  251 GLLRALIVTPTRELALQVTDHIREVAKHTNIRVIAIVGGMSTEKQERLLKRRPEIVVGTPGRLWELMSGGEVHLIELHSLSFFVLDEADRMIETGHFQELQSIVDVLPMA 360          
BLAST of mRNA_H-paniculata_contig4951.12138.1 vs. uniprot
Match: A0A5J5C446_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5C446_9ASTE)

HSP 1 Score: 120 bits (300), Expect = 7.460e-29
Identity = 64/116 (55.17%), Postives = 77/116 (66.38%), Query Frame = 0
Query:   17 GGLEALVLCPTRELALQVAAHLREVIGGTGLSVVAIVGGLAEVKQERQLSRRPEVVVATPGRFWEL-AGTHAHLSRLGKLRHLVVDEADRMLETGHYPELKRLFSLLDKADGQGEE 131
            G L AL++ PTRELALQV  HL+EV  GT + VV IVGG++  KQER L  RPE+VV TPGR WEL +G   HL  L  L   V+DEADRM+E GH+ EL+ +  LL    G  EE
Sbjct:  250 GLLRALIITPTRELALQVTDHLKEVAKGTNIRVVPIVGGMSTEKQERVLKARPEIVVGTPGRLWELMSGGEIHLVELHSLSFFVLDEADRMIENGHFHELQSIIDLLPMTSGSIEE 365          
BLAST of mRNA_H-paniculata_contig4951.12138.1 vs. uniprot
Match: A0A6P7UAY8_IXOSC (RNA helicase n=6 Tax=Ixodes TaxID=6944 RepID=A0A6P7UAY8_IXOSC)

HSP 1 Score: 119 bits (299), Expect = 9.250e-29
Identity = 62/112 (55.36%), Postives = 81/112 (72.32%), Query Frame = 0
Query:   19 LEALVLCPTRELALQVAAHLREVIGGTGLSVVAIVGGLAEVKQERQLSRRPEVVVATPGRFWELAGTHA-HLSRLGKLRHLVVDEADRMLETGHYPELKRLFSLL--DKADG 127
            L+ALVL PTRELA+QV  HL+     TG+ VV ++GGL+  KQ R L RRPE+VVATPGR WEL   +  HLS +  +R+LV+DEADRM+E GH+ +L RL +L+  D+ DG
Sbjct:  180 LQALVLTPTRELAIQVKQHLQAAAKYTGIGVVNVIGGLSADKQLRLLKRRPEIVVATPGRLWELVDQNTPHLSDVSNVRYLVIDEADRMVEKGHFEDLTRLLALMNADRVDG 291          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4951.12138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFI4_9PHAE7.750e-5582.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2V0P9E8_9CHLO7.010e-3361.47DEAD-box ATP-dependent RNA helicase n=1 Tax=Raphid... [more]
A0A812AWJ0_SEPPH7.990e-3256.48RNA helicase n=1 Tax=Sepia pharaonis TaxID=158019 ... [more]
A0A0D2M6Y2_9CHLO5.370e-3161.68DEAD-box ATP-dependent RNA helicase 13 n=1 Tax=Mon... [more]
A0A7R9YE61_9STRA4.810e-3056.52Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
B7PHX8_IXOSC2.190e-2955.36RNA helicase (Fragment) n=1 Tax=Ixodes scapularis ... [more]
A0A836CDB6_9STRA3.040e-2955.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI00125E48A45.460e-2956.36DEAD-box ATP-dependent RNA helicase 13-like n=3 Ta... [more]
A0A5J5C446_9ASTE7.460e-2955.17Uncharacterized protein n=1 Tax=Nyssa sinensis Tax... [more]
A0A6P7UAY8_IXOSC9.250e-2955.36RNA helicase n=6 Tax=Ixodes TaxID=6944 RepID=A0A6P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 14..131
e-value: 6.8E-23
score: 81.3
NoneNo IPR availableGENE3D3.40.50.300coord: 5..134
e-value: 1.3E-35
score: 124.7
NoneNo IPR availablePANTHERPTHR24031:SF627ATP-DEPENDENT RNA HELICASE DBPAcoord: 15..119
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 15..119
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 99..107
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..120
score: 14.678
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4951contigH-paniculata_contig4951:1729..4016 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4951.12138.1mRNA_H-paniculata_contig4951.12138.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4951 1728..4016 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4951.12138.1 ID=prot_H-paniculata_contig4951.12138.1|Name=mRNA_H-paniculata_contig4951.12138.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp
RPPRPPPPQQQQQQQQGGLEALVLCPTRELALQVAAHLREVIGGTGLSVV
AIVGGLAEVKQERQLSRRPEVVVATPGRFWELAGTHAHLSRLGKLRHLVV
DEADRMLETGHYPELKRLFSLLDKADGQGEEQEGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase