prot_H-paniculata_contig4895.12048.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4895.12048.1
Unique Nameprot_H-paniculata_contig4895.12048.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length405
Homology
BLAST of mRNA_H-paniculata_contig4895.12048.1 vs. uniprot
Match: A0A6H5KQB6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KQB6_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 1.390e-42
Identity = 83/166 (50.00%), Postives = 106/166 (63.86%), Query Frame = 0
Query:  241 GWETPRTLVLGQ-AQSAHVRTAQFQYYSLIWETCQGKPLNETSQHAPVTWEPVSITLTPTSGGSQDMYVTMNRSREPGPNDYDIKGSNWGGSLRILIPEAFTRNCLQCTVYVSAYGFKGGDYSIVASKGLTRLKEGFPQQGTLGGSTLAQFYEFYNPPGEGDSLQV 405
            GW  P+ L+LG   QS+ +    F YY+L+        +    +  P  WE + +T TPT GG QD+Y T NRSREPGP DYD+K SNW GS  ++  E     C  CT+YV  YG+K G YSIVAS+GLTRL+EGFPQQG +GG    ++YEF+NPPG G S+QV
Sbjct:   15 GWRHPQQLLLGNHPQSSFLVEGNFDYYALL--------ITPAPEENP--WESIVVTTTPTGGGQQDLYATTNRSREPGPEDYDVKSSNWVGSSTLVFSETAPGFCTDCTIYVGVYGYKKGGYSIVASQGLTRLQEGFPQQGLVGGEDDWKYYEFFNPPGHGKSIQV 170          
BLAST of mRNA_H-paniculata_contig4895.12048.1 vs. uniprot
Match: A0A6H5KRK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRK9_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 1.980e-35
Identity = 66/138 (47.83%), Postives = 93/138 (67.39%), Query Frame = 0
Query:    8 VGNECPVAQPCRLEMGEAFGDPWVKSGAMDVKYFQVIATPQMYPSEVIATTMCGGKVEMYASSQGRTPSQEAHDWKGGNIVRLTGWPIPTGNETLTIMVVSPDDAS--YRLLASSMDNILQLQDGRSVEMIQDKGTMR 143
            VG  CPVA PC+LEMG AFGD W+++   ++ YF+V  TPQ+ PSEVI T +  G VE YASS GR P+    DW GG ++RL GW +P   +T+ +M+ +   A   YR+LA+S +++L+L+DG  V+M+QD   MR
Sbjct:   48 VGLRCPVAVPCKLEMGTAFGDTWLRAEDGEIAYFEVAGTPQVQPSEVIVT-LAYGDVETYASSSGREPTPSESDWSGGRVLRLPGWSVPHEGDTVVVMIKATGTAGALYRVLAASDEDVLRLEDGMPVQMLQDASEMR 184          
BLAST of mRNA_H-paniculata_contig4895.12048.1 vs. uniprot
Match: A0A7S1XNZ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNZ0_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.440e-22
Identity = 78/304 (25.66%), Postives = 147/304 (48.36%), Query Frame = 0
Query:  102 LTIMVVSPDD-ASYRLLASSMDN-ILQLQDGRSVEMIQDKGTMRYFSIDVTDSTTDLSLAANPIYGDPDIYVS--PIDASGRTRPNIHNFEWHSLSFGEDTLEIQAEEMSKLCIPSDKHICTYVVGISAGSDCSYFIQASLNHGWETPRTLVLGQAQSAHVRTAQFQYYSLIWETCQGKPLNETSQHAPVTWEPVSITLTPTSGGSQDMYVTMNRSREPGPNDYDIKGSNWGGSLRILIPEAFTRNCLQCTVYVSAYGFKGGDYSIVASKGLTRLKEGFPQQGTLGGSTLAQFYEFYNPPGEGD 401
            + + V++P   A Y ++A  MD+ I+ LQ G  +     +GT  Y+   +   + DL ++ +   GD D+YV+  P+      RPN    + HS++F  D + +Q+ E+++ C P       Y+       +  Y I  S+N GW +P +L+ GQA ++ V T +++Y+          P+ +++         +  TL        D+Y+ M    +PG + +D +  +  G+  + +       C  C   ++ YG+ GG+++I AS+GL+ L++G P  G +     A +Y F+N   + D
Sbjct: 1295 IVVGVIAPTSGADYVIVAHPMDDTIVTLQTGVPLSNDVPEGTYHYYHYIIASPSVDLEISLSSTSGDADLYVAFPPL-----IRPNRTANDAHSVAFNTDVIVMQSSELAEKC-PESGSCDIYISVYGFRPNTQYSIVVSVNDGWNSPVSLLPGQAITSQVATNEYKYFVF-------HPMKQSA---------IIFTLMSGEDADSDLYI-MASDAQPGKDHHDFESVHAFGADIVEVRPEDDNYCTDCQYSIAVYGYVGGEFTISASEGLSELQDGVPISGRVSDDEYA-YYAFHNNDPDAD 1574          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4895.12048.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KQB6_9PHAE1.390e-4250.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KRK9_9PHAE1.980e-3547.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1XNZ0_9STRA1.440e-2225.66Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4895contigH-paniculata_contig4895:2719..13797 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4895.12048.1mRNA_H-paniculata_contig4895.12048.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4895 2719..13797 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4895.12048.1 ID=prot_H-paniculata_contig4895.12048.1|Name=mRNA_H-paniculata_contig4895.12048.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=405bp
AVPFTPQVGNECPVAQPCRLEMGEAFGDPWVKSGAMDVKYFQVIATPQMY
PSEVIATTMCGGKVEMYASSQGRTPSQEAHDWKGGNIVRLTGWPIPTGNE
TLTIMVVSPDDASYRLLASSMDNILQLQDGRSVEMIQDKGTMRYFSIDVT
DSTTDLSLAANPIYGDPDIYVSPIDASGRTRPNIHNFEWHSLSFGEDTLE
IQAEEMSKLCIPSDKHICTYVVGISAGSDCSYFIQASLNHGWETPRTLVL
GQAQSAHVRTAQFQYYSLIWETCQGKPLNETSQHAPVTWEPVSITLTPTS
GGSQDMYVTMNRSREPGPNDYDIKGSNWGGSLRILIPEAFTRNCLQCTVY
VSAYGFKGGDYSIVASKGLTRLKEGFPQQGTLGGSTLAQFYEFYNPPGEG
DSLQV
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