prot_H-paniculata_contig4906.12069.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4906.12069.1
Unique Nameprot_H-paniculata_contig4906.12069.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length436
Homology
BLAST of mRNA_H-paniculata_contig4906.12069.1 vs. uniprot
Match: A0A6H5JAP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAP1_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 1.660e-56
Identity = 220/377 (58.36%), Postives = 250/377 (66.31%), Query Frame = 0
Query:   13 GQEWGTHLAKRMMETERKRPRQREAEGVSNSLAELPPLIHEVQLQTQKLAELEPNELWELTRKCHLFRSLDLSGWEGVSVLAFRSLGLAVGASLESVNLSRTDISNEMLEIFAARLFSLRTINLTSCHKVSNLGVRALAEYCKSTLTGVDLSNCTNLNDEASAVAYLGGAIGFGSCCGLLQSLALADCKRMSDAALLVLAKGCPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGAKQASAVXXXXXXXXXXXXXXXXXXXXXXCVEVGLGGLHGLINGIGEAYVREAKTFFGFIPRRSMIDRRIEESQKAIEGAAATVIQ 389
            G EWGT LAKRMM TER+ P++REAE V  +LAE+PP + EV+L+  KL  L+P EL ELTRKCHLF S+DLSGW+GV +L+FRSL LAVG SL++V+LSRT+ +NEML +FAARLF LRTINLTSC +V+  GV+ +A                                                             +GCP++   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                          AGAK+AS VXXXXXXXXXXXXXXXXXXXXXX VEVGL GLHGLI G+G A V+EAKTFFGFIP+RSMIDRRIEES KAIE AA   IQ
Sbjct:    2 GPEWGTLLAKRMMSTERRPPKEREAEKVRIALAEIPPTLQEVKLKQHKLGGLDPKELSELTRKCHLFGSIDLSGWKGVRLLSFRSLCLAVGGSLQTVDLSRTETTNEMLGVFAARLFCLRTINLTSCRQVTTKGVQYIA-------------------------------------------------------------RGCPNMSVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------AGAKEAS-VXXXXXXXXXXXXXXXXXXXXXXXVEVGLAGLHGLIEGVGPALVQEAKTFFGFIPQRSMIDRRIEESHKAIELAAVRAIQ 290          
BLAST of mRNA_H-paniculata_contig4906.12069.1 vs. uniprot
Match: A0A836CJ55_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ55_9STRA)

HSP 1 Score: 167 bits (422), Expect = 3.250e-41
Identity = 95/206 (46.12%), Postives = 131/206 (63.59%), Query Frame = 0
Query:   13 GQEWGTHLAKRMMETERKRPRQREAEGVSNSLAELPPLIHEVQLQTQKLAELEPNELWELTRKCHLFRSLDLSGWEGVSVLAFRSLGLAVGASLESVNLSRTDISNEMLEIFAARLFSLRTINLTSCHKVSNLGVRALAEYCKSTLTGVDLSNCTNLNDEASAVAYLGGAIGFGSCCGLLQSLALADCKRMSDAALLVLAKGCPSL 218
            G ++G  LAKRMM  E +  +Q E   V  +LA+LP  + +++     + EL   ELWE+ RK H+F S +LSGW G+S  A RSL L  GASLE+V+LSRT +++  LE+  ARLF++RT+ L +C  V+NLG+RA++E C +TLT +D+S C  +N E   +A++GGAIGFG  C  LQSL L          L  LA GCP L
Sbjct:   13 GPKFGLLLAKRMMTAEARLHKQVETAVVRAALADLPASLRDLEFVGTGMEELREGELWEVLRKGHIFVSANLSGWRGISSGALRSLALNTGASLETVDLSRTGVADAQLEVLCARLFAIRTLRLAACRTVTNLGLRAVSELCGATLTALDVSACAGINSEG--LAWIGGAIGFGGGCAHLQSLNL---------GLTALAAGCPRL 207          
BLAST of mRNA_H-paniculata_contig4906.12069.1 vs. uniprot
Match: D7FGX1_ECTSI (Hypothetical leucine rich repeat calmodulin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX1_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 3.110e-26
Identity = 153/299 (51.17%), Postives = 176/299 (58.86%), Query Frame = 0
Query:  141 KVSNLGVRALAEYCKSTLTGVDLSNCTNLNDEASA--VAYLGGAIGFGSCCGLLQSLALADCKRMSDAALLVLAKGCPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGAKQASAVXXXXXXXXXXXXXXXXXXXXXXCVEVGLGGLHGLINGIGEAYVREAKTFFGFIPRRSMIDRR-IEESQKAIEGAAATVIQEYWHRYKKRRAEALRTEHAQEDKAAHKIQAAFYRYRKKVSQWQTYLM 436
            +++NLGVRAL EYCKSTLT VDLS+CT LNDE +   V Y+         C  +  L L  C ++ + AL+ L+K                                                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXXXX    GL GLHGLI G+G + V+EAKTFFGFIP+RSMIDRR IEES KAIE AA   IQ  W RYKKR A+ALR  +AQ + A   IQAA+YRY KK+  W+T L+
Sbjct:    3 QLNNLGVRALVEYCKSTLTSVDLSDCTGLNDEVTTKGVQYIARG------CPNMSVLNLYHCGKVKNGALIALSKX-------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAGLHGLIEGVGPSLVQEAKTFFGFIPQRSMIDRRRIEESHKAIELAAVLAIQRCWRRYKKRLADALRAAYAQAEAAVCTIQAAYYRYHKKLVWWETRLL 240          
BLAST of mRNA_H-paniculata_contig4906.12069.1 vs. uniprot
Match: A0A7S1TS02_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TS02_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.690e-14
Identity = 54/159 (33.96%), Postives = 87/159 (54.72%), Query Frame = 0
Query:   64 LEPNELWEL--TRKCHLFRSLDLSGWEGVSVLAFRSLGLAVGASLESVNLSRTDISNEMLEIFAARLFSLRTINLTSCHKVSNLGVRALAEYCKSTLTGVDLSNCTNLNDEASAVAY--LGGAIGFGSCCGLLQSLALADCKRMSDAALLVLAKGCPSL 218
            L  +E+WEL  +R+C   + ++LSGW   +  A RS+ LA+GA LE ++LS++ IS+ M++ F  RLFSLR ++   C  ++N  V  +A  C + L  + LS                +G +   GS C  L+++++  C  ++D  L  LAKGC  L
Sbjct:   62 LNEDEIWELVSSRECRGKQEINLSGWVNPTSGALRSIALALGAGLEKIDLSKSYISDAMVQGFVVRLFSLRHVSFAGCPYITNAAVSTIAGTCSACLESIVLSXXXXXXXXXXXXXXXXIGAS---GSPCVKLRAISVERCVLVNDDGLKSLAKGCKKL 217          
BLAST of mRNA_H-paniculata_contig4906.12069.1 vs. uniprot
Match: A0A4Y2DS88_ARAVE (Lysine-specific demethylase 2B n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2DS88_ARAVE)

HSP 1 Score: 60.5 bits (145), Expect = 3.840e-6
Identity = 46/148 (31.08%), Postives = 70/148 (47.30%), Query Frame = 0
Query:   73 TRKCHLFRSLDLSGWEGVSVLAFRSL---------GLAVGAS----LESVNLSRTDISNEMLEIFAARLFSLRTINLTSCHKVSNLGVRALAEYCKSTLTGVDLSNCTNLNDEASAVAYLGGAIGFGSCCGLLQSLALADCKRMSDAA 207
            T  C L RSLDLS  EG++    R L         G   G +    L  V L+  DIS+  + + A  L  L  I+L+ CHKV+++G+  L     + L  +D+S+C+N+ D +               C  L  L L DC ++++AA
Sbjct:  442 TCNCPLLRSLDLSWVEGLNDSVIRDLLSPPPDSRPGFIEGKTRLRHLTEVKLAGADISDVSVRLLAHHLPLLSKIDLSHCHKVTDMGIAVLGAAKATRLHSLDVSSCSNITDTSLEALKR---------CTNLAHLDLRDCGQVTEAA 580          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4906.12069.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JAP1_9PHAE1.660e-5658.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJ55_9STRA3.250e-4146.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FGX1_ECTSI3.110e-2651.17Hypothetical leucine rich repeat calmodulin bindin... [more]
A0A7S1TS02_9STRA1.690e-1433.96Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A4Y2DS88_ARAVE3.840e-631.08Lysine-specific demethylase 2B n=1 Tax=Araneus ven... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 322..347
e-value: 68.0
score: 8.0
coord: 76..101
e-value: 390.0
score: 2.1
coord: 155..182
e-value: 710.0
score: 0.1
coord: 241..266
e-value: 0.13
score: 21.3
coord: 189..214
e-value: 0.078
score: 22.1
coord: 293..321
e-value: 89.0
score: 7.2
coord: 215..240
e-value: 3.5E-4
score: 29.9
coord: 128..153
e-value: 0.049
score: 22.8
coord: 267..292
e-value: 0.66
score: 19.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 29..344
e-value: 8.7E-51
score: 174.8
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 215..238
e-value: 0.077
score: 13.1
coord: 130..151
e-value: 1.0
score: 9.6
NoneNo IPR availablePANTHERPTHR13382:SF6SCF E3 UBIQUITIN LIGASE COMPLEX F-BOX PROTEIN GRR1coord: 264..341
coord: 51..275
NoneNo IPR availablePANTHERPTHR13382MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR Bcoord: 264..341
coord: 51..275
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 72..334

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4906contigH-paniculata_contig4906:202..6774 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4906.12069.1mRNA_H-paniculata_contig4906.12069.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4906 202..7125 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4906.12069.1 ID=prot_H-paniculata_contig4906.12069.1|Name=mRNA_H-paniculata_contig4906.12069.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=436bp
MEFHRGILGLDKGQEWGTHLAKRMMETERKRPRQREAEGVSNSLAELPPL
IHEVQLQTQKLAELEPNELWELTRKCHLFRSLDLSGWEGVSVLAFRSLGL
AVGASLESVNLSRTDISNEMLEIFAARLFSLRTINLTSCHKVSNLGVRAL
AEYCKSTLTGVDLSNCTNLNDEASAVAYLGGAIGFGSCCGLLQSLALADC
KRMSDAALLVLAKGCPSLRFLNLSGCGKVTTRGIKHIARGCPKMAVLNLY
HCGKVQDGALISLAKCCTGLVSLNIALVGRITDAGVSALSRGCPCLQALN
LAGAKQASAVTERGVCSLAQHCPGLHTLNLTGCVEVGLGGLHGLINGIGE
AYVREAKTFFGFIPRRSMIDRRIEESQKAIEGAAATVIQEYWHRYKKRRA
EALRTEHAQEDKAAHKIQAAFYRYRKKVSQWQTYLM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt