prot_H-paniculata_contig4803.11888.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4803.11888.1
Unique Nameprot_H-paniculata_contig4803.11888.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length515
Homology
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BLAST of mRNA_H-paniculata_contig4803.11888.1 vs. uniprot
Match: A0A6H5L313_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L313_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 1.880e-36
Identity = 81/162 (50.00%), Postives = 105/162 (64.81%), Query Frame = 0 
Query:  338 GAEEKTCPYCGDESGSDVAKHLEECYQQVTAVRNARLGSATIRPPPFEEITAAFQARYTSLVG--MGLPPISGRAMADTSTVARQLLQRRIAYADFAALPDSGNFRLHRDLHGWTTSPSRLDLLHKELVRQRNVAMLELQTLERDEALLELKLRREWAHDDL 497
            G +  TC YCG+E+G  V++HLE CY++ TA+RN RL  AT+RP P             + V   + LPP +   +   + + RQLL RRIAYA+F +LPD   F+LH DL GW  SPSRLD L+KELVRQRN A+ ELQ L+R+EA LE+ LR +W  DDL
Sbjct: 1099 GVQNFTCVYCGEETGPRVSEHLERCYRKTTAMRNERLKHATLRPLPDNHFLQGGSRLGAASVTEPVSLPPSA--CLDSPAAIGRQLLSRRIAYANFDSLPDPSRFQLHHDLKGWRESPSRLDFLYKELVRQRNAAIYELQALDREEAELEVHLRHDWMKDDL 1258
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BLAST of mRNA_H-paniculata_contig4803.11888.1 vs. uniprot
Match: D8LQA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA3_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 2.160e-34
Identity = 79/162 (48.77%), Postives = 104/162 (64.20%), Query Frame = 0 
Query:  338 GAEEKTCPYCGDESGSDVAKHLEECYQQVTAVRNARLGSATIRPPPFEEITAAFQARYTSLVG--MGLPPISGRAMADTSTVARQLLQRRIAYADFAALPDSGNFRLHRDLHGWTTSPSRLDLLHKELVRQRNVAMLELQTLERDEALLELKLRREWAHDDL 497
            G +   C YCG+E+G  V++HLE CY++ TA+RN RL  AT+RP               + V   + +PP +  A+   + + RQLL RRIAYA+F +LPD   F+LH DL GW  SPSRLD L+KELVRQRN A+ ELQ L+R+EA LE+ LR +W  DDL
Sbjct: 1125 GVQNFMCVYCGEETGPWVSEHLERCYRKTTAMRNERLKHATLRPLRDNHFLQGGSRLGAASVTEPVSVPPSA--ALDSPAAIGRQLLSRRIAYANFDSLPDPSRFQLHHDLKGWRESPSRLDFLYKELVRQRNAAIYELQALDREEAELEVHLRHDWMKDDL 1284
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4803.11888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L313_9PHAE1.880e-3650.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQA3_ECTSI2.160e-3448.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 460..480

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4803contigH-paniculata_contig4803:3717..9023 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4803.11888.1mRNA_H-paniculata_contig4803.11888.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4803 3717..9024 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4803.11888.1 ID=prot_H-paniculata_contig4803.11888.1|Name=mRNA_H-paniculata_contig4803.11888.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=515bp
STDTPFGSRKSRDISDRATAASVDTEAKHLGDGVGMTAQEPAAAVGGGTS
VSTSLSHVADCPLASATTDNSNNNNNDYDDNGNGNGNGNGSGSGSGSRDN
NEADSGTIYSAGANDEPNAQLSSKGKNATALKETGAPNRSTVVTTATGTG
KRILPATDKHGGGIEVDVGVEQDANVACAEIGPAAAAQQQTSFTTLTAAA
PSNDAVTAPPAKRPRIGPELATNPRLPSPAVPAAAAAAPEASGAPVAPAV
VLMTPAAPATVPTTPVTLPVPRTLAASTTLTAPAIVPTISATPAAPAALV
APAVAQGVQARQREGGQAAQRQVEVLRVQLNSAVQRAGAEEKTCPYCGDE
SGSDVAKHLEECYQQVTAVRNARLGSATIRPPPFEEITAAFQARYTSLVG
MGLPPISGRAMADTSTVARQLLQRRIAYADFAALPDSGNFRLHRDLHGWT
TSPSRLDLLHKELVRQRNVAMLELQTLERDEALLELKLRREWAHDDLGGG
LSRIWKSTNSGTSNN
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