prot_H-paniculata_contig49133.12087.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig49133.12087.1 vs. uniprot
Match: W7T0D1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0D1_9STRA) HSP 1 Score: 115 bits (287), Expect = 5.750e-27 Identity = 60/141 (42.55%), Postives = 86/141 (60.99%), Query Frame = 0
Query: 1 MSTLRTVFSLAAEHDFELEGMDVDAVYWNAPVEEELFVKQPPEFSPF-SRDVPFVRRLRKSLYGLKQSDRNWNNTLDDFLVGIGLDRSTTDSCLHFSRDEGGETNLLVVLEDLKHNISQRFRMKDLGSLPRVLGIEVRRGR 140
++T+R V +LA D EL+ MDVD Y + +EE++++KQPP + + S V RLRKSLYGLKQS RNW+ +D + G G S+TD CL+ GE + ++ KH IS+ F MKDL L +LG+ ++R R
Sbjct: 322 ITTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSTDPCLYVKFGSSGE---MEMVNSFKHAISREFSMKDLKELHWILGMAIKRDR 459
BLAST of mRNA_H-paniculata_contig49133.12087.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.360e-25 Identity = 62/157 (39.49%), Postives = 88/157 (56.05%), Query Frame = 0
Query: 1 MSTLRTVFSLAAEHDFELEGMDVDAVYWNAPVEEELFVKQPPEFSPFSRDV-PFVRRLRKSLYGLKQSDRNWNNTLDDFLVGIGLDRSTTDSCLHFSRDEGGETNLLVVLED--------------LKHNISQRFRMKDLGSLPRVLGIEVRRGRPN 142
M+T+R V +LA D EL+ MDVD Y + +EE++++KQPP + + + V RLRKSLYGLKQS RNW+ +D + G GL S D CL+ GE ++V+ D K +IS+ F MKDL L +LG+ ++R R N
Sbjct: 284 MTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEILVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNREN 440
BLAST of mRNA_H-paniculata_contig49133.12087.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.700e-25 Identity = 61/155 (39.35%), Postives = 87/155 (56.13%), Query Frame = 0
Query: 1 MSTLRTVFSLAAEHDFELEGMDVDAVYWNAPVEEELFVKQPPEFSPF-SRDVPFVRRLRKSLYGLKQSDRNWNNTLDDFLVGIGLDRSTTDSCLHFSRDEGGETNLLVVLED--------------LKHNISQRFRMKDLGSLPRVLGIEVRRGR 140
++T+R V +LA D EL+ MDV+ Y + +EE+++VKQPP + + S V RLRKSLYGLKQS RNW+ +D + G G S+ D CL+ GE ++V+ D KH IS+ F MKDL L +LG+ ++R R
Sbjct: 64 ITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDR 218
BLAST of mRNA_H-paniculata_contig49133.12087.1 vs. uniprot
Match: W7TII5_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TII5_9STRA) HSP 1 Score: 104 bits (260), Expect = 2.350e-24 Identity = 57/155 (36.77%), Postives = 86/155 (55.48%), Query Frame = 0
Query: 1 MSTLRTVFSLAAEHDFELEGMDVDAVYWNAPVEEELFVKQPPEFSPFSRD-VPFVRRLRKSLYGLKQSDRNWNNTLDDFLVGIGLDRSTTDSCLHFSRDEGGETNLLVV--------------LEDLKHNISQRFRMKDLGSLPRVLGIEVRRGR 140
++T+R + ++A D EL+ MDVD Y + +EE+++VKQPP + + V RLRKSLYGLKQS RNW+ +D + G G S+ D CL+ GE ++V+ ++D K IS+ MKDL L +LG+ ++R R
Sbjct: 64 ITTIRLILAIACILDLELDNMDVDTAYLQSDLEEKIYVKQPPGYEQCGPNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSADPCLYVKFGSSGEMLVIVLYVDDLIIAGNSRDMVDDFKQAISKEISMKDLKELDWILGMAIKRNR 218
BLAST of mRNA_H-paniculata_contig49133.12087.1 vs. uniprot
Match: A0A7D9HG25_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HG25_PARCT) HSP 1 Score: 106 bits (265), Expect = 2.910e-24 Identity = 58/155 (37.42%), Postives = 92/155 (59.35%), Query Frame = 0
Query: 1 MSTLRTVFSLAAEHDFELEGMDVDAVYWNAPVEEELFVKQPPEFSPFSRD-VPFVRRLRKSLYGLKQSDRNWNNTLDDFLVGIGLDRSTTDSCLHFSRDEGGETNLLVVL--EDL-------------KHNISQRFRMKDLGSLPRVLGIEVRRG 139
++++ + LAA++D + MDV + +AP++ E+F++QP F S + V V RL+KSLYGLKQS RNWN LD++L+ G R+ D C++ + + GE ++VV+ +DL K N+ +FRMKDLG + LGI ++G
Sbjct: 234 ITSITILMQLAAQYDLTVHQMDVKTAFLHAPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFVRNPVDHCVY--QKQTGEDIIIVVIWVDDLIIASSNTDKIRQFKENMKSKFRMKDLGEISYFLGISFKQG 386
BLAST of mRNA_H-paniculata_contig49133.12087.1 vs. uniprot
Match: A0A2G8JVM6_STIJA (Uncharacterized protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JVM6_STIJA) HSP 1 Score: 107 bits (266), Expect = 4.080e-24 Identity = 56/148 (37.84%), Postives = 86/148 (58.11%), Query Frame = 0
Query: 1 MSTLRTVFSLAAEHDFELEGMDVDAVYWNAPVEEELFVKQPPEFSPFSRD-VPFVRRLRKSLYGLKQSDRNWNNTLDDFLVGIGLDRSTTDSCLHFSRDEGGETNLLV-------------VLEDLKHNISQRFRMKDLGSLPRVLGI 134
+S++R + L+ +H+ + MDV Y NAP++ EL+V+QP F+ ++ V RL+KSLYGLKQS RNWN+ L + VG +S D C++ +E T +LV +LED+K ++ RF+MKDLG + LG+
Sbjct: 719 ISSIRALMQLSIQHNLIVHQMDVKTAYLNAPIDCELYVEQPEGFAVSGKNGEKLVCRLKKSLYGLKQSGRNWNSLLHSYFVGESYSQSLVDPCVYTKHEENDMTIILVWVDDIIITTNRDSILEDVKRGLTSRFKMKDLGEISMFLGM 866
BLAST of mRNA_H-paniculata_contig49133.12087.1 vs. uniprot
Match: A0A2P6P3Z1_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6P3Z1_ROSCH) HSP 1 Score: 106 bits (264), Expect = 4.760e-24 Identity = 57/153 (37.25%), Postives = 88/153 (57.52%), Query Frame = 0
Query: 2 STLRTVFSLAAEHDFELEGMDVDAVYWNAPVEEELFVKQPPEFSPFSRDVPFVRRLRKSLYGLKQSDRNWNNTLDDFLVGIGLDRSTTDSCLHFSRDEGGETNLLVV--------------LEDLKHNISQRFRMKDLGSLPRVLGIEVRRGR 140
+++R + S+AA++D E+E MDV + + +EE++++ QP F ++ V RLRKSLYGLKQS R W D +++ IG R D C+++ E GE LL++ +E+LK + F MKDLG+ +LGIE+RR R
Sbjct: 74 TSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKE-DLVCRLRKSLYGLKQSPRQWYKRFDTYMLKIGYTRCLYDCCVYYHVFEDGEIILLLLYVDDMLIACKDMSKIEELKKKLGAEFDMKDLGAAQNILGIEIRRDR 225
BLAST of mRNA_H-paniculata_contig49133.12087.1 vs. uniprot
Match: A0A7D9L0S1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9L0S1_PARCT) HSP 1 Score: 101 bits (251), Expect = 7.420e-24 Identity = 56/142 (39.44%), Postives = 83/142 (58.45%), Query Frame = 0
Query: 1 MSTLRTVFSLAAEHDFELEGMDVDAVYWNAPVEEELFVKQPPEFSPFSRDVPF-VRRLRKSLYGLKQSDRNWNNTLDDFLVGIGLDRSTTDSCLHFSRDEGGET-------------NLLVVLEDLKHNISQRFRMKDLGSL 128
M+++R + LA +++ + MDV Y NAP++ EL+V+QP F+ +D + V +LRKSLYGLKQS RNWN+ L LV G +S +DSC++ T N V L ++K N+S+RF+MKD+G L
Sbjct: 71 MTSIRILMQLAMQYNLTIHQMDVKTAYLNAPIDCELYVEQPEGFTMTGKDGEYLVYKLRKSLYGLKQSGRNWNSVLHSHLVSEGFIQSQSDSCVYTKISGKSMTIVIIWVDDIIIASNCTVTLTNVKGNLSKRFQMKDMGKL 212
BLAST of mRNA_H-paniculata_contig49133.12087.1 vs. uniprot
Match: A0A3L6PRB6_PANMI (Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6PRB6_PANMI) HSP 1 Score: 105 bits (263), Expect = 9.770e-24 Identity = 57/152 (37.50%), Postives = 84/152 (55.26%), Query Frame = 0
Query: 2 STLRTVFSLAAEHDFELEGMDVDAVYWNAPVEEELFVKQPPEFSPFSRDVPFVRRLRKSLYGLKQSDRNWNNTLDDFLVGIGLDRSTTDSCLHFSRDEGGETNLLVVLED-------------LKHNISQRFRMKDLGSLPRVLGIEVRRGR 140
S +RT FS+ A HD ELE +DV + + +EE++++ QP F ++ FV L++SLYGLKQS R WN D F++ G RS DSC++ G LL+ ++D LK +S F MKDLG+ ++ G+E+ R R
Sbjct: 516 SFVRTFFSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEK-FVCELKRSLYGLKQSPRQWNKRFDSFMLSHGFKRSKFDSCVYIKHVNGSPIYLLLYVDDILIATKSKVEITKLKKLLSSEFDMKDLGAAKKIFGMEITRDR 666
BLAST of mRNA_H-paniculata_contig49133.12087.1 vs. uniprot
Match: A0A6S7HLY2_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HLY2_PARCT) HSP 1 Score: 105 bits (262), Expect = 1.250e-23 Identity = 57/155 (36.77%), Postives = 92/155 (59.35%), Query Frame = 0
Query: 1 MSTLRTVFSLAAEHDFELEGMDVDAVYWNAPVEEELFVKQPPEFSPFSRD-VPFVRRLRKSLYGLKQSDRNWNNTLDDFLVGIGLDRSTTDSCLHFSRDEGGETNLLVVL--EDL-------------KHNISQRFRMKDLGSLPRVLGIEVRRG 139
++++R + LAA+++ + MDV + + P++ E+F++QP F S + V V RL+KSLYGLKQS RNWN LD++L+ G R+ D C++ + + GE ++VV+ +DL K N+ +FRMKDLG + LGI ++G
Sbjct: 259 ITSIRILMQLAAQYNLTVHQMDVKTAFLHVPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFIRNPVDHCVY--QKQTGEDIIIVVIWVDDLIIASSNTDKISQFKENMKSKFRMKDLGEISYFLGISFKQG 411 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig49133.12087.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig49133.12087.1 ID=prot_H-paniculata_contig49133.12087.1|Name=mRNA_H-paniculata_contig49133.12087.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=145bpback to top |