prot_H-paniculata_contig48102.11898.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig48102.11898.1
Unique Nameprot_H-paniculata_contig48102.11898.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length152
Homology
BLAST of mRNA_H-paniculata_contig48102.11898.1 vs. uniprot
Match: A0A6H5KEB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB2_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 1.940e-31
Identity = 55/66 (83.33%), Postives = 62/66 (93.94%), Query Frame = 0
Query:   65 LSCGLQVTVRIRGKKSREEDYTNQAYDEYVKRLRPVLALETQWHKTDEDLEAAVRKDTGIVVSYEK 130
            L+CGLQ+TVRIRGKKSREEDYTNQAYDEY KRLRPVLAL+TQWHKTD+DLEAAVRKD G+VV  ++
Sbjct:   60 LTCGLQITVRIRGKKSREEDYTNQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDE 125          
BLAST of mRNA_H-paniculata_contig48102.11898.1 vs. uniprot
Match: W7TG35_9STRA (Ribosomal rna large subunit methyltransferase h n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG35_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.630e-16
Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 0
Query:   66 SCGLQVTVRIRGKKSREEDYTNQAYDEYVKRLRPVLALETQWHKTDEDLEAAVRKDTGIVVSYEK 130
            +CGLQVT+ IRGK+S  E++ N AY EY KRLRPVL L T WHKTD +LEAA+ K+   V+  ++
Sbjct:   68 ACGLQVTIHIRGKRSGGEEFLNDAYLEYTKRLRPVLGLTTVWHKTDSELEAAIAKEKAPVICLDE 132          
BLAST of mRNA_H-paniculata_contig48102.11898.1 vs. uniprot
Match: D7FIP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIP1_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 3.220e-14
Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 0
Query:   86 TNQAYDEYVKRLRPVLALETQWHKTDEDLEAAVRKDTGIVVSYEK 130
            + QAYDEY KRLRPVLAL+TQWHKTD+DLEAAVRKD G+VV  ++
Sbjct:   60 SKQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDE 104          
BLAST of mRNA_H-paniculata_contig48102.11898.1 vs. uniprot
Match: A0A7S2UUR8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUR8_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 2.550e-13
Identity = 36/90 (40.00%), Postives = 56/90 (62.22%), Query Frame = 0
Query:   41 APRRLAERSCCKERIGRPENGVDSLSCGLQVTVRIRGKKSREEDYTNQAYDEYVKRLRPVLALETQWHKTDEDLEAAVRKDTGIVVSYEK 130
            +P R+  R+        P+ G   ++CGL+VT+ IRGKKS  ED+ +   DEY KRLR  L L+T+W+K D  L   V+K+ G++V+ ++
Sbjct:   31 SPERIISRA--------PKRGF--MTCGLEVTIHIRGKKSGGEDWISTGIDEYQKRLRSTLKLQTKWYKDDSALIQGVKKEKGVIVTLDE 110          
BLAST of mRNA_H-paniculata_contig48102.11898.1 vs. uniprot
Match: A0A7S2XIV0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIV0_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.940e-5
Identity = 36/109 (33.03%), Postives = 53/109 (48.62%), Query Frame = 0
Query:   52 KERIGRPENGV----DSLSCGLQVTVRIRGKKSREEDYTNQAYDEYVKRLRPV-LALETQWHKTDEDLEAAVRKDTG----IVVSYEKEKTRLFMRPDLRAYTNLRPHG 151
            + R     NGV     SL  G++V +RI G+K+  E +   AY  Y  RLRP  + +ET WHK D++L   V+ D+     +V+   + K R   +     YT L   G
Sbjct:   38 RSRTSLTTNGVRRSRSSLCMGMEVRIRIVGRKNGSEKWLEDAYSMYETRLRPSNIDVETIWHKNDQELIKGVKGDSDKGHTVVLLDPRGKPRTSEQFSENMYTWLDQGG 146          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig48102.11898.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KEB2_9PHAE1.940e-3183.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TG35_9STRA1.630e-1656.92Ribosomal rna large subunit methyltransferase h n=... [more]
D7FIP1_ECTSI3.220e-1475.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UUR8_9STRA2.550e-1340.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2XIV0_9STRA1.940e-533.03Hypothetical protein n=1 Tax=Attheya septentrional... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..151
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig48102contigH-paniculata_contig48102:223..1193 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig48102.11898.1mRNA_H-paniculata_contig48102.11898.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig48102 139..1338 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig48102.11898.1 ID=prot_H-paniculata_contig48102.11898.1|Name=mRNA_H-paniculata_contig48102.11898.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=152bp
MTWYTARAIVKLSFILLSCNGFSSSFIGHVKAPCTGCGWGAPRRLAERSC
CKERIGRPENGVDSLSCGLQVTVRIRGKKSREEDYTNQAYDEYVKRLRPV
LALETQWHKTDEDLEAAVRKDTGIVVSYEKEKTRLFMRPDLRAYTNLRPH
G*
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