prot_H-paniculata_contig4911.12084.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4911.12084.1
Unique Nameprot_H-paniculata_contig4911.12084.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length269
Homology
BLAST of mRNA_H-paniculata_contig4911.12084.1 vs. uniprot
Match: A0A6H5KZ71_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZ71_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 1.660e-72
Identity = 113/165 (68.48%), Postives = 136/165 (82.42%), Query Frame = 0
Query:  104 PVSTTGTRSSTRDRVVPSSRKLVHGEIAQRSLVKALIWRVTAAAVTLVSSLLYSGSLATAMSIVGSDFVTKSGTMFLGERVWNKVTWGQENAGDSAKRSLAKAILWRIFAASNTLICGIFLAKDLGVASKIAGTDTIFKTALFYVNERIWASVKWGKKYDPEYFI 268
            P+  T     T + + P+   LV+GE A RS VKAL+WR+TA  VTLVS L++SGSLATAMSIVGSDFVTKSG MF GER+WNKV WGQ+ +GDS KRSLAKA+LWR+FAASNTLICG+FLAKDL VASKIAGTDT+FKTALF++NER W  + WGK+Y+PEY++
Sbjct:   84 PLPETPDAPPTTEELRPA---LVYGESAARSFVKALVWRLTAGVVTLVSGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKIDWGKEYEPEYYL 245          
BLAST of mRNA_H-paniculata_contig4911.12084.1 vs. uniprot
Match: A0A836CRK4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRK4_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.330e-61
Identity = 103/161 (63.98%), Postives = 124/161 (77.02%), Query Frame = 0
Query:  111 RSSTRDRVVP---SSRKLVHGEIAQRSLVKALIWRVTAAAVTLVSSLLYSGSLATAMSIVGSDFVTKSGTMFLGERVWNKVTWGQENAGDSAKRSLAKAILWRIFAASNTLICGIFLAKDLGVASKIAGTDTIFKTALFYVNERIWASVKWGKKYDPEYFI 268
            RSS +D   P   + + L   E   RSL KA++WRVTAA +TL+S L++S +L TA SIVGSDFVTKSG MFLGERVWNKV WG+    D AKRSLAKA+LWR+FAA NTLICG FLA DL VA KIAG+DT+FKT LFY+NER+WA V+WGK+Y+ E+ I
Sbjct:   87 RSSPQDTSTPPTDTGKALYFTETTMRSLAKAVVWRVTAAVITLISGLVFSKNLKTAASIVGSDFVTKSGFMFLGERVWNKVNWGKGAKTDGAKRSLAKALLWRVFAAGNTLICGAFLAGDLSVALKIAGSDTVFKTFLFYINERMWARVEWGKEYEIEFVI 247          
BLAST of mRNA_H-paniculata_contig4911.12084.1 vs. uniprot
Match: A0A835YMA1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMA1_9STRA)

HSP 1 Score: 193 bits (490), Expect = 9.800e-59
Identity = 94/146 (64.38%), Postives = 112/146 (76.71%), Query Frame = 0
Query:  123 RKLVHGEIAQRSLVKALIWRVTAAAVTLVSSLLYSGSLATAMSIVGSDFVTKSGTMFLGERVWNKVTWGQENAGDSAKRSLAKAILWRIFAASNTLICGIFLAKDLGVASKIAGTDTIFKTALFYVNERIWASVKWGKKYDPEYFI 268
            + L   E   RSL KA++WRV AA +TL S L++S +L  A SIVGSDFVTKSG MFLGER WNKV WG+    D AKRSLAKA+LWR+FA  NTLICG FLA DL VA KIAG+DT+FKT LFY+NER+WA V+WGK+YD ++ I
Sbjct:   14 KALYFTETTMRSLAKAIVWRVAAAVITLASGLVFSKNLRMAASIVGSDFVTKSGFMFLGERAWNKVNWGKGAKTDGAKRSLAKALLWRVFATGNTLICGAFLAGDLSVALKIAGSDTVFKTILFYINERMWARVEWGKEYDADFVI 159          
BLAST of mRNA_H-paniculata_contig4911.12084.1 vs. uniprot
Match: A0A7S2UXG1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXG1_9STRA)

HSP 1 Score: 173 bits (438), Expect = 5.720e-50
Identity = 88/196 (44.90%), Postives = 129/196 (65.82%), Query Frame = 0
Query:   82 SVVSRTQREINGDRIEMPS--LPAPVSTTGTRSSTRDRVVPSSRKLVHGEIAQRSLVKALIWRVTAAAVTLVSSLLYSGSLATAMSIVGSDFVTKSGTMFLGERVWNKVTWGQ-------ENAGDSAKRSLAKAILWRIFAASNTLICGIFLAKDLGVASKIAGTDTIFKTALFYVNERIWASVKWGKKYDPEYFI 268
            S+  +T   +    +  P+  +P P S      + R     ++ ++   E  +RS+VKAL+WR+TA  +T ++S ++SG L+TA  IVG DFV+K+G M++GERVW+KV WG+       + A DS  RSL KA++WR FAA+NTL+   F+AKD+ +A KIA +DT+FKT LFY+NERIW+ V+WGK+Y  EY I
Sbjct:   32 SIARQTSHHVFTSPVLSPNSFVPKPFSPLIKAENLRPLQASAAPEVPFTETNKRSIVKALLWRLTAGIITFITSFIFSGDLSTAAKIVGGDFVSKAGFMYVGERVWSKVNWGRTKGNKDSKTAMDSKSRSLTKALVWRAFAATNTLVMSFFMAKDVSIAGKIASSDTVFKTFLFYINERIWSRVEWGKEYQLEYNI 227          
BLAST of mRNA_H-paniculata_contig4911.12084.1 vs. uniprot
Match: A0A7R9ZQP1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQP1_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.800e-48
Identity = 85/140 (60.71%), Postives = 104/140 (74.29%), Query Frame = 0
Query:  129 EIAQRSLVKALIWRVTAAAVTLVSSLLYSGSLATAMSIVGSDFVTKSGTMFLGERVWNKVTWGQENAGDSAKRSLAKAILWRIFAASNTLICGIFLAKDLGVASKIAGTDTIFKTALFYVNERIWASVKWGKKYDPEYFI 268
            E   RS VKA  WR+ A AVT  +SL +SGSLATA+SIVGSDF +KS TMF+GER+ NK   G+   GD A RSLAKA++WR+FA  NTL   IF+AKD+ +ASKIAG+D IFKTAL +  ER WA V+WGK+YDP + I
Sbjct:   42 ETTARSAVKAFAWRIIAGAVTFFTSLRFSGSLATALSIVGSDFFSKSFTMFIGERLMNKSNAGRTAGGDGAGRSLAKALIWRLFAICNTLTMAIFVAKDISIASKIAGSDAIFKTALMFFYERAWAKVEWGKEYDPGFSI 181          
BLAST of mRNA_H-paniculata_contig4911.12084.1 vs. uniprot
Match: A0A7R9ZQR0_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQR0_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.700e-47
Identity = 85/140 (60.71%), Postives = 104/140 (74.29%), Query Frame = 0
Query:  129 EIAQRSLVKALIWRVTAAAVTLVSSLLYSGSLATAMSIVGSDFVTKSGTMFLGERVWNKVTWGQENAGDSAKRSLAKAILWRIFAASNTLICGIFLAKDLGVASKIAGTDTIFKTALFYVNERIWASVKWGKKYDPEYFI 268
            E   RS VKA  WR+ A AVT  +SL +SGSLATA+SIVGSDF +KS TMF+GER+ NK   G+   GD A RSLAKA++WR+FA  NTL   IF+AKD+ +ASKIAG+D IFKTAL +  ER WA V+WGK+YDP + I
Sbjct:  134 ETTARSAVKAFAWRIIAGAVTFFTSLRFSGSLATALSIVGSDFFSKSFTMFIGERLMNKSNAGRTAGGDGAGRSLAKALIWRLFAICNTLTMAIFVAKDISIASKIAGSDAIFKTALMFFYERAWAKVEWGKEYDPGFSI 273          
BLAST of mRNA_H-paniculata_contig4911.12084.1 vs. uniprot
Match: A0A1E7EW78_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EW78_9STRA)

HSP 1 Score: 164 bits (416), Expect = 3.260e-47
Identity = 79/140 (56.43%), Postives = 108/140 (77.14%), Query Frame = 0
Query:  129 EIAQRSLVKALIWRVTAAAVTLVSSLLYSGSLATAMSIVGSDFVTKSGTMFLGERVWNKVTWGQENAGDSAKRSLAKAILWRIFAASNTLICGIFLAKDLGVASKIAGTDTIFKTALFYVNERIWASVKWGKKYDPEYFI 268
            E   RS VKAL+WRV A +VT ++SL +SGS+ TA++IVGSDF++K+ TMF+GER+ NK   G+E+  D A RSL KA++WR+FA  NTL   IF+AKD+ +ASKIAG+D IFKT L +V ER+WA ++WGK+Y  ++FI
Sbjct:   46 ETTARSAVKALMWRVIAGSVTFITSLRFSGSMKTALTIVGSDFLSKAFTMFIGERLMNKSNAGRESGADGAGRSLMKALVWRLFAICNTLTMAIFIAKDITMASKIAGSDAIFKTGLMFVYERVWAKIEWGKEYQVDFFI 185          
BLAST of mRNA_H-paniculata_contig4911.12084.1 vs. uniprot
Match: A0A448ZGE6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGE6_9STRA)

HSP 1 Score: 166 bits (420), Expect = 7.050e-47
Identity = 81/138 (58.70%), Postives = 107/138 (77.54%), Query Frame = 0
Query:  129 EIAQRSLVKALIWRVTAAAVTLVSSLLYSGSLATAMSIVGSDFVTKSGTMFLGERVWNKVTWGQENAGDSAKRSLAKAILWRIFAASNTLICGIFLAKDLGVASKIAGTDTIFKTALFYVNERIWASVKWGKKYDPEY 266
            E   RS VKAL+WRV A +VT ++S  +SGS+ATA+SIVGSDF++KS TMF+GER+ NK   G+++  D A RSL KA++WR+FA  NTL   IF+AKD+ +ASKIAG+D IFKTAL +V ER+WA ++WGK+Y  EY
Sbjct:  119 ETTGRSAVKALMWRVIAGSVTFITSFKFSGSVATALSIVGSDFLSKSFTMFIGERLMNKSQAGRKSGADGAGRSLMKALVWRLFAICNTLTMAIFIAKDISIASKIAGSDAIFKTALMFVYERVWAKIEWGKEYQVEY 256          
BLAST of mRNA_H-paniculata_contig4911.12084.1 vs. uniprot
Match: A0A7S1Y2U4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y2U4_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.760e-45
Identity = 80/140 (57.14%), Postives = 105/140 (75.00%), Query Frame = 0
Query:  129 EIAQRSLVKALIWRVTAAAVTLVSSLLYSGSLATAMSIVGSDFVTKSGTMFLGERVWNKVTWGQENAGDSAKRSLAKAILWRIFAASNTLICGIFLAKDLGVASKIAGTDTIFKTALFYVNERIWASVKWGKKYDPEYFI 268
            E   RS VKA  WR+ A +VT V+SL +SGSL TA++IVGSDF +K+ TMF+GER+ NK   G++   D  KRSLAKA+LWR+FA +NTL   +F+AKDL +ASKIAG+D IFKTAL +  ER+WA ++WGK+Y  E+ I
Sbjct:  111 ETTGRSAVKAFCWRLIAGSVTFVTSLRFSGSLKTALTIVGSDFFSKAFTMFIGERLMNKSNAGRKGGADDVKRSLAKALLWRLFAIANTLTMAVFIAKDLSMASKIAGSDAIFKTALMFGYERVWAKIEWGKEYQVEFSI 250          
BLAST of mRNA_H-paniculata_contig4911.12084.1 vs. uniprot
Match: K0SBC5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBC5_THAOC)

HSP 1 Score: 160 bits (405), Expect = 1.050e-44
Identity = 78/140 (55.71%), Postives = 106/140 (75.71%), Query Frame = 0
Query:  129 EIAQRSLVKALIWRVTAAAVTLVSSLLYSGSLATAMSIVGSDFVTKSGTMFLGERVWNKVTWGQENAGDSAKRSLAKAILWRIFAASNTLICGIFLAKDLGVASKIAGTDTIFKTALFYVNERIWASVKWGKKYDPEYFI 268
            E  QRSLVK+++WRV A +VT  +SL +SG+++TA+SIVGSDF +K+ TMF+GER+ NK   G++   D   RSLAKA+LWR+FA +NTL    F+AKDL +ASKIAG+D IFKT L +  ER+WA ++WGK+Y  E+ I
Sbjct:  113 ETTQRSLVKSMMWRVIAGSVTFFTSLRFSGNISTALSIVGSDFFSKAATMFVGERLMNKSQAGRKGGADDLGRSLAKALLWRLFAIANTLTMSYFIAKDLSMASKIAGSDAIFKTGLMFAYERVWAKIEWGKEYIIEFSI 252          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4911.12084.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZ71_9PHAE1.660e-7268.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CRK4_9STRA1.330e-6163.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YMA1_9STRA9.800e-5964.38Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S2UXG1_9STRA5.720e-5044.90Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9ZQP1_9STRA1.800e-4860.71Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7R9ZQR0_9STRA2.700e-4760.71Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A1E7EW78_9STRA3.260e-4756.43Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A448ZGE6_9STRA7.050e-4758.70Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S1Y2U4_9STRA1.760e-4557.14Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
K0SBC5_THAOC1.050e-4455.71Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018638Domain of unknown function DUF2061, membranePFAMPF09834DUF2061coord: 203..254
e-value: 2.9E-13
score: 50.1
coord: 135..186
e-value: 6.2E-12
score: 45.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..268
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..43
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4911contigH-paniculata_contig4911:6413..11796 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4911.12084.1mRNA_H-paniculata_contig4911.12084.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4911 6100..13815 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4911.12084.1 ID=prot_H-paniculata_contig4911.12084.1|Name=mRNA_H-paniculata_contig4911.12084.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=269bp
MIMKRSAGKTRNTTMLVVGVFFVLLSVVSQVQSFIALPATSAATRLPRRF
SSSTRCNRSMGIVTLWCSRDECAKDKRGSILSVVSRTQREINGDRIEMPS
LPAPVSTTGTRSSTRDRVVPSSRKLVHGEIAQRSLVKALIWRVTAAAVTL
VSSLLYSGSLATAMSIVGSDFVTKSGTMFLGERVWNKVTWGQENAGDSAK
RSLAKAILWRIFAASNTLICGIFLAKDLGVASKIAGTDTIFKTALFYVNE
RIWASVKWGKKYDPEYFI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018638DUF2061_membrane